ARL8B notes

Deep research attempt

just deep-research-falcon human ARL8B --fallback perplexity-lite was run on 2026-06-03. Falcon timed out after 600 seconds, and the perplexity-lite fallback failed with an API quota/401 error, so no ARL8B-deep-research-falcon.md or fallback provider report was produced. I proceeded using the fetched UniProt record, cached GOA-derived PMIDs, cached publication text, and the Proteostasis PN projection reports.

Proteostasis PN review

Fetched human ARL8B on 2026-06-03 and reviewed it in the Proteostasis PN batch. The PN projection proposes GO:0061906 autophagosome localization from the Autophagy-Lysosome Pathway node "HOPS-BORC complex bridging" [file:projects/PROTEOSTASIS/reports/pn_projection/pn_projected_candidate_additions.tsv "ARL8B\t\tGO:0061906\tautophagosome localization\tnew_to_goa"].

I treated that projection conservatively. The direct ARL8B literature strongly supports lysosomal/endolysosomal membrane localization, lysosome positioning, HOPS-linked cargo delivery to lysosomes, and autophagosome-lysosome fusion. It does not clearly show that ARL8B directly localizes autophagosomes as the transported organelle. The strongest autophagy-related ARL8B evidence is that PLEKHM1 connects ARL8B with HOPS at lysosomal contact/fusion sites and that ARL8B binding is needed for lysosomal degradation of autophagic cargo [PMID:28325809 "Arl8b mediates recruitment of HOPS complex to PLEKHM1-positive vesicle contact sites"; PMID:28325809 "Arl8b binding is crucial for PLEKHM1 to promote lysosomal degradation of endocytic and autophagic cargo"].

Core synthesis: ARL8B is best curated as a small GTPase on lysosomal/endolysosomal membranes that recruits effectors for lysosome positioning and cargo-delivery/fusion. BORC recruits ARL8B to lysosomes and enables peripheral lysosome movement PMID:25898167, SKIP/PLEKHM2 links ARL8 to kinesin-1 for plus-end-directed lysosome motility PMID:22172677, and VPS41/HOPS recruitment supports endosome/phagosome/autophagosome delivery to lysosomes PMID:21802320.

The seeded GO:0007059 chromosome segregation annotation points to PMID:14871887, which is a Drosophila Topors/Hairy ubiquitin ligase paper and appears unrelated to ARL8B PMID:14871887. The term itself has support from the ARL8B/GIE paper PMID:15331635, so I retained it as non-core and flagged the PMID mismatch in the review.

Falcon deep research findings (2026-06-07)

The Falcon report (Edison Scientific) was successfully generated (the earlier 2026-06-03 attempt had timed out). Most content CONFIRMS the existing review; one finding is genuinely NEW vs the existing annotations. Provenance below; PMIDs resolved via PubMed ID converter from DOIs.