Gene Ontology annotation based on Enzyme Commission mapping
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Automatic Gene Ontology annotation based on Rhea mapping
A test case for structure-based functional assignment -- the 1.2 A crystal structure of the yjgF gene product from Escherichia coli.
Localization, annotation, and comparison of the Escherichia coli K-12 proteome under two states of growth.
A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis.
Protein abundance profiling of the Escherichia coli cytosol.
Conserved YjgF protein family deaminates reactive enamine/imine intermediates of pyridoxal 5'-phosphate (PLP)-dependent enzyme reactions.
Redox proteomics uncovers peroxynitrite-sensitive proteins that help Escherichia coli to overcome nitrosative stress.
Activation of RidA chaperone function by N-chlorination.
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RidA modified with HOCl acts as a highly effective chaperone holdase
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Untreated RidA has no chaperone activity
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Chaperone activation requires N-chlorination of lysine and arginine residues
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ridA deletion mutants are sensitive to HOCl stress
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Chaperone activation is reversible by DTT, ascorbic acid, thioredoxin and glutathione
Unfolded Protein Binding Annotation Review