Gene Ontology annotation through association of InterPro records with GO terms
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Gene Ontology annotation based on curation of immunofluorescence data
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Proteomics of endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membranes from brefeldin A-treated HepG2 cells identifies ERGIC-32, a new cycling protein that interacts with human Erv46.
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ERGIC membranes purified from brefeldin A-treated HepG2 cells (enriched ~110-fold over ERGIC-53) contain established and putative cargo receptors of the early secretory pathway, including VIP36, identified by mass spectrometry.
Large-scale proteomics and phosphoproteomics of urinary exosomes.
Role of the lectin VIP36 in post-ER quality control of human alpha1-antitrypsin.
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VIP36 is an L-type lectin that localizes to the Golgi and cycles early in the secretory pathway, binding high-mannose glycans in vitro with a pH optimum of 6.5.
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VIP36 binds exclusively the high-mannose form of alpha1-antitrypsin; the complex localizes to Golgi and ER and recycles from the Golgi back to the ER, and silencing VIP36 accelerates alpha1-AT transport, consistent with a post-ER quality-control rather than anterograde role.
VIP36 protein is a target of ectodomain shedding and regulates phagocytosis in macrophage Raw 264.7 cells.
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VIP36 (a lectin-domain transmembrane protein postulated as a cargo receptor for Golgi-to-ER transport) is subject to ectodomain shedding mainly on the cell surface, and the amount of VIP36 regulates phagocytosis in macrophages in a shedding-dependent manner.
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VIP36 localizes mainly to the ER and Golgi; only the Endo-H-resistant cell-surface glycoform is shed, and lectin activity is dispensable for the enhancement of phagocytosis.
In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine.
Parallel quantification of lectin-glycan interaction using ultrafiltration.
Exploring the landscape of ectodomain shedding by quantitative protein terminomics.
UniProt entry Q12907 (LMAN2_HUMAN), Vesicular integral-membrane protein VIP36
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Intracellular L-type lectin of the early secretory pathway that interacts with high-mannose-type glycans and is involved in the transport and sorting of high-mannose glycoproteins; single-pass type I membrane protein of the ERGIC, Golgi and ER membranes; binds 2 calcium ions per subunit as a structural cofactor.