Gene Ontology annotation through association of InterPro records with GO terms
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Electronic Gene Ontology annotations created by ARBA machine learning models
Combined Automated Annotation using Multiple IEA Methods
Beta-NAP, a cerebellar degeneration antigen, is a neuron-specific vesicle coat protein.
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AP3B2 (beta-NAP) is a neuron-specific vesicle coat protein related to beta-adaptin and beta-COP
"We have identified a target antigen in autoimmune cerebellar degeneration, beta-NAP, that is closely related to the beta-adaptin and beta-COP coat proteins."
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Beta-NAP is expressed exclusively in neurons from E12 through adulthood
"Beta-NAP is a nonclathrin-associated phosphoprotein expressed exclusively in neurons, from E12 through adulthood."
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Present in neuronal soma and nerve terminal as soluble and membrane-bound pools
"Beta-NAP is present in the neuronal soma and nerve terminal as soluble and membrane-bound pools"
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Associated with a discrete set of nerve-terminal vesicles
"and is associated with a discrete set of nerve-terminal vesicles"
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Proposed to mediate vesicle transport between soma and axon terminus
"We propose a model in which beta-NAP mediates vesicle transport between the soma and the axon terminus"
Association of the AP-3 adaptor complex with clathrin.
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AP-3 associates with clathrin via the beta3 subunit appendage domain
"In vitro binding assays showed that mammalian AP-3 did associate with clathrin by interaction of the appendage domain of its beta3 subunit with the amino-terminal domain of the clathrin heavy chain."
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Beta3 appendage binds the amino-terminal domain of clathrin heavy chain
"by interaction of the appendage domain of its beta3 subunit with the amino-terminal domain of the clathrin heavy chain"
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AP-3 colocalizes with clathrin in cells by immunofluorescence and immunoEM
"AP-3 colocalized with clathrin in cells as observed by immunofluorescence and immunoelectron microscopy."
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AP-3 function in protein sorting may depend on clathrin
"Thus, AP-3 function in protein sorting may depend on clathrin."
Genetic analysis of the neuronal and ubiquitous AP-3 adaptor complexes reveals divergent functions in brain.
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Neurons express AP-3 with either ubiquitous (beta3A) or neuronal-specific (beta3B) isoforms
"Neurons express adaptor (AP)-3 complexes assembled with either ubiquitous (beta3A) or neuronal-specific (beta3B) beta3 isoforms."
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Beta3B-containing AP-3 is preferentially targeted to neuronal processes
"At the cellular level, AP-3 isoforms were localized to distinct neuronal domains. beta3B-containing AP-3 complexes were preferentially targeted to neuronal processes."
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Beta3B deficiency compromises synaptic vesicle targeting of ZnT3 and ClC-3
"Consistently, beta3B deficiency compromised synaptic zinc stores assessed by Timm's staining and the synaptic vesicle targeting of membrane proteins involved in zinc uptake (ZnT3 and ClC-3)."
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Neuronal and ubiquitous AP-3 have distinct and divergent functions
"These observations indicate that the functions of beta3A- and beta3B-containing complexes are distinct and divergent."
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Concerted functions control levels of selected membrane proteins in synaptic vesicles
"Our results suggest that concerted nonredundant functions of neuronal and ubiquitous AP-3 provide a mechanism to control the levels of selected membrane proteins in synaptic vesicles."
Cell type-specific Rab32 and Rab38 cooperate with the ubiquitous lysosome biogenesis machinery to synthesize specialized lysosome-related organelles.
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Rab32 and Rab38 interact with AP-1, AP-3, and BLOC-2 on early/recycling endosome membranes
"endogenous Rab32 and Rab38 were found to interact with BLOC-2, AP-1 and AP-3 in membrane, but not cytosolic fractions"
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AP-3 localizes to specific tubular domains of early/recycling endosomes
"The localization of Rab32 and Rab38 is likely to specific tubular domains of early/recycling endosomes that contain AP-1, AP-3 or BLOC-2."
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AP-3 functions in cargo sorting to lysosome-related organelles
"Packaging of the tyrosinases into transport vesicles at early/recycling endosome-associated tubules is dependent on ubiquitous adaptor protein complex (AP)-1 and AP-3"
Deep research review of AP3B2 gene function
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AP3B2 is the neuron-specific beta subunit of the AP-3 adaptor complex
"AP3B2 encodes the beta-2 subunit of the adaptor-related protein complex 3 (AP-3)"
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AP-3 mediates protein sorting from TGN and endosomes to lysosomes
"AP-3 plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes"
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Mutations cause developmental and epileptic encephalopathy type 48 (DEE48)
"Biallelic loss-of-function mutations in AP3B2 cause developmental and epileptic encephalopathy 48 (DEE48)"
Comprehensive deep research review of AP3B2 gene function (Cyberian)
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AP-3 generates synaptic vesicles responding specifically to high-frequency stimulation through recruitment of phospholipid flippase ATP8A1
"The study demonstrated that in mouse hippocampal neurons and slices, AP-3 generates a subset of synaptic vesicles that respond specifically to high-frequency stimulation. Proteomics analysis identified the phospholipid flippase ATP8A1 and its auxiliary subunit TMEM30A as AP-3-dependent synaptic vesicle cargoes."
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AP-3 has two independent functions in dopamine neurons - targeting VMAT2 to axons and producing high-frequency-responsive synaptic vesicles
"First, AP-3 confers axonal polarity of dopamine release by targeting vesicular monoamine transporter 2 (VMAT2) to axons rather than dendrites. Second, AP-3 acting locally at nerve terminals produces synaptic vesicles that respond specifically to high-frequency stimulation."
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Cryo-EM structures reveal stepwise conformational activation of AP-3 mediated by Arf1 dimerization
"This work revealed that dimerization of AP-3 is mediated by the small GTPase Arf1, using the same interface that mediates Arf polymerization... Three distinct structural states were identified: AP-3 bound to a single Arf1 on the delta subunit, AP-3 bound to two Arf1 copies with LAMP1 cargo, and a dimer of the double-Arf1-cargo-AP-3 complex."
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AP-3-derived vesicles contribute specifically to asynchronous neurotransmitter release
"Vesicles derived via the AP-3-dependent recycling pathway contribute specifically to asynchronous release and influence information transfer."
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Beta3B deficiency has opposite effects on synaptic vesicle protein composition compared to beta3A deficiency
"Loss of the ubiquitous isoform (beta3A) has the opposite effect, significantly increasing synaptic zinc and zinc transporter content."