file:human/HSPA8/HSPA8-deep-research-falcon.md
Falcon deep research report for HSPA8
GO_REF:0000002
Gene Ontology annotation through association of InterPro records with GO terms
GO_REF:0000024
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
GO_REF:0000033
Annotation inferences using phylogenetic trees
GO_REF:0000043
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
GO_REF:0000044
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
GO_REF:0000108
Automatic assignment of GO terms using logical inference, based on on inter-ontology links
GO_REF:0000117
Electronic Gene Ontology annotations created by ARBA machine learning models
GO_REF:0000120
Combined Automated Annotation using Multiple IEA Methods
PMID:10722728
The MSG1 non-DNA-binding transactivator binds to the p300/CBP coactivators, enhancing their functional link to the Smad transcription factors.
PMID:10954706
Identification of Mrj, a DnaJ/Hsp40 family protein, as a keratin 8/18 filament regulatory protein.
PMID:11093761
Molecular and functional characterization of HSC54, a novel variant of human heat-shock cognate protein 70.
PMID:11559757
A molecular chaperone complex at the lysosomal membrane is required for protein translocation.
PMID:12150907
CHIP is associated with Parkin, a gene responsible for familial Parkinson's disease, and enhances its ubiquitin ligase activity.
PMID:14532270
A product of the human gene adjacent to parkin is a component of Lewy bodies and suppresses Pael receptor-induced cell death.
PMID:14557246
AIP is a mitochondrial import mediator that binds to both import receptor Tom20 and preproteins.
PMID:14743216
A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway.
PMID:15047060
Analysis of proteins copurifying with the CD4/lck complex using one-dimensional polyacrylamide gel electrophoresis and mass spectrometry: comparison with affinity-tag based protein detection and evaluation of different solubilization methods.
PMID:15048123
Abi1 is essential for the formation and activation of a WAVE2 signalling complex.
PMID:15657067
Phosphotyrosine signaling networks in epidermal growth factor receptor overexpressing squamous carcinoma cells.
PMID:15708368
Small glutamine-rich tetratricopeptide repeat-containing protein is composed of three structural units with distinct functions.
PMID:15936278
HSJ1 is a neuronal shuttling factor for the sorting of chaperone clients to the proteasome.
PMID:16049941
A pilot proteomic study of amyloid precursor interactors in Alzheimer's disease.
PMID:16169070
A human protein-protein interaction network: a resource for annotating the proteome.
PMID:16189514
Towards a proteome-scale map of the human protein-protein interaction network.
PMID:16207813
BAG-2 acts as an inhibitor of the chaperone-associated ubiquitin ligase CHIP.
PMID:16275660
Identification of VCP/p97, carboxyl terminus of Hsp70-interacting protein (CHIP), and amphiphysin II interaction partners using membrane-based human proteome arrays.
PMID:16293251
CHIP interacts with heat shock factor 1 during heat stress.
PMID:16502470
Human colostrum: identification of minor proteins in the aqueous phase by proteomics.
PMID:16531398
Tid1 isoforms are mitochondrial DnaJ-like chaperones with unique carboxyl termini that determine cytosolic fate.
PMID:17022977
Identification of Hsc70 as an influenza virus matrix protein (M1) binding factor involved in the virus life cycle.
PMID:17182002
HDJC9, a novel human type C DnaJ/HSP40 member interacts with and cochaperones HSP70 through the J domain.
PMID:17289661
Molecular composition of IMP1 ribonucleoprotein granules.
PMID:17332742
Composition and three-dimensional EM structure of double affinity-purified, human prespliceosomal A complexes.
PMID:17400507
Identification of potential protein interactors of Lrrk2.
PMID:17620599
Functional specialization of beta-arrestin interactions revealed by proteomic analysis.
PMID:17785435
EWI-2/CD316 is an inducible receptor of HSPA8 on human dendritic cells.
PMID:18320024
The human TPR protein TTC4 is a putative Hsp90 co-chaperone which interacts with CDC6 and shows alterations in transformed cells.
PMID:18457437
Identification of intracellular proteins associated with the EBV-encoded nuclear antigen 5 using an efficient TAP procedure and FT-ICR mass spectrometry.
PMID:19028452
Proteomic profiling of human plasma exosomes identifies PPARgamma as an exosome-associated protein.
PMID:19056867
Large-scale proteomics and phosphoproteomics of urinary exosomes.
PMID:19199708
Proteomic analysis of human parotid gland exosomes by multidimensional protein identification technology (MudPIT).
PMID:19338310
Streamline proteomic approach for characterizing protein-protein interaction network in a RAD52 protein complex.
PMID:19800331
Short peptides derived from the BAG-1 C-terminus inhibit the interaction between BAG-1 and HSC70 and decrease breast cancer cell growth.
PMID:19946888
Defining the membrane proteome of NK cells.
PMID:20176123
Chaperone-mediated autophagy: molecular mechanisms and physiological relevance.
PMID:20176811
Molecular architecture of the human Prp19/CDC5L complex.
PMID:20195357
A comprehensive resource of interacting protein regions for refining human transcription factor networks.
PMID:20391533
Proteomic analysis reveals novel binding partners of MIP-T3 in human cells.
PMID:20458337
MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis.
PMID:20618441
CHIP participates in protein triage decisions by preferentially ubiquitinating Hsp70-bound substrates.
PMID:21148293
The endoplasmic reticulum-associated Hsp40 DNAJB12 and Hsc70 cooperate to facilitate RMA1 E3-dependent degradation of nascent CFTRDeltaF508.
PMID:21150129
A novel ER J-protein DNAJB12 accelerates ER-associated degradation of membrane proteins including CFTR.
PMID:21231916
The diverse members of the mammalian HSP70 machine show distinct chaperone-like activities.
PMID:21235781
Human saliva, plasma and breast milk exosomes contain RNA: uptake by macrophages.
PMID:21362503
Protein profile of exosomes from trabecular meshwork cells.
PMID:21423176
Analysis of the myosin-II-responsive focal adhesion proteome reveals a role for β-Pix in negative regulation of focal adhesion maturation.
PMID:22085931
Optimal functional levels of activation-induced deaminase specifically require the Hsp40 DnaJa1.
PMID:22365833
Dynamic protein-protein interaction wiring of the human spliceosome.
PMID:22516433
Proteomic analysis of microvesicles from plasma of healthy donors reveals high individual variability.
PMID:22645275
Identification of novel ATP13A2 interactors and their role in α-synuclein misfolding and toxicity.
PMID:22658674
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
PMID:22681889
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
PMID:22990239
Metazoan Hsp70 machines use Hsp110 to power protein disaggregation.
PMID:23414517
A human skeletal muscle interactome centered on proteins involved in muscular dystrophies: LGMD interactome.
PMID:23431407
Distinct roles of molecular chaperones HSP90α and HSP90β in the biogenesis of KCNQ4 channels.
PMID:23455607
Interplay of LRRK2 with chaperone-mediated autophagy.
PMID:23523103
Lysine-5 acetylation negatively regulates lactate dehydrogenase A and is decreased in pancreatic cancer.
PMID:23533145
In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine.
PMID:23742842
Splicing and beyond: the many faces of the Prp19 complex.
PMID:23801752
Histone deacetylase 10 promotes autophagy-mediated cell survival.
PMID:23921388
Identification and characterization of a novel human methyltransferase modulating Hsp70 protein function through lysine methylation.
PMID:24122553
The co-chaperone DNAJC12 binds to Hsc70 and is upregulated by endoplasmic reticulum stress.
PMID:24136289
Identification and comparative analysis of hepatitis C virus-host cell protein interactions.
PMID:24189400
Perturbation of the mutated EGFR interactome identifies vulnerabilities and resistance mechanisms.
PMID:24318877
Binding of human nucleotide exchange factors to heat shock protein 70 (Hsp70) generates functionally distinct complexes in vitro.
PMID:24510904
Unbiased screen for interactors of leucine-rich repeat kinase 2 supports a common pathway for sporadic and familial Parkinson disease.
PMID:24658140
The mammalian-membrane two-hybrid assay (MaMTH) for probing membrane-protein interactions in human cells.
PMID:24787902
Functional and molecular features of the calmodulin-interacting protein IQCG required for haematopoiesis in zebrafish.
PMID:24947832
Differential protein-protein interactions of LRRK1 and LRRK2 indicate roles in distinct cellular signaling pathways.
PMID:25281747
RING finger protein RNF207, a novel regulator of cardiac excitation.
PMID:25416956
A proteome-scale map of the human interactome network.
PMID:25468996
E-cadherin interactome complexity and robustness resolved by quantitative proteomics.
PMID:25502805
A massively parallel pipeline to clone DNA variants and examine molecular phenotypes of human disease mutations.
PMID:25609649
Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.
PMID:25719862
Modulation of deregulated chaperone-mediated autophagy by a phosphopeptide.
PMID:25760597
Structural and functional analysis of Hikeshi, a new nuclear transport receptor of Hsp70s.
PMID:25910212
Widespread macromolecular interaction perturbations in human genetic disorders.
PMID:25959826
Quantitative interaction proteomics of neurodegenerative disease proteins.
PMID:26212789
Chaperone-mediated autophagy prevents apoptosis by degrading BBC3/PUMA.
PMID:26775844
Salivary protein histatin 3 regulates cell proliferation by enhancing p27(Kip1) and heat shock cognate protein 70 ubiquitination.
PMID:26871637
Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.
PMID:27103069
Loss of C9ORF72 impairs autophagy and synergizes with polyQ Ataxin-2 to induce motor neuron dysfunction and cell death.
PMID:27107014
An inter-species protein-protein interaction network across vast evolutionary distance.
PMID:27708256
ARD1-mediated Hsp70 acetylation balances stress-induced protein refolding and degradation.
PMID:27916661
Tetrameric Assembly of K(+) Channels Requires ER-Located Chaperone Proteins.
PMID:2799391
A role for a 70-kilodalton heat shock protein in lysosomal degradation of intracellular proteins.
PMID:28514442
Architecture of the human interactome defines protein communities and disease networks.
PMID:29519959
P62/SQSTM1 is a novel leucine-rich repeat kinase 2 (LRRK2) substrate that enhances neuronal toxicity.
PMID:29568061
An AP-MS- and BioID-compatible MAC-tag enables comprehensive mapping of protein interactions and subcellular localizations.
PMID:29601588
ZMYND10 stabilizes intermediate chain proteins in the cytoplasmic pre-assembly of dynein arms.
PMID:29764935
The disorderly conduct of Hsc70 and its interaction with the Alzheimer's-related Tau protein.
PMID:30021884
Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei.
PMID:30827827
A Legionella pneumophila Kinase Phosphorylates the Hsp70 Chaperone Family to Inhibit Eukaryotic Protein Synthesis.
PMID:31273097
The heme-regulated inhibitor is a cytosolic sensor of protein misfolding that controls innate immune signaling.
PMID:31980649
Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRAS(G13D).
PMID:32296183
A reference map of the human binary protein interactome.
PMID:32671205
A micropeptide encoded by lncRNA MIR155HG suppresses autoimmune inflammation via modulating antigen presentation.
PMID:32814053
Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
PMID:33857403
DNAJC9 integrates heat shock molecular chaperones into the histone chaperone network.
PMID:33961781
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
PMID:35044787
Loss-of-function mutations in the co-chaperone protein BAG5 cause dilated cardiomyopathy requiring heart transplantation.
PMID:35271311
OpenCell: Endogenous tagging for the cartography of human cellular organization.
PMID:36586411
Palmitoylation prevents sustained inflammation by limiting NLRP3 inflammasome activation through chaperone-mediated autophagy.
PMID:39225180
ABHD8 antagonizes inflammation by facilitating chaperone-mediated autophagy-mediated degradation of NLRP3.
PMID:40205054
Multimodal cell maps as a foundation for structural and functional genomics.
PMID:40281343
PSAT1 impairs ferroptosis and reduces immunotherapy efficacy via GPX4 hydroxylation.
PMID:8524399
Role of auxilin in uncoating clathrin-coated vesicles.
PMID:8530083
Localization of the gene encoding the human heat shock cognate protein, HSP73, to chromosome 11.
PMID:9305631
BAG-1 modulates the chaperone activity of Hsp70/Hsc70.
PMID:9499401
Molecular chaperones as HSF1-specific transcriptional repressors.
Reactome:R-HSA-199991
Membrane Trafficking
Reactome:R-HSA-3371422
ATP hydrolysis by HSP70
Reactome:R-HSA-3371467
SIRT1 deacetylates HSF1
Reactome:R-HSA-3371497
HSP90 chaperone cycle for steroid hormone receptors (SHR) in the presence of ligand
Reactome:R-HSA-3371503
STIP1(HOP) binds HSP90 and HSP70:HSP40:nascent protein
Reactome:R-HSA-3371518
SIRT1 binds to HSF1
Reactome:R-HSA-3371554
HSF1 acetylation at Lys80
Reactome:R-HSA-3371590
HSP70 binds to HSP40:nascent protein
Reactome:R-HSA-421836
trans-Golgi Network Derived Vesicle Uncoating
Reactome:R-HSA-432688
trans-Golgi Network Derived Lysosomal Vesicle Uncoating
Reactome:R-HSA-450551
AUF1 binds translation and heat shock proteins
Reactome:R-HSA-450580
AUF1 (hnRNP D0) is ubiquitinylated
Reactome:R-HSA-5082356
HSF1-mediated gene expression
Reactome:R-HSA-5082369
Acetylated HSF1 dissociates from DNA
Reactome:R-HSA-5082384
HSP70:DNAJB1 binds HSF1
Reactome:R-HSA-5618085
FKBP4 binds HSP90:ATP:STIP1:HSP70:nascent protein
Reactome:R-HSA-5618098
p23 (PTGES3) binds HSP90:ATP:FKBP5:nascent protein
Reactome:R-HSA-5618105
FKBP5 binds HSP90:ATP:STIP1:HSP70:nascent protein
Reactome:R-HSA-5618107
ATP binding to HSP90 triggers conformation change
Reactome:R-HSA-5618110
p23 (PTGES3) binds HSP90:ATP:FKBP4:nascent protein
Reactome:R-HSA-6797269
Expression of HSPA8, ALOX15
Reactome:R-HSA-6798748
Exocytosis of secretory granule lumen proteins
Reactome:R-HSA-6800434
Exocytosis of ficolin-rich granule lumen proteins
Reactome:R-HSA-8868658
HSPA8-mediated ATP hydrolysis promotes vesicle uncoating
Reactome:R-HSA-8868660
Auxilin recruits HSPA8:ATP to the clathrin-coated vesicle
Reactome:R-HSA-888589
Release of GABA at the synapse
Reactome:R-HSA-8932221
METTL21A transfers 3xCH3 from 3xAdoMet to HSPA8
Reactome:R-HSA-917744
GABA loaded synaptic vesicle Docking and Priming
Reactome:R-HSA-9770131
Formation of the Spliceosomal B* complex
Reactome:R-HSA-9770141
Formation of the Spliceosomal C* complex
Reactome:R-HSA-9770145
Formation of the Spliceosomal Bact complex
Reactome:R-HSA-9770236
Formation of the Spliceosomal P complex and exon ligation
Reactome:R-HSA-9770847
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new)
Reactome:R-HSA-9772351
Disassembly of the Intron Lariat Spliceosome (new)
Reactome:R-HSA-9794542
Formation of the Spliceosomal C complex containing intron lariat
Reactome:R-HSA-9835411
FA core complex:HSP70s binds PKR