Combined Automated Annotation using Multiple IEA Methods
UniProtKB entry for pqqB (Coenzyme PQQ synthesis protein B)
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"PATHWAY: Cofactor biosynthesis; pyrroloquinoline quinone biosynthesis."
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"SIMILARITY: Belongs to the PqqB family."
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"FUNCTION: May be involved in the transport of PQQ or its precursor to"
QuickGO GOA annotations for pqqB
Discovery of Hydroxylase Activity for PqqB Provides a Missing Link in the Pyrroloquinoline Quinone Biosynthetic Pathway.
UniProtKB entry for Methylorubrum extorquens AM1 PqqB
Falcon deep research report for pqqB (PP_0379, Q88QV5) in Pseudomonas putida KT2440
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"PP_0379 is explicitly annotated as **pqqB** and is genomically adjacent to **pqqC (PP0378)** and **pqqA (PP0380)**"
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"PqqB is part of PQQ biosynthesis and is transcriptionally co-induced with neighboring pqq genes under antibiotic stress."
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"pqqB upregulated 2.2-fold"
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"Insertional disruption of **pqqB (PP_0379)** and **pqqC (PP_0378)** is associated with compromised growth under chloramphenicol"
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"PqqB proteins are homologous to the **metallo-β-lactamase fold** superfamily and have an X-ray structure (review cites **PDB 3JXP**)"
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"a motif typical of **non-heme metal-binding oxygenases**, supporting an oxygenase-like hypothesis"
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"PqqB also appears to contain a **structural Zn²⁺ site** (conserved cysteine motif) that may stabilize the protein rather than directly catalyze the primary chemistry"
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"non-heme metallo-oxygenase-like enzyme proposed to hydroxylate PqqA Tyr early in PQQ biosynthesis."
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"Direct enzyme assay evidence for KT2440 PqqB substrate specificity and product formation is not present in the retrieved sources"
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"the catalytic assignment should be recorded as **inference supported by structure and pathway models**"
OpenScientist gene research for pqqB (Q88QV5)