file:human/COL1A2/COL1A2-deep-research-falcon.md
Falcon deep research report for human COL1A2
GO_REF:0000002
Gene Ontology annotation through association of InterPro records with GO terms
GO_REF:0000033
Annotation inferences using phylogenetic trees
GO_REF:0000052
Gene Ontology annotation based on curation of immunofluorescence data
GO_REF:0000107
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
GO_REF:0000117
Electronic Gene Ontology annotations created by ARBA machine learning models
PMID:17211858
Three arginine to cysteine substitutions in the pro-alpha (I)-collagen chain cause Ehlers-Danlos syndrome with a propensity to arterial rupture in early adulthood.
PMID:17217948
Inhibition of RhoA/Rho-kinase pathway suppresses the expression of type I collagen induced by TGF-beta2 in human retinal pigment epithelial cells.
PMID:17334644
Association of gene polymorphisms with blood pressure and the prevalence of hypertension in community-dwelling Japanese individuals.
PMID:1740554
Expression of type I collagen pro-alpha 2 chain mRNA in adult human permanent teeth as revealed by in situ hybridization.
PMID:17955022
Gene targeting of mutant COL1A2 alleles in mesenchymal stem cells from individuals with osteogenesis imperfecta.
PMID:18375391
Defective C-propeptides of the proalpha2(I) chain of type I procollagen impede molecular assembly and result in osteogenesis imperfecta.
PMID:1916105
Collagen family of proteins.
PMID:19932771
MMP-12 catalytic domain recognizes and cleaves at multiple sites in human skin collagen type I and type III.
PMID:20551380
Proteomics characterization of extracellular space components in the human aorta.
PMID:21362503
Protein profile of exosomes from trabecular meshwork cells.
PMID:23658023
Comparative proteomic analysis of supportive and unsupportive extracellular matrix substrates for human embryonic stem cell maintenance.
PMID:25037231
Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver.
PMID:25416956
A proteome-scale map of the human interactome network.
PMID:26848503
Mapping and Exploring the Collagen-I Proteostasis Network.
PMID:26871637
Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.
PMID:27068509
Extracellular matrix remodelling in response to venous hypertension: proteomics of human varicose veins.
PMID:27559042
Glycoproteomics Reveals Decorin Peptides With Anti-Myostatin Activity in Human Atrial Fibrillation.
PMID:28327460
Comprehensive proteomic characterization of stem cell-derived extracellular matrices.
PMID:28344315
Proteomic characterization of human multiple myeloma bone marrow extracellular matrix.
PMID:28675934
Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics.
PMID:32095531
Broadly conserved roles of TMEM131 family proteins in intracellular collagen assembly and secretory cargo trafficking.
PMID:32296183
A reference map of the human binary protein interactome.
PMID:6267597
Cloning a cDNA for the pro-alpha 2 chain of human type I collagen.
PMID:8841196
Reduced bone density and osteoporosis associated with a polymorphic Sp1 binding site in the collagen type I alpha 1 gene.
PMID:8900172
Type I, II, III, IV, V, and VI collagens serve as extracellular ligands for the isoforms of platelet-derived growth factor (AA, BB, and AB).
PMID:8982144
Genetic analysis of structural elastic fiber and collagen genes in familial adolescent idiopathic scoliosis.
Reactome:R-HSA-114577
Binding of GPVI:Fc Epsilon R1 gamma receptor complex with collagen
Reactome:R-HSA-114600
Fyn/Lyn-mediated phosphorylation of FcR1 gamma
Reactome:R-HSA-114670
GPIb-IX-V binds to vWF:Collagen complex
Reactome:R-HSA-114671
vWF binds to collagen
Reactome:R-HSA-139842
Binding of Syk tyrosine kinase
Reactome:R-HSA-1454757
Gelatin degradation by MMP1, 2, 3, 7, 8, 9, 12, 13
Reactome:R-HSA-1454822
Collagen type I degradation by MMP1,2,8,13, PRSS2
Reactome:R-HSA-1474266
Formation of collagen fibrils
Reactome:R-HSA-1650808
Prolyl 4-hydroxylase converts collagen prolines to 4-hydroxyprolines
Reactome:R-HSA-2002428
Removal of fibrillar collagen N-propeptides
Reactome:R-HSA-2002440
Removal of fibrillar collagen C-propeptides
Reactome:R-HSA-2002460
P4HB binds Collagen chains
Reactome:R-HSA-2002466
Formation of allysine by LOX
Reactome:R-HSA-2022073
Procollagen triple helix formation
Reactome:R-HSA-2089971
Secretion of collagens
Reactome:R-HSA-216045
Collagen type I binds integrin alpha11beta1
Reactome:R-HSA-2213201
Formation of collagen fibres
Reactome:R-HSA-2213205
Type XII and XIV collagens associate with type I and type II fibrils
Reactome:R-HSA-2243926
Formation of histidino-hydroxylysinonorleucine cross-links
Reactome:R-HSA-2243931
Formation of dehydro-lysinonorleucine cross-links
Reactome:R-HSA-2250301
Formation of lysyl-pyrrole cross-links
Reactome:R-HSA-2327733
FN1 binds Collagen types I-V, VII
Reactome:R-HSA-2327738
DDR1 binds collagen type I, II, III, IV, V, XI fibrils
Reactome:R-HSA-2327909
DCN binds collagen I, II, III, VI fibrils
Reactome:R-HSA-2395223
Formation of hydroxylysyl-pyridinoline cross-links
Reactome:R-HSA-2395257
Formation of dehydro-hydroxylysino-norleucine cross-links
Reactome:R-HSA-2395302
Formation of hydroxylysino-5-ketonorleucine cross-links
Reactome:R-HSA-2395314
Formation of lysino-5-ketonorleucine cross-links
Reactome:R-HSA-2395322
Formation of lysyl-pyridinoline cross-links
Reactome:R-HSA-2395324
Formation of hydroxylysyl-pyrrole cross-links
Reactome:R-HSA-2395340
Formation of hydroxyallysine by LOX
Reactome:R-HSA-2396234
Collagen type VII binds laminin-322 and collagen IV
Reactome:R-HSA-2424243
SPARC binds Collagen type I fibril, hydroxylapatite and Ca2+
Reactome:R-HSA-2424252
COMP binds collagen, fibronectin, aggrecan and matrilins
Reactome:R-HSA-2465890
DDR2 binds collagen type I, II, III, V, X fibrils
Reactome:R-HSA-2466106
BGN binds Collagen types I, VI, (IX)
Reactome:R-HSA-2473596
Collagen type I degradation by MMP15
Reactome:R-HSA-429529
Thrombin binding to GP1b:IX:V
Reactome:R-HSA-430073
GPIb-IX-V binding to 14-3-3 zeta is reduced by shear stress
Reactome:R-HSA-430076
GP1b-IX-V binds 14-3-3-zeta
Reactome:R-HSA-430096
GP1b-IX-V binds filamin
Reactome:R-HSA-437118
GPVI stimulates PI3K beta, gamma
Reactome:R-HSA-443402
GP1b-IX-V:13-3-3-zeta complexes with p85 PI3K
Reactome:R-HSA-443418
GP1b signaling involves c-Src
Reactome:R-HSA-453183
p-Y348-SYK dissociates
Reactome:R-HSA-453200
SYK autophosphorylates
Reactome:R-HSA-5696356
OSCAR binds collagen and SP-D
Reactome:R-HSA-5696357
LAIR2 binds collagen
Reactome:R-HSA-6785895
Expression of IL4, IL13-upregulated extracellular proteins
Reactome:R-HSA-8944214
Association of procollagen type I
Reactome:R-HSA-9733216
COL1A2 gene expression is stimulated by p-2S-SMAD3:p-2S-SMAD3:SMAD4
Reactome:R-HSA-9822532
ADAMTS13 cleaves VWF multimer
Reactome:R-HSA-9822539
VWF multimer binds to collagen type I
Reactome:R-HSA-9822734
Caplacizumab binds VWF
Reactome:R-HSA-9823065
GPIb:IX:V binds to VWF multimer:collagen
Reactome:R-HSA-9823593
VWF variant does not bind to collagen type I
Reactome:R-HSA-9823706
VWF variant does not bind GPIb:IX:V
Reactome:R-HSA-9824402
ADAMTS13 variant does not cleave VWF multimer
Reactome:R-HSA-9844241
ADAMTS13 cleaves VWF variant multimer
Reactome:R-HSA-9844251
GP1BA variant binds to VWF multimer:collagen
file:human/COL1A2/COL1A2-uniprot.txt
UniProt entry P08123 (CO1A2_HUMAN)
PMID:14559231
Interaction of Smads with collagen types I, III, and V.
PMID:15014448
Boca-dependent maturation of beta-propeller/EGF modules in low-density lipoprotein receptor proteins.
PMID:21124883
The translation initiation factor 3f (eIF3f) exhibits a deubiquitinase activity regulating Notch activation.
PMID:28104892
Mechanistic basis for a molecular triage reaction.