Gene Ontology annotation through association of InterPro records with GO terms
Electronic Gene Ontology annotations created by transferring manual GO annotations between related proteins based on shared sequence features
TreeGrafter-generated GO annotations
Combined Automated Annotation using Multiple IEA Methods
The faulty SOS response of Pseudomonas putida KT2440 stems from an inefficient RecA-LexA interplay
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Activated P. putida KT2440 RecA (RecA*PP) fully cleaves the principal SOS repressor LexA1, but the overall SOS response in KT2440 is unusually weak due to inefficient RecA-LexA interplay and promoter/repression architecture. Basal recA and lexA1 expression is high even without DNA damage. RecA-LexA compatibility is asymmetric between P. putida and E. coli.
Generation and repair of postreplication gaps in Escherichia coli
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Authoritative review of RecA-centered recombination, describing RecA nucleation on ssDNA, helical filament formation, homology search, and ATP-coupled strand exchange in recombinational repair.
Physiological responses of Pseudomonas putida to formaldehyde during detoxification
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P. putida KT2440 recA (PP_1629) mutants are hypersensitive to lethal (10 mM) formaldehyde, with killing rates 3-4 orders of magnitude higher than the parental strain, indicating RecA-dependent DNA repair contributes to stress survival.