Gene Ontology annotation through association of InterPro records with GO terms
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
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PAINT/IBA phylogenetic-inference annotations propagate SNAP receptor activity, SNARE binding, endosome-to-Golgi/TGN retrograde transport, and Golgi/endosome localization from experimentally annotated VTI1-family SNAREs to VTI1A.
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
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Provides electronic Golgi apparatus, endosome, and TGN localizations for VTI1A from UniProt subcellular-location vocabulary, consistent with the experimental IDA evidence.
Automatic assignment of GO terms using logical inference, based on on inter-ontology links
Electronic Gene Ontology annotations created by ARBA machine learning models
Participation of the syntaxin 5/Ykt6/GS28/GS15 SNARE complex in transport from the early/recycling endosome to the trans-Golgi network.
A syntaxin 10-SNARE complex distinguishes two distinct transport routes from endosomes to the trans-Golgi in human cells.
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STX10, STX16, Vti1a, and VAMP3 form a SNARE-complex route required for MPR transport from endosomes/late endosomes to the TGN/Golgi.
Differential effects of depletion of ARL1 and ARFRP1 on membrane trafficking between the trans-Golgi network and endosomes.
VAMP1 mutation causes dominant hereditary spastic ataxia in Newfoundland families.
VAMP4 is required to maintain the ribbon structure of the Golgi apparatus.
Syntaxin 13, a genetic modifier of mutant CHMP2B in frontotemporal dementia, is required for autophagosome maturation.
RAB6:GTP binds the GARP and COG complexes, t-SNAREs and endosome-derived vesicles
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RAB6:GTP recruits the GARP tethering complex (VPS54/53/52/51) to the TGN, where GARP interacts with TGN SNAREs STX10 and STX16 and with a vesicle fraction containing the v-SNARE VAMP4; in the same pathway, the COG complex facilitates retrograde traffic in a STX6/STX16/VTI1A and VAMP4-dependent manner.
The COG tethering complex interacts with numerous SNAREs at the Golgi membrane
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The Golgi-localized COG tethering complex interacts with Golgi SNAREs STX6, STX16, GOSR1, GOSR2, BET1L, SNAP29, VPS45 and VTI1A during intra-Golgi and endosome-to-TGN retrograde vesicle capture.
Fusion of late-endosome derived vesicles at the TGN
Tethering of late endosome-derived vesicles by GARP, STX10:ST16:VTI1A and Golgins
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RAB9-positive late-endosome-derived vesicles are tethered at the TGN by GARP, the golgin GCC2, and the STX10/STX16/VTI1A t-SNARE complex — the primary Reactome step in which VTI1A directly participates.
SNAPs and NSF hexamer bind cis-SNARE at the TGN
ATP hydrolysis by NSF disassembles the cis-SNARE at the TGN
Fusion of early-endosome derived vesicles at the TGN
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Early-endosome-derived retrograde vesicles fuse at the TGN via a SNARE complex that includes VTI1A (with STX6, STX16, VAMP4), delivering cargo such as TGOLN2 and internalised toxins back to the Golgi.
NSF-dependent ATP hydrolysis disassembles the cis-SNARE at the TGN
cis-SNARE binds SNAPs and NSF hexamer at the TGN
A VAMP7/Vti1a SNARE complex distinguishes a non-conventional traffic route to the cell surface used by KChIP1 and Kv4 potassium channels.
UniProt entry for VTI1A (Q96AJ9)
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VTI1A is a VTI1-family SNARE involved in vesicle transport, lipid-bilayer fusion, late-endosome-to-TGN transport, and non-conventional cell-surface trafficking.
Local curation notes for VTI1A