GO_REF:0000002
Gene Ontology annotation through association of InterPro records with GO terms
GO_REF:0000033
Annotation inferences using phylogenetic trees
GO_REF:0000043
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
GO_REF:0000044
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping
GO_REF:0000052
Gene Ontology annotation based on curation of immunofluorescence data
GO_REF:0000054
Gene Ontology annotation based on curation of intracellular localizations of expressed fusion proteins
GO_REF:0000107
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
GO_REF:0000117
Electronic Gene Ontology annotations created by ARBA machine learning models
GO_REF:0000120
Combined Automated Annotation using Multiple IEA Methods
PMID:7745706
Cloning and characterization of a novel cellular protein, TDP-43, that binds to human immunodeficiency virus type 1 TAR DNA sequence motifs.
PMID:11285240
Nuclear factor TDP-43 and SR proteins promote in vitro and in vivo CFTR exon 9 skipping.
PMID:17481916
TDP43 is a human low molecular weight neurofilament (hNFL) mRNA-binding protein.
PMID:18305152
TDP-43 regulates retinoblastoma protein phosphorylation through the repression of cyclin-dependent kinase 6 expression.
PMID:19383787
Aberrant cleavage of TDP-43 enhances aggregation and cellular toxicity.
PMID:25678563
Peptidylprolyl isomerase A governs TARDBP function and assembly in heterogeneous nuclear ribonucleoprotein complexes.
PMID:27123980
USP7 and TDP-43: Pleiotropic Regulation of Cryptochrome Protein Stability Paces the Oscillation of the Mammalian Circadian Clock.
PMID:27545621
ALS Mutations Disrupt Phase Separation Mediated by α-Helical Structure in the TDP-43 Low-Complexity C-Terminal Domain.
PMID:28988034
The physical forces mediating self-association and phase-separation in the C-terminal domain of TDP-43.
PMID:29511089
TAR DNA-binding protein 43 (TDP-43) liquid-liquid phase separation is mediated by just a few aromatic residues.
PMID:15231747
A protein interaction framework for human mRNA degradation.
PMID:16169070
A human protein-protein interaction network: a resource for annotating the proteome.
PMID:18377426
Interaction of antiproliferative protein Tob with the CCR4-NOT deadenylase complex.
PMID:20740007
Ataxin-2 intermediate-length polyglutamine expansions are associated with increased risk for ALS.
PMID:21903422
Mapping a dynamic innate immunity protein interaction network regulating type I interferon production.
PMID:24169621
Elucidating novel hepatitis C virus-host interactions using combined mass spectrometry and functional genomics approaches.
PMID:24690380
Interaction of transactive response DNA binding protein 43 with nuclear factor κB in mild cognitive impairment with episodic memory deficits.
PMID:26571498
TDP-43 Inhibits NF-κB Activity by Blocking p65 Nuclear Translocation.
PMID:26752685
FIH Regulates Cellular Metabolism through Hydroxylation of the Deubiquitinase OTUB1.
PMID:27615052
A novel missense mutation of CMT2P alters transcription machinery.
PMID:28514442
Architecture of the human interactome defines protein communities and disease networks.
PMID:29109149
Chronic oxidative stress promotes GADD34-mediated phosphorylation of the TAR DNA-binding protein TDP-43, a modification linked to neurodegeneration.
PMID:29153328
TDP-43 Promotes Neurodegeneration by Impairing Chromatin Remodeling.
PMID:29725819
Senataxin mutations elicit motor neuron degeneration phenotypes and yield TDP-43 mislocalization in ALS4 mice and human patients.
PMID:32814053
Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation in Affected Brains.
PMID:35271311
OpenCell: Endogenous tagging for the cartography of human cellular organization.
PMID:37788672
Cryo-EM structure of the KLHL22 E3 ligase bound to an oligomeric metabolic enzyme.
PMID:21666678
An ALS-associated mutation affecting TDP-43 enhances protein aggregation, fibril formation and neurotoxicity.
PMID:22193716
Redox signalling directly regulates TDP-43 via cysteine oxidation and disulphide cross-linking.
PMID:23384725
Molecular mechanism of oxidation-induced TDP-43 RRM1 aggregation and loss of function.
PMID:26099433
TDP-35 sequesters TDP-43 into cytoplasmic inclusions through binding with RNA.
PMID:26735904
ALS-Causing Mutations Significantly Perturb the Self-Assembly and Interaction with Nucleic Acid of the Intrinsically Disordered Prion-Like Domain of TDP-43.
PMID:29531287
Atomic-level evidence for packing and positional amyloid polymorphism by segment from TDP-43 RRM2.
PMID:31235914
Cryo-EM structures of four polymorphic TDP-43 amyloid cores.
PMID:28335005
TDP-43 suppresses tau expression via promoting its mRNA instability.
PMID:23541532
Ubiquilin-2 (UBQLN2) binds with high affinity to the C-terminal region of TDP-43 and modulates TDP-43 levels in H4 cells: characterization of inhibition by nucleic acids and 4-aminoquinolines.
PMID:22658674
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
PMID:22681889
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
file:human/TARDBP/TARDBP-deep-research-falcon.md
Deep research report on TARDBP