Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Combined Automated Annotation using Multiple IEA Methods
Leucine-rich repeat, immunoglobulin-like and transmembrane domain 3 (LRIT3) is a modulator of FGFR1.
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Overexpressed human LRIT3 increased FGFR1 exit from the ER in HEK293 cells.
"These results suggest that LRIT3 facilitates exit of FGFR1 from the ER."
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The authors explicitly frame the LRIT3-FGFR1 mechanism as unresolved and potentially influenced by receptor overexpression or serum growth factors.
"Perhaps highly over-expressed FGFR1s can interact and phosphorylate each other at the cell surface without a ligand [22]. Alternatively, stabilization and over-expression of FGFR1 simply allow cells to respond to even small amounts of growth factors in the culture medium (serum) rather than these cells become truly FGF-independent. Although the exact mechanism of action is not clear, our results strongly suggest that LRIT3 facilitates ER export of FGFR1, that FGFR1 exits the ER not in a constitutive fashion, but in a regulated fashion, and that LRIT3 modulates the FGFR-signaling pathway."
Whole-exome sequencing identifies LRIT3 mutations as a cause of autosomal-recessive complete congenital stationary night blindness.
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Biallelic LRIT3 variants were identified in human complete congenital stationary night blindness.
"Whole-exome sequencing in
one simplex cCSNB case lacking mutations in the known genes led to the
identification of a missense mutation (c.983G>A [p.Cys328Tyr]) and a nonsense
mutation (c.1318C>T [p.Arg440(∗)]) in LRIT3, encoding leucine-rich-repeat (LRR),
immunoglobulin-like, and transmembrane-domain 3 (LRIT3). Subsequent Sanger
sequencing of 89 individuals with CSNB identified another cCSNB case harboring a
nonsense mutation (c.1151C>G [p.Ser384(∗)]) and a deletion predicted to lead to
a premature stop codon (c.1538_1539del [p.Ser513Cysfs(∗)59]) in the same gene."
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Human retinal antibody staining placed LRIT3 puncta in the outer plexiform layer near bipolar-cell dendritic tips.
"Human LRIT3 antibody staining revealed in the outer plexiform layer of the human
retina a punctate-labeling pattern resembling the dendritic tips of bipolar
cells; similar patterns have been observed for other proteins implicated in
cCSNB."
LRIT3 Differentially Affects Connectivity and Synaptic Transmission of Cones to ON- and OFF-Bipolar Cells.
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Lrit3-deficient mice lose ON-pathway function and show disorganized cone-to-ON- bipolar contacts while preserving major presynaptic ultrastructure.
"Finally, synaptic contacts made
by ON-BC but not OFF-BC neurons with the cone pedicles were disorganized without
ultrastructural alterations in cone terminals, horizontal cell processes, or
synaptic ribbons."
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The study assigns LRIT3 a role in cone-to-ON-bipolar trans-synaptic organization.
"CONCLUSIONS: These results suggest that LRIT3 is likely involved in coordination
of the transsynaptic communication between cones and ON-BCs during synapse
formation and function."
Presynaptic Expression of LRIT3 Transsynaptically Organizes the Postsynaptic Glutamate Signaling Complex Containing TRPM1.
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Mouse rod-photoreceptor LRIT3 acts presynaptically and restores the postsynaptic depolarizing-bipolar-cell signalplex and rod-driven vision.
"In contrast, we
demonstrate that LRIT3 is expressed presynaptically, in rod photoreceptors
(rods), and when we restore LRIT3 expression in Lrit3-/- rods, we restore
expression of the postsynaptic glutamate signalplex and rod-driven vision."
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The authors identify LRIT3 as a trans-synaptic organizer of the postsynaptic glutamate signalplex.
"Our
results demonstrate that, in the retina, the LRR-containing protein LRIT3 acts
as a transsynaptic organizer of the postsynaptic complex required for normal
synaptic function."
LRIT3 is Required for Nyctalopin Expression and Normal ON and OFF Pathway Signaling in the Retina.
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LRIT3 associates with nyctalopin and is required for nyctalopin and TRPM1 localization at mouse depolarizing-bipolar-cell dendritic tips.
"In both male and female mice, we demonstrate
that LRIT3 interacts with and is required for expression of nyctalopin, and thus
TRPM1 at all DBC dendritic tips, but DBC signalplex components are not required
for LRIT3 expression."
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Lrit3 loss disrupts both ON and OFF retinal pathway outputs.
"Using whole-cell and multielectrode array (MEA)
electrophysiology and glutamate imaging, we demonstrate that the loss of LRIT3
impacts both ON and OFF signaling pathway function. Without LRIT3, excitatory
input to type 1 BCs is reduced, as are the visually evoked responses of many OFF
retinal ganglion cells (RGCs). We conclude that the absence of LRIT3 expression
disrupts excitatory input to OFF BCs and, thus disrupts the normal function of
OFF RGCs."
Efficient in vivo labeling of endogenous proteins with SMART delineates retina cellular and synaptic organization.
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Endogenous mouse LRIT3 tagging supports a presynaptic photoreceptor origin.
"These observations suggest that LRIT3 is confined to pre-synaptic compartment and is expressed solely by photoreceptors."
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Tagged LRIT3 was also detected in mouse cone pedicles.
"This indicates that LRIT3 is prominently present in cone synapses too and confirms its pre-synaptic origin."
Domain-specific functions of LRIT3 in synaptic assembly and retinal signal transmission.
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Mouse domain-deletion rescue shows that the LRIT3 Ig-like domain is required for TRPM1 localization and signalplex function.
"The IG domain is required for the localization of TRPM1 to the
signalplex and thus its function."
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The LRIT3 LRR domain contributes to trafficking and signalplex reassembly in a photoreceptor-type-dependent manner.
"We
show the LRR domain may be required for trafficking LRIT3 to the synapse in
cones, but not rods, and it is needed for reassembly and function of the rod BC
signalplex."
UniProtKB/Swiss-Prot record for human LRIT3 (Q3SXY7)