Gene Ontology annotation through association of InterPro records with GO terms
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Automatic assignment of GO terms using logical inference, based on on inter-ontology links
Combined Automated Annotation using Multiple IEA Methods
Endothelial nitric-oxide synthase antisense (NOS3AS) gene encodes an autophagy-related protein (APG9-like2) highly expressed in trophoblast.
Starvation and ULK1-dependent cycling of mammalian Atg9 between the TGN and endosomes.
Kinase-inactivated ULK proteins inhibit autophagy via their conserved C-terminal domains using an Atg13-independent mechanism.
Coordinated regulation of autophagy by p38alpha MAPK through mAtg9 and p38IP.
Defining the membrane proteome of NK cells.
Atg9A protein, an autophagy-related membrane protein, is localized in the neurons of mouse brains.
Mapping a dynamic innate immunity protein interaction network regulating type I interferon production.
Dynamic and transient interactions of Atg9 with autophagosomes, but not membrane integration, are required for autophagy.
Regulation of ATG4B stability by RNF5 limits basal levels of autophagy and influences susceptibility to bacterial infection.
TBC1D5 and the AP2 complex regulate ATG9 trafficking and initiation of autophagy.
A proteome-scale map of the human interactome network.
Molecular determinants that mediate the sorting of human ATG9A from the endoplasmic reticulum.
A conserved glycine residue in the C-terminal region of human ATG9A is required for its transport from the endoplasmic reticulum to the Golgi apparatus.
AP-4 mediates export of ATG9A from the trans-Golgi network to promote autophagosome formation.
SNX18 regulates ATG9A trafficking from recycling endosomes by recruiting Dynamin-2.
TOM40 Targets Atg2 to Mitochondria-Associated ER Membranes for Phagophore Expansion.
The FTS-Hook-FHIP (FHF) complex interacts with AP-4 to mediate perinuclear distribution of AP-4 and its cargo ATG9A.
A heterodimeric SNX4--SNX7 SNX-BAR autophagy complex coordinates ATG9A trafficking for efficient autophagosome assembly.
Structure, lipid scrambling activity and role in autophagosome formation of ATG9A.
Cytoplasmic short linear motifs in ACE2 and integrin β(3) link SARS-CoV-2 host cell receptors to mediators of endocytosis and autophagy.
The phosphatidylinositol 3-phosphate-binding protein SNX4 controls ATG9A recycling and autophagy.
A model for a partnership of lipid transfer proteins and scramblases in membrane expansion and organelle biogenesis.
C5orf51 is a component of the MON1-CCZ1 complex and controls RAB7A localization and stability during mitophagy.
Large scale discovery of coronavirus-host factor protein interaction motifs reveals SARS-CoV-2 specific mechanisms and vulnerabilities.
Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs.
Large-scale phosphomimetic screening identifies phospho-modulated motif-based protein interactions.