Vmn2r73: exact selected product and same-gene reference

Selected A0A3B2WCZ5 has 496 residues; reference D3Z7M3 has 851 residues.

Biopython PairwiseAligner global BLOSUM62, gap open -10, extension -0.5.

Reference interval Selected interval Identical residues
1–429 1–429 429
506–548 430–472 41
566–568 473–475 3
631–640 476–485 4
698–708 486–496 3

Reference feature mapping (sequence coverage does not establish retained function):

Reference feature Interval Mapped / length Identical
Signal: 1–18 18 / 18 18
Transmembrane: Helical 584–606 0 / 23 0
Transmembrane: Helical 618–639 9 / 22 4
Transmembrane: Helical 651–675 0 / 25 0
Transmembrane: Helical 695–718 11 / 24 3
Transmembrane: Helical 738–762 0 / 25 0
Transmembrane: Helical 774–794 0 / 21 0
Transmembrane: Helical 800–822 0 / 23 0
Domain: G-protein coupled receptors family 3 profile 581–844 21 / 264 7

A shared segment does not establish that a truncated product folds, is expressed, localizes, or catalyzes the full-length reaction.

Inputs are the sibling frozen ProtNLM source and same-gene reference JSON files. Reproduce with UV_NO_SYNC=1 uv run python compare_sequences.py from this directory.