Gene Ontology annotation through association of InterPro records with GO terms
Annotation inferences using phylogenetic trees
Combined Automated Annotation using Multiple IEA Methods
UniProtKB reviewed entry for ndhD
QuickGO GOA annotations for ndhD
OpenScientist focused report on ndhD chlororespiration and quinone binding
-
The focused report found the GO:0048039 ubiquinone-binding IBA to be wrong for NdhD because quinone binding belongs to a different subunit module and to plastoquinone in the chloroplast complex.
"Wrong subunit (NdhD = NuoM antiporter, not Q-pocket) and wrong quinone (plants use plastoquinone)."
-
The focused report found aerobic respiration definitionally inapplicable to plastid NdhD because the oxygen-consuming chlororespiration step is mediated by PTOX, not by NDH.
"Definitional mismatch; NDH does CEF/chlororespiration (ferredoxin→PQ), O2 step is PTOX."
-
The focused report found that ndhD lacks the photosynthesis light-reaction process term carried by sibling plastid NDH subunits.
"Present on ndhB1/B2 and ndhK; matches NDH's CEF role; NdhD is anomalously missing it."
An Src homology 3 domain-like fold protein forms a ferredoxin binding site for the chloroplast NADH dehydrogenase-like complex in Arabidopsis.
The higher plant plastid NAD(P)H dehydrogenase-like complex (NDH) is a high efficiency proton pump that increases ATP production by cyclic electron flow.
Alleviation of Photoinhibition by Co-ordination of Chlororespiration and Cyclic Electron Flow Mediated by NDH under Heat Stressed Condition in Tobacco.
Cryo-EM structure of the NDH-PSI-LHCI supercomplex from Spinacia oleracea.