LPXC2 (At1g24880, P0DKB7) notes
Deep research (falcon) fails in this environment (authentication), so no
-deep-research-*.md file exists. The shared literature summary for the five-gene
AtLpxC tandem cluster is in genes/ARATH/LPXC1/LPXC1-notes.md, and the paralog/active-site
analysis is in genes/ARATH/LPXC1/LPXC1-bioinformatics/RESULTS.md.
Locus-specific points
- Li et al. 2011 Table 1 (PMC3136250) lists At1g24880 as AtLpxC2.
- The canonical UniProt product (P0DKB7, 326 aa) is 100% identical to LPXC1/AtLpxC1.1 and to
the other three copies, and keeps all E. coli LpxC Zn(2+) ligands and catalytic residues
(file:ARATH/LPXC1/LPXC1-bioinformatics/RESULTS.md).
- No experiment has targeted this locus alone. The RNAi in Li et al. 2011 hit all five
genes PMID:21709257,
and the authors could not say which copy is active
PMID:21709257.
- The mitochondrial IDA in GOA comes from the AtLpxC1.1 (LPXC1) GFP fusion
PMID:21709257;
accepted here because the protein is identical.
- GOA has no AtSubP chloroplast (ISM) row for this locus, unlike the other four copies. It has the UniProt IDA/IMP rows but no TAIR rows.