Gene Ontology annotation through association of InterPro records with GO terms

Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt

GO_REF:0000120

Combined Automated Annotation using Multiple IEA Methods

PMID:31451546

Arginine Biosynthesis Modulates Pyoverdine Production and Release in Pseudomonas putida as Part of the Mechanism of Adaptation to Oxidative Stress.

The KT2440 study reports that an individual argE mutant remains arginine prototrophic, leaving its contribution relative to ArgJ unresolved.

file:PSEPK/argE/argE-uniprot.txt

UniProtKB entry for PSEPK ArgE

Assigns Q88CJ5 to EC 3.5.1.16 and the ArgE-specific M20A family.

"Full=Acetylornithine deacetylase"

file:PSEPK/argE/argE-goa.tsv

QuickGO annotation snapshot for PSEPK ArgE

Contains the five existing annotations reviewed above.

file:PSEPK/argE/argE-deep-research-openscientist.md

OpenScientist functional synthesis for PSEPK ArgE

The report identifies the exact accession, ArgE-specific family signals, and substrate-specific hydrolysis reaction. Its claims that ArgJ is the dominant route, that ArgE is only a backup, and that PP_3571 is a second ArgE paralog are not used; it also missed the direct KT2440 argE-mutant study, which leaves route contribution unresolved.

"N-acetyl-L-ornithine + H₂O → L-ornithine + acetate"