Gene Ontology annotation through association of InterPro records with GO terms
Gene Ontology annotation based on Enzyme Commission mapping
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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SwissProt keyword-derived (SPKW) annotation present in the Sept 2025 goa_uniprot_gcrp snapshot but removed from the current GOA release after GOA retired the keyword2GO pipeline for cellular organisms.
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For XA21, the keyword "Plant defense" mapped to the broad term "defense response" (GO:0006952), the ONLY biological-process annotation the gene carried; removal left XA21 with no process term despite immunity being its central role.
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Automatic Gene Ontology annotation based on Rhea mapping
Cleavage and nuclear localization of the rice XA21 immune receptor.
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XA21 confers broad-spectrum immunity to the Gram-negative bacterium Xanthomonas oryzae pv. oryzae (Xoo) upon recognition of the conserved sulfated peptide AxYS22 derived from the Xoo Ax21 protein.
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XA21-GFP localizes to the plasma membrane and the cortical/perinuclear ER in the absence of ligand; ligand recognition triggers accumulation and nuclear translocation of the cleaved intracellular kinase domain.
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The processed XA21 intracellular kinase domain carries a functional NLS (residues 689-694) and interacts with the OsWRKY62 transcriptional regulator exclusively in the nucleus; nuclear translocation is required for XA21-mediated immunity.
An XA21-associated kinase (OsSERK2) regulates immunity mediated by the XA21 and XA3 immune receptors.
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The XA21 immune receptor kinase confers broad-spectrum resistance to Xoo, the causal agent of bacterial leaf blight; it is a non-RD LRR receptor kinase of LRR-RK subfamily XII.
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OsSERK2 forms a constitutive heterodimeric complex with XA21 in planta and interacts with the XA21 intracellular domain in a kinase-activity-dependent manner; OsSERK2 and XA21 undergo bidirectional transphosphorylation in vitro.
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Silencing OsSerk2 in the Xa21 background renders plants susceptible to Xoo, demonstrating OsSERK2 is required for XA21-mediated immunity.
Deep-research report (falcon / Edison Scientific Literature) - functional annotation of rice XA21 (Q2R2D5).
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XA21 is a leucine-rich repeat receptor-like kinase (LRR-RLK) and cell-surface pattern-recognition receptor that initiates pattern-triggered immunity upon perception of a conserved microbial molecule; it is a non-RD kinase associated with innate immune signaling.
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XA21 architecture comprises an extracellular LRR ectodomain (~23 LRRs), a single transmembrane helix, a juxtamembrane region, and a cytosolic Ser/Thr kinase domain; it is N-glycosylated and localizes predominantly to the ER and also to the plasma membrane.
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The accepted activating ligand is the Xoo tyrosine-sulfated peptide RaxX (key Tyr must be sulfated); a synthetic sulfated 21-aa RaxX21-sY peptide is sufficient to trigger XA21-dependent immune responses. Earlier literature used Ax21/AxYS22 nomenclature.
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XA21 signaling is regulated by OsSERK2 and XA21-binding proteins (XB24 ATPase, XB15 PP2C phosphatase, XB3 E3 ligase), and XA21 activates defense outputs (defense gene induction, MAPK-associated signaling, ROS and callose responses) and enhanced resistance to Xoo.