Gene Ontology annotation through association of InterPro records with GO terms

file:PSEPK/PP_3198/PP_3198-uniprot.txt

UniProtKB entry Q88I04 for Pseudomonas putida KT2440 PP_3198

The target is a 112-aa Rieske [2Fe-2S]-domain protein.

"InterPro; IPR017941; Rieske_2Fe-2S."

Genetic and functional characterization of a novel meta-pathway for degradation of naringenin in Herbaspirillum seropedicae SmR1.

The Herbaspirillum fde locus performs naringenin degradation, but the abstract does not test Hsero_1006/FdeD.

"naringenin is first mono-oxygenated by the FdeE protein"

file:PSEPK/PP_3198/PP_3198-bioinformatics/RESULTS.md

Reproducible PP_3198 and Hsero_1006 sequence and KEGG comparison

PP_3198 maps to K26179 and shares 45.6% identity over aligned residue pairs with D8J0W8.

"Pairwise identity over aligned residue pairs: 45.6%"