Selected G3V4H1 has 153 residues; reference Q9H4E5 has 214 residues.
Biopython PairwiseAligner global BLOSUM62, gap open -10, extension -0.5.
| Reference interval | Selected interval | Identical residues |
|---|---|---|
| 1–103 | 1–103 | 103 |
| 115–115 | 104–104 | 1 |
| 121–127 | 105–111 | 3 |
| 160–181 | 112–133 | 5 |
| 182–184 | 140–142 | 2 |
| 195–201 | 143–149 | 2 |
| 205–208 | 150–153 | 1 |
Reference feature mapping (sequence coverage does not establish retained function):
| Reference feature | Interval | Mapped / length | Identical |
|---|---|---|---|
| Motif: Effector region | 50–58 | 9 / 9 | 9 |
| Binding site: | 31–31 | 1 / 1 | 1 |
| Binding site: | 33–33 | 1 / 1 | 1 |
| Binding site: | 34–34 | 1 / 1 | 1 |
| Binding site: | 35–35 | 1 / 1 | 1 |
| Binding site: | 35–35 | 1 / 1 | 1 |
| Binding site: | 36–36 | 1 / 1 | 1 |
| Binding site: | 50–50 | 1 / 1 | 1 |
| Binding site: | 53–53 | 1 / 1 | 1 |
| Binding site: | 53–53 | 1 / 1 | 1 |
| Binding site: | 75–75 | 1 / 1 | 1 |
| Binding site: | 78–78 | 1 / 1 | 1 |
| Binding site: | 136–136 | 0 / 1 | 0 |
| Binding site: | 177–177 | 1 / 1 | 0 |
A shared segment does not establish that a truncated product folds, is expressed, localizes, or catalyzes the full-length reaction.
Inputs are the sibling frozen ProtNLM source and same-gene reference JSON files. Reproduce with UV_NO_SYNC=1 uv run python compare_sequences.py from this directory.