CAPSL: human–horse sequence comparison

Global alignment of cached UniProt sequences gives 202/208 identical paired residues (97.1%). Paired coverage is 100.0% of human Q8WWF8 (208 aa) and 92.4% of horse A0A3Q2I3U9 (225 aa).

Reproduce from the repository root with uv run python genes/HORSE/CAPSL/CAPSL-bioinformatics/align.py (Biopython). The full alignment is in alignment.txt; sequence hashes and scoring parameters are in results.json.

This measures conservation between the identified records. It is not a reciprocal orthology analysis and does not itself validate a functional annotation. Interpret it alongside locus identifiers, domain architecture and primary literature. The sequences are current cached UniProt records, not independently recovered prediction-time inputs.

Human feature correspondence

These mappings report sequence conservation only; they do not validate targeting, activity or annotation transfer.

Human feature Human positions Paired horse positions Identical / paired
BINDING 52–52 69 1/1
BINDING 54–54 71 0/1
BINDING 56–56 73 1/1
BINDING 58–58 75 1/1
BINDING 63–63 80 1/1
BINDING 88–88 105 1/1
BINDING 90–90 107 1/1
BINDING 92–92 109 1/1
BINDING 94–94 111 1/1
BINDING 99–99 116 1/1