GO_REF:0000033
Annotation inferences using phylogenetic trees
GO_REF:0000052
Gene Ontology annotation based on curation of immunofluorescence data
GO_REF:0000120
Combined Automated Annotation using Multiple IEA Methods
PMID:11818576
Human Elongator facilitates RNA polymerase II transcription through chromatin.
PMID:12032076
Properties of the hybrid form of the 26S proteasome containing both 19S and PA28 complexes.
PMID:16713569
A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration.
PMID:16990800
A novel proteasome interacting protein recruits the deubiquitinating enzyme UCH37 to 26S proteasomes.
PMID:17139257
hRpn13/ADRM1/GP110 is a novel proteasome subunit that binds the deubiquitinating enzyme, UCH37.
PMID:17323924
Mass spectrometric characterization of the affinity-purified human 26S proteasome complex.
PMID:18162577
Relative structural and functional roles of multiple deubiquitylating proteins associated with mammalian 26S proteasome.
PMID:18497817
Proteasome subunit Rpn13 is a novel ubiquitin receptor.
PMID:18922472
Distinct modes of regulation of the Uch37 deubiquitinating enzyme in the proteasome and in the Ino80 chromatin-remodeling complex.
PMID:19489727
Recognition and processing of ubiquitin-protein conjugates by the proteasome.
PMID:19490896
Assembly pathway of the Mammalian proteasome base subcomplex is mediated by multiple specific chaperones.
PMID:19615732
Defining the human deubiquitinating enzyme interaction landscape.
PMID:20059542
Cross-species divergence of the major recognition pathways of ubiquitylated substrates for ubiquitin/26S proteasome-mediated proteolysis.
PMID:20471946
Structure of proteasome ubiquitin receptor hRpn13 and its activation by the scaffolding protein hRpn2.
PMID:21516116
Next-generation sequencing to generate interactome datasets.
PMID:24811749
Autoubiquitination of the 26S proteasome on Rpn13 regulates breakdown of ubiquitin conjugates.
PMID:25416956
A proteome-scale map of the human interactome network.
PMID:27107012
Pooled-matrix protein interaction screens using Barcode Fusion Genetics.
PMID:28514442
Architecture of the human interactome defines protein communities and disease networks.
PMID:29636472
Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
PMID:31064842
Phosphorylation of Tyr-950 in the proteasome scaffolding protein RPN2 modulates its interaction with the ubiquitin receptor RPN13.
PMID:31380390
Regulation of Proteasome Activity by (Post-)transcriptional Mechanisms.
PMID:31515488
Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations.
PMID:33729481
Proteasome in action: substrate degradation by the 26S proteasome.
PMID:33961781
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
PMID:35858375
Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
PMID:37228199
An abundance of free regulatory (19S) proteasome particles regulates neuronal synapses.
PMID:40205054
Multimodal cell maps as a foundation for structural and functional genomics.
Reactome:R-HSA-1168640
Ubiquitinated IkB is degraded
Reactome:R-HSA-1234159
Proteasome proteolyzes ub-HIF-alpha
Reactome:R-HSA-1236970
Proteasomal clevage of exogenous antigen (26S proteasome catalyst)
Reactome:R-HSA-1504193
Ubiquitinated DVL is degraded by the proteasome
Reactome:R-HSA-174058
Degradation of multiubiquitinated Cdh1
Reactome:R-HSA-174105
Degradation of multiubiquitinated cell cycle proteins
Reactome:R-HSA-174202
Degradation of multiubiquitinated Securin
Reactome:R-HSA-174203
SCF-mediated degradation of Emi1
Reactome:R-HSA-174255
Degradation multiubiquitinated Cyclin A
Reactome:R-HSA-180573
Degradation of ubiquitinated CD4
Reactome:R-HSA-180603
Proteosome-mediated degradation of APOBEC3G
Reactome:R-HSA-187574
Degradation of ubiquitinated p27/p21 by the 26S proteasome
Reactome:R-HSA-188191
APC/C:Cdh1-mediated degradation of Skp2
Reactome:R-HSA-209061
Ubiquitinated and phosphorylated IKBA binds to and is degraded by the proteasome complex
Reactome:R-HSA-2130282
Degradation of ubiquitinated beta catenin by the proteasome
Reactome:R-HSA-264458
Proteasome mediated degradation of COP1
Reactome:R-HSA-353125
26S proteosome degrades ODC holoenzyme complex
Reactome:R-HSA-3640874
Ub-RibC-AXIN is degraded by the proteasome
Reactome:R-HSA-450466
AUF1:mRNA complex is degraded
Reactome:R-HSA-4608855
PRICKLE1 is degraded by the proteasome
Reactome:R-HSA-4641256
Ubiquitinated AXIN is degraded by the proteasome
Reactome:R-HSA-4641260
Ubiquitinated DVL1 is degraded by the proteasome
Reactome:R-HSA-5362448
Hh C-terminal fragments are degraded by the proteasome
Reactome:R-HSA-5387392
processing defective Hh variants are degraded by the proteasome
Reactome:R-HSA-5607724
26S proteasome processes K48PolyUb-K21,22-p-S32,36-IkBA:NF-kB complex to form NF-kB complex
Reactome:R-HSA-5607731
26S proteasome processes p-7S-p100:RELB to form p52:RELB
Reactome:R-HSA-5610754
GLI3 is partially degraded by the proteasome to yield the GLI3 repressor
Reactome:R-HSA-5610758
GLI1 is degraded by the proteasome after ubiquitination by beta-TrCP
Reactome:R-HSA-5610760
GLI1 is degraded by the proteasome after ubiquitination by ITCH
Reactome:R-HSA-5635854
GLI2,3 are degraded by the proteasome
Reactome:R-HSA-5635868
ub-GLI is degraded by the proteasome
Reactome:R-HSA-5658430
NF1 is degraded by the proteasome
Reactome:R-HSA-5665854
ADRM1:26S proteaseome binds UCHL5
Reactome:R-HSA-5665871
ADRM1 binds 26S proteasome
Reactome:R-HSA-5668481
Protesomal degradation of K48polyUb-TRAF3
Reactome:R-HSA-5668520
26Sproteasome degrades K48polyUb-NIK
Reactome:R-HSA-5687112
MAPK6 is degraded by the 26S proteasome
Reactome:R-HSA-5689539
ADRM1:26S proteaseome binds USP14
Reactome:R-HSA-68825
Ubiquitinated geminin is degraded by the proteasome
Reactome:R-HSA-68948
Ubiquitinated Orc1 is degraded by the proteasome
Reactome:R-HSA-69016
Ubiquitinated Cdc6 is degraded by the proteasome
Reactome:R-HSA-69600
Proteolytic degradation of ubiquitinated-Cdc25A
Reactome:R-HSA-75825
Proteasome mediated degradation of Cyclin D1
Reactome:R-HSA-8850992
Proteasome degrades polyubiquitinated PTEN
Reactome:R-HSA-8852354
GTSE1 facilitates proteasome-mediated degradation of TP53
Reactome:R-HSA-8854044
Proteasome degrades AURKA ubiquitinated by SCF-FBXL7
Reactome:R-HSA-8854071
Proteasome-mediated degradation of PolyUb-FBXL7
Reactome:R-HSA-8866553
misfolded CFTR is degraded by the 26S proteasome
Reactome:R-HSA-8866858
CFTR F508del is degraded by the 26S proteasome
Reactome:R-HSA-8932355
26S proteasome degrades Ub-NFE2L2
Reactome:R-HSA-8939801
26S proteasome degrades PolyUb-RUNX2
Reactome:R-HSA-8952408
Polyubiquitinated RUNX3 is degraded by the proteasome
Reactome:R-HSA-8956140
NEDD8 and UBD bind NUB1 and the 26S proteasome
Reactome:R-HSA-8956184
26S- and NUB1-mediated degradation of NEDD8, UBD and their conjugates
Reactome:R-HSA-8957265
26S proteasome degrades TP73 polyubiquitinated by ITCH
Reactome:R-HSA-9755303
26S proteasome degrades HIFalpha
Reactome:R-HSA-9755306
ub UBXN7 is degraded by the 26S proteasome
Reactome:R-HSA-9762096
Ub,pS335,S338,T NFE2L2 is degraded
Reactome:R-HSA-9766223
Proteasome-dependent degradation of ubiquitinated CDH1
Reactome:R-HSA-983150
Proteasomal cleavage of substrate
Reactome:R-HSA-9907980
Formation of the 19S regulatory particle base precursor
Reactome:R-HSA-9908026
Formation of the 19S regulatory particle precursor
Reactome:R-HSA-9908178
Formation of the 26S proteasome
Reactome:R-HSA-9929352
Ubiquitinated CD274 is degraded by the 26S proteasome
Reactome:R-HSA-9929486
SPOP-mediated degradation of CD274 by 26S Proteosome
Reactome:R-HSA-9931314
Proteasomal degradation of polyUb-p-S195-CD274
Reactome:R-HSA-9934893
Proteolysis of K48polyUb-K,p-S-PER1,2,3
Reactome:R-HSA-9954728
The proteasome degrades the K48-polyubiquitinated alanine-tailed nascent peptide
Reactome:R-NUL-212917
Proteasome mediated degradation of PAK-2p34
Reactome:R-NUL-5610751
Gli2is degraded by the proteasome
Reactome:R-NUL-9011324
Proteasome degrades SAX-3 ubiquitinated by EBAX-1
Reactome:R-NUL-9604648
Proteasome degrades ubiquitinated mouse NICD4
file:human/ADRM1/ADRM1-notes.md
ADRM1 PN review notes
file:human/ADRM1/ADRM1-deep-research-manual.md
ADRM1 manual deep research
file:projects/PROTEOSTASIS/reports/pn_projection/pn_projected_annotations.tsv
Proteostasis PN projected annotations