Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Gene Ontology annotation based on curation of immunofluorescence data
Electronic Gene Ontology annotations created by ARBA machine learning models
Mammalian Sec61 is associated with Sec62 and Sec63.
An interaction between human Sec63 and nucleoredoxin may provide the missing link between the SEC63 gene and polycystic liver disease.
Different effects of Sec61α, Sec62 and Sec63 depletion on transport of polypeptides into the endoplasmic reticulum of mammalian cells.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.
Chaperone-Mediated Sec61 Channel Gating during ER Import of Small Precursor Proteins Overcomes Sec61 Inhibitor-Reinforced Energy Barrier.
Signal sequences encode information for protein folding in the endoplasmic reticulum.
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Marginally hydrophobic signal sequences and transmembrane domains cause transient retention at the Sec61 translocon and require luminal BiP for efficient translocation. Sec63 is co-translationally recruited to the translocation site and mediates BiP binding to incoming polypeptides, which releases translocationally paused nascent chains and ensures proper folding in the ER; increasing signal-sequence hydrophobicity bypasses Sec63/BiP dependence.
Activation of ACLY by SEC63 deploys metabolic reprogramming to facilitate hepatocellular carcinoma metastasis upon endoplasmic reticulum stress.
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In hepatocellular carcinoma, ER stress activates SEC63 via IRE1alpha-mediated phosphorylation at T537; SEC63 stabilizes ACLY (ATP-citrate lyase) to increase acetyl-CoA and lipid biosynthesis, and also enters the nucleus to coordinate with ACLY in epigenetically upregulating Snail1, promoting metastasis. SEC63 is upregulated in HCC, correlates with ACLY, and predicts unfavorable prognosis.
Genetic Analysis of Severe Polycystic Liver Disease in Japan.
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In a Japanese cohort of 49 patients with severe polycystic liver disease (height-adjusted total liver volume >1800 mL/m), 44/49 (90%) carried pathogenic or suspected pathogenic variants in polycystic disease genes; SEC63 accounted for 1/44 (2%) of genetically solved cases, supporting its inclusion in diagnostic ADPLD gene panels.
Identification of signal peptide features for substrate specificity in human Sec62/Sec63-dependent ER protein import.
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In intact human cells, 22 novel Sec62/Sec63-dependent substrates were identified in addition to ERj3; SEC62/SEC63 clients share signal peptides with longer but less hydrophobic H-regions and lower C-region polarity, and a slowly gating signal peptide combined with a downstream positively charged cluster is decisive for the Sec62/Sec63 requirement. The Sec62/Sec63 complex may support Sec61 opening by direct interaction with the cytosolic N-terminus of Sec61alpha or via recruitment of BiP to ER-lumenal loop 7 of Sec61alpha; these insights inform the etiology of SEC63-linked polycystic liver disease.
Rules of Engagement for Components of Membrane Protein Biogenesis at the Human Endoplasmic Reticulum.
UniProt entry Q9UGP8 (SEC63_HUMAN, DNAJC23), Translocation protein SEC63 homolog
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SEC63 mediates cotranslational and post-translational transport of precursors across the ER, cooperates with SEC62 and HSPA5/BiP to import small presecretory proteins into the Sec61 channel; multi-pass ER membrane protein with a luminal DnaJ J-domain (104-165); required for PKD1 biogenesis; LoF variants cause PCLD2.