Gene Ontology annotation through association of InterPro records with GO terms
Electronic Gene Ontology annotations created by transferring manual GO annotations between related proteins based on shared sequence features
Automatic assignment of GO terms using logical inference, based on on inter-ontology links
Combined Automated Annotation using Multiple IEA Methods
Deep research report on rpoD (Q88QU7, PP_0387) in Pseudomonas putida KT2440
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RpoD/sigma-70 (PP_0387) is the primary housekeeping sigma factor in KT2440, directing RNA polymerase to sigma-70-dependent promoters during exponential growth; multiple native loci are transcribed from sigma-70-dependent promoters.
"In KT2440 transcriptomics rpoD is annotated as RNA polymerase sigma 70 factor (PP_0387) and described as the primary sigma factor during exponential growth; the K1-T6SS cluster is driven by four sigma-70-dependent promoters."
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.