Gene Ontology annotation through association of InterPro records with GO terms

Electronic Gene Ontology annotations created by transferring manual GO annotations between related proteins based on shared sequence features

GO_REF:0000118

TreeGrafter-generated GO annotations

GO_REF:0000120

Combined Automated Annotation using Multiple IEA Methods

file:PSEPK/recD/recD-uniprot.txt

UniProtKB entry for recD (Q88DZ6)

The record supplies the subunit identity, family assignment, and transferred RecBCD mechanism.

file:PSEPK/recD/recD-goa.tsv

QuickGO GOA annotations for recD

file:projects/P_PUTIDA/deep-research/PSEPK__recbcd-end-resection__ppu03440-deep-research-openscientist.md

OpenScientist PSEPK RecBCD end-resection synthesis

The report resolves the complete recD-recB-recC operon and the Pseudomonas Chi-recognition caveat.

PMID:20195537

All three subunits of RecBCD enzyme are essential for DNA repair and low-temperature growth in the Antarctic Pseudomonas syringae Lz4W.

P. syringae RecD is required for DNA-damage resistance and functions specifically through the three-subunit RecBCD complex.

"The RecD requirement is only a function of the RecBCD complex"

PMID:2559208

Activation of Chi recombinational hotspots by RecBCD-like enzymes from enteric bacteria.

Pseudomonas recBCD-like genes restore recombination but do not activate the E. coli Chi sequence.

"Three clones from Pseudomonas aeruginosa and Ps. putida conferred recombination proficiency and ATP-dependent nuclease activity, but neither Chi hotspot activity nor Chi-dependent DNA cleavage."