Gene Ontology annotation through association of InterPro records with GO terms
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Electronic Gene Ontology annotations created by ARBA machine learning models
Combined Automated Annotation using Multiple IEA Methods
Deletion of the mitochondrial superoxide dismutase sod-2 extends lifespan in Caenorhabditis elegans.
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Seminal demonstration that deleting the primary mitochondrial MnSOD sod-2 extends C. elegans lifespan despite increased protein oxidative damage and heightened sensitivity to oxidative stress, directly challenging the oxidative-damage theory of aging. sod-2 mutants phenocopy long-lived mitochondrial mutants (slow development, small brood, reduced respiration).
Hydrogen peroxide produced by superoxide dismutase SOD-2 activates sperm in Caenorhabditis elegans.
Stimulation of RAS-dependent ROS signaling extends longevity by modulating a developmental program of global gene expression.
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Proposes the RAS-dependent ROS signaling (RDRS) mechanism for sod-2 longevity: loss of SOD-2 raises mitochondrial superoxide, which is converted by cytosolic SOD-1 to hydrogen peroxide that oxidizes a redox-sensitive cysteine of LET-60/RAS, driving a global developmental gene-expression program; the lifespan extension requires SOD-1.
The matrix peptide exporter HAF-1 signals a mitochondrial UPR by activating the transcription factor ZC376.7 in C. elegans.
Novel interactions between mitochondrial superoxide dismutases and the electron transport chain.
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SOD-2 is the primary mitochondrial superoxide dismutase and co-localizes by blue-native gel with the respiratory supercomplex I:III:IV; loss of SOD-2 specifically lowers complex I and II activity and destabilizes supercomplex formation. sod-2 single mutants have a normal lifespan, but loss of sod-2 can extend the lifespan of some electron-transport-chain mutants.
Cloning, expression, and characterization of two manganese superoxide dismutases from Caenorhabditis elegans.
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Cloned sod-2 and sod-3, showed both encode mitochondrial (transit-peptide bearing) manganese-type superoxide dismutases, and directly measured their enzymatic activity after heterologous expression in SOD-deficient E. coli (Mn-type: insensitive to hydrogen peroxide and cyanide; dimeric; protective against paraquat/methyl-viologen oxidative stress).