slc7a10b notes
Setup and provenance
- Fetched with
just fetch-gene on E7FE11 (TrEMBL, 517 aa); 11 GOA rows (5 IBA, 5 IEA, 1 IMP from PMID:33408126).
ZFIN ZDB-GENE-121105-2, Ensembl ENSDARG00000051730, chromosome 25.
- Deep research unavailable: Edison returned 402 Payment Required and the OpenAI key is invalid. Literature
searched by hand via Europe PMC (see ../slc7a10a/slc7a10a-notes.md for queries).
- DANRE_DUPLICATION batch 4, random draw 18 (seed 20260928); paralog slc7a10a. Pair analysis in
../slc7a10a/slc7a10a-bioinformatics/.
Zebrafish literature
- Obesity model: slc7a10b loss of function accelerates diet-induced weight gain
PMID:33408126.
The primary paper is cached as abstract only. The same group's review gives details:
PMID:36172277;
PMID:36172277;
PMID:36172277.
The copy was chosen for sequence identity, not expression; slc7a10a was not studied and paralog compensation was
not measured.
- Meninges scRNA-seq: SLC7A10B among transporters enriched in arachnoid cells
PMID:35805100.
- No ZFIN curated expression and no EST profile PMID:34338990.
Mammalian background
See ../slc7a10a/slc7a10a-notes.md.
My analysis
See ../slc7a10a/slc7a10a-bioinformatics/RESULTS.md: protein conserved at all tested Asc-1 residues; slc7a10b is
the slower-evolving copy; expression low and narrow (brain, eye, bone, testis, early embryo), closer to the gar
pattern than slc7a10a.
GOA review decisions
- The 10 IBA/IEA rows accepted, as for slc7a10a.
- Energy homeostasis (IMP, acts upstream of or within) kept as non-core: real, copy-specific phenotype, but an
organism-level consequence of adipocyte amino acid transport.