uap1.S: exact selected product and human ortholog reference

Selected Q6DCZ6 has 507 residues; reference Q16222 has 522 residues.

Biopython PairwiseAligner global BLOSUM62, gap open -10, extension -0.5.

Reference interval Selected interval Identical residues
1–453 1–453 342
471–522 454–505 40

Reference feature mapping (sequence coverage does not establish retained function):

Reference feature Interval Mapped / length Identical
Binding site: 108–108 1 / 1 1
Binding site: 108–108 1 / 1 1
Binding site: 110–110 1 / 1 1
Binding site: 110–110 1 / 1 1
Binding site: 111–111 1 / 1 1
Binding site: 111–111 1 / 1 1
Binding site: 196–196 1 / 1 1
Binding site: 196–196 1 / 1 1
Binding site: 222–222 1 / 1 1
Binding site: 222–222 1 / 1 1
Binding site: 223–223 1 / 1 1
Binding site: 223–223 1 / 1 1
Binding site: 251–251 1 / 1 1
Binding site: 251–251 1 / 1 1
Binding site: 252–252 1 / 1 1
Binding site: 252–252 1 / 1 1
Binding site: 290–290 1 / 1 1
Binding site: 290–290 1 / 1 1
Binding site: 303–303 1 / 1 1
Binding site: 303–303 1 / 1 1
Binding site: 304–304 1 / 1 1
Binding site: 304–304 1 / 1 1
Binding site: 327–327 1 / 1 1
Binding site: 327–327 1 / 1 1
Binding site: 381–381 1 / 1 1
Binding site: 407–407 1 / 1 1
Binding site: 407–407 1 / 1 1
Binding site: 472–472 1 / 1 1
Binding site: 472–472 1 / 1 1

A shared segment does not establish that a truncated product folds, is expressed, localizes, or catalyzes the full-length reaction.

Inputs are the sibling frozen ProtNLM source and human ortholog reference JSON files. Reproduce with UV_NO_SYNC=1 uv run python compare_sequences.py from this directory.