The 37 retained source contexts cover every one of the 128 current raw QuickGO records and the genuine 128-row normal TSV. The grouped HuRI source retains all 92 imported partners. These different row counts describe representation, not missing assertions. All 32 inherited excerpt occurrences are preserved; no new publication quotations are added.
The sole official natural product is Q9GZR5, 314 aa. Tagged human cDNAs, truncations, rat W246G and conditional mouse alleles are experimental contexts, not equivalent natural products. A normal cache flag describes the cached text; the assessed original scope is stated separately below.
| Reference | Cached full text | Assessed evidence and limits |
|---|---|---|
| PMID:11138005(https://pubmed.ncbi.nlm.nih.gov/11138005/) | false | The original disease-identification paper was recovered as indexed Methods, Results, Discussion and captions. It supports retinal expression, the familial 5-bp deletion and elongase homology, not GPCR photoreceptor activity or a light-detection experiment. No figure pixels or supplements were inspected. The normal cache remains abstract-only. |
| PMID:16036915(https://pubmed.ncbi.nlm.nih.gov/16036915/) | false | Recovered indexed original Methods, Results, Discussion and captions establish human retinal cDNA constructs, COS-7 ER/calnexin overlap and co-expression-dependent HEK293T copurification. Heterogeneous detergent complexes may aggregate; neither fixed oligomeric stoichiometry nor catalytic activity was established. No figure pixels, supplements or alignment of the actual insert to the current reference was available. The normal cache remains abstract-only. |
| PMID:20937905(https://pubmed.ncbi.nlm.nih.gov/20937905/) | false | Authentic main text and Figure 1 were inspected independently. Human N-terminal 3xFLAG ELOVL4 in HEK293T total membranes gave weak but significant C24:0/C26:0-CoA elongation-associated output. ER localization and CERS2 association are explicitly reported in the main text, but detailed supplementary Methods and S2/S8 images remain unavailable. C18:1 was the only MUFA in that panel; no broad MUFA inactivity or resolved product-length distribution is inferred. The normal cache remains abstract-only. |
| PMID:32296183(https://pubmed.ncbi.nlm.nih.gov/32296183/) | true | Selected original screen-generation/validation Results and discussion/extended-data legends were inspected. Literal IntAct records verify all 92 imported ELOVL4 partners, with three curated method records per pair. These support generic non-core interactions without transferring partner functions. Pair-specific orthogonal validation, actual insert sequences and the full supplementary Methods were not assessed. |
| PMID:38422897(https://pubmed.ncbi.nlm.nih.gov/38422897/) | false | The identifier and authentic abstract were checked, but operative ELOVL4-specific Methods and Results could not be recovered. The imported TECR interaction is retained as a credible unresolved assertion, not established from the HACD-focused abstract or rejected because of its title. The full-text-unavailable flag describes this access gap. |
| PMID:23479632(https://pubmed.ncbi.nlm.nih.gov/23479632/) | true | Complete cached scientific Methods, Results and Discussion were read. Endogenous mouse conditional Elovl4 loss markedly depleted retinal C30-C34 polyunsaturated products; the human disease-transgene experiment is a separate context. This is neither an isolated human enzyme assay nor proof that every disease mechanism is simple loss of function. The extraction lacks full figure captions; no pixels or separate supplements were inspected. |
| PMID:20166112(https://pubmed.ncbi.nlm.nih.gov/20166112/) | true | The authentic normal cache identifier/title and the complete current human ELOVL1/Q9BW60 donor record were verified. This reference is recorded as provenance for that paralog donor annotation; its original body was not read in this review, despite the cache having full text. No ELOVL4-specific assay or extrapolated ELOVL1 mechanism is claimed. |
| PMID:24736612(https://pubmed.ncbi.nlm.nih.gov/24736612/) | true | Complete original Methods, Results, Discussion and included table text were read. Rat retinal Elovl4 transcript abundance was rhythmic in controls and altered in diabetic animals. No Elovl4 functional perturbation or timed protein chemistry establishes the product's role in the circadian process. No figure pixels or separate supplements were inspected. |
| PMID:32780351(https://pubmed.ncbi.nlm.nih.gov/32780351/) | true | Complete original Methods, Results, Discussion and included captions were read. Rat W246G has selective lipid effects, with reduced skin very-long-chain saturated products and preserved retinal polyunsaturated products; retinal ERG effects do not resolve miniature excitatory/inhibitory current signs. The mutant is not treated as a clean null. No pixels or separate supplements were inspected. |
| PMID:37491316(https://pubmed.ncbi.nlm.nih.gov/37491316/) | false | Complete genuine PMC main HTML Methods, Results, Discussion and captions were read separately from the abstract-only normal cache. Rat W246G reduced miniature excitatory frequency but increased miniature inhibitory frequency and amplitude in the reported Purkinje-cell Results, with input-specific short-term plasticity effects. Discussion wording about inhibitory frequency is inconsistent with those Results; the actual Results govern the assessment. No pixels or supplementary raw data were inspected. |
The portable analysis reconstructs the complete PTHR11157 target path and literal IBD records. The ungapped target sequence exactly matches the official 314-aa product. All seven inherited placements are valid; current donor-list differences are shown rather than silently harmonized. Current complete rat, mouse and human ELOVL1 annotations are distinct from the ancestral placement itself.
ARBA00028259 and UR000254926 have satisfied target condition sets. ARBA00028685 retains 39 unresolved sets because FunFam assignments were not captured; ARBA00044377 returned HTTP 404. Neither gap disproves the independently supported ER location or catalytic activity. The historical UniPathway route was not recovered.
Rows 9 and 16 are explicitly lateral term changes. GO:0019368 unsaturated fatty acid elongation and GO:0006636 unsaturated fatty acid biosynthetic process do not contain one another through the captured is_a paths. GO:0042761 very long-chain fatty acid biosynthetic process and GO:0035338 long-chain fatty-acyl-CoA biosynthetic process are also lateral; the latter definition covers acyl groups of 13–22 carbons, whereas the former covers fatty acids longer than 22 carbons.
| Index | Imported term | Reference | Action | Replacement |
|---|---|---|---|---|
| 0 | GO:0005789 | GO_REF:0000033 | ACCEPT | |
| 1 | GO:0009922 | GO_REF:0000033 | ACCEPT | |
| 2 | GO:0042761 | GO_REF:0000033 | ACCEPT | |
| 3 | GO:0030148 | GO_REF:0000033 | KEEP_AS_NON_CORE | |
| 4 | GO:0034626 | GO_REF:0000033 | ACCEPT | |
| 5 | GO:0019367 | GO_REF:0000033 | ACCEPT | |
| 6 | GO:0034625 | GO_REF:0000033 | KEEP_AS_NON_CORE | |
| 7 | GO:0005783 | GO_REF:0000002 | MODIFY | GO:0005789 |
| 8 | GO:0005789 | GO_REF:0000120 | ACCEPT | |
| 9 | GO:0006636 | GO_REF:0000104 | MODIFY | GO:0019368 |
| 10 | GO:0009584 | GO_REF:0000108 | REMOVE | |
| 11 | GO:0009922 | GO_REF:0000120 | ACCEPT | |
| 12 | GO:0016020 | GO_REF:0000120 | MODIFY | GO:0005789 |
| 13 | GO:0019367 | GO_REF:0000120 | ACCEPT | |
| 14 | GO:0030497 | GO_REF:0000117 | ACCEPT | |
| 15 | GO:0034626 | GO_REF:0000120 | ACCEPT | |
| 16 | GO:0035338 | GO_REF:0000104 | MODIFY | GO:0042761 |
| 17 | GO:0042761 | GO_REF:0000120 | ACCEPT | |
| 18 | GO:0005515 | PMID:32296183 | KEEP_AS_NON_CORE | |
| 19 | GO:0005515 | PMID:38422897 | UNDECIDED | |
| 20 | GO:0007623 | GO_REF:0000107 | UNDECIDED | |
| 21 | GO:0061886 | GO_REF:0000107 | UNDECIDED | |
| 22 | GO:0097151 | GO_REF:0000107 | UNDECIDED | |
| 23 | GO:1990926 | GO_REF:0000107 | KEEP_AS_NON_CORE | |
| 24 | GO:0006633 | GO_REF:0000041 | MODIFY | GO:0042761 |
| 25 | GO:0005789 | PMID:20937905 | ACCEPT | |
| 26 | GO:0009922 | PMID:20937905 | ACCEPT | |
| 27 | GO:0009922 | GO_REF:0000024 | ACCEPT | |
| 28 | GO:0034626 | GO_REF:0000024 | ACCEPT | |
| 29 | GO:0005515 | PMID:20937905 | KEEP_AS_NON_CORE | |
| 30 | GO:0005783 | PMID:20937905 | MODIFY | GO:0005789 |
| 31 | GO:0005789 | PMID:16036915 | ACCEPT | |
| 32 | GO:0019367 | PMID:20937905 | ACCEPT | |
| 33 | GO:0042761 | GO_REF:0000024 | ACCEPT | |
| 34 | GO:0042761 | PMID:20937905 | ACCEPT | |
| 35 | GO:0006633 | PMID:11138005 | MODIFY | GO:0042761 |
| 36 | GO:0008020 | PMID:11138005 | REMOVE |
The optional full_text_unavailable flags follow the normal-cache convention for PMIDs 11138005, 16036915, 20937905, 37491316 and 38422897. The first four have separately recovered original material with the precise read scopes recorded above; their flags do not negate that access. Only 38422897 still lacks operative ELOVL4-specific evidence. No normal publication cache was edited to reconcile these distinct states.
The current annotations retain the same decisions and source fields. In particular, the circadian row is scientifically unresolved despite complete original access, and the two positive generic-binding sources remain non-core under the campaign policy. The seven IBA support lists link to the reproducible PAINT results.
The core's specific processes are saturated fatty-acid elongation and polyunsaturated fatty-acid elongation, replacing their broad elongation ancestor. Official typed is_a paths place both below GO:0030497; neither contains the other or GO:0042761, and GO:0042761 contains neither. The greater-than-22-carbon biosynthesis term therefore retains complementary chain-length information. Human ELOVL4 membrane assays support saturated substrates, while accepted PAINT evidence and endogenous mouse conditional loss support the polyunsaturated role; this does not assign a precise purified-human PUFA product distribution.
VERIFIED reference assessments concern the identified source and the stated claim, not unrestricted local availability of every experiment. The normal abstract-only caches for 11138005, 16036915, 20937905 and 37491316 remain unchanged; separately recovered original text is available only through the cited external locators and preserved private access records. For 16036915, Figure 4 refers to read text/captions, not inspected pixels. For 20937905, Figure 1 pixels were inspected, but S2 and S8B were read only as observations reported in the main Results; their detailed Methods and images remain unavailable. The portable archive contains database inputs, not article bodies, and its unchanged outputs verify those database derivations rather than publication interpretation.
The annotation support lists now cite this guide for the HuRI and CERS2 associations, the unresolved TECR source, and the short-term potentiation transfer. These are provenance links; they add no publication quotations or new annotations. All 37 actions remain unchanged.
For the affected positive claims, the original locators are:
GO:1990926 is a subtype of regulation of synaptic plasticity, GO:0048167, under modulation of chemical synaptic transmission, GO:0050804. The measured facilitation phenotype supports the retained non-core role. The annotation does not require ELOVL4 to be the neurotransmitter-release machinery or its catalytic rate to change within milliseconds. Lipid-mediated regulation is biologically grounded, while the precise link between the selective W246G lipid defect and this synaptic phenotype remains an inference. That mechanistic limit does not invalidate the observed process phenotype or warrant reversing a sign.
The two supported generic-binding rows remain KEEP_AS_NON_CORE under the explicit campaign instruction to retain supported interactions without inventing a specific molecular function. The unresolved TECR row remains UNDECIDED. A generic-term validator advisory does not negate the supporting experimental association; no main-repository policy change is proposed here.