Gene Ontology annotation through association of InterPro records with GO terms

Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity

GO_REF:0000118

TreeGrafter-generated GO annotations

GO_REF:0000120

Combined Automated Annotation using Multiple IEA Methods

file:genes/ECOLX/mcr2/mcr2-uniprot.txt

UniProt flat file for mcr2 (A0A1C3NEV1)

UniProt/CARD identity and protein naming for mcr2.

"CC -!- FUNCTION: Probably catalyzes the addition of a phosphoethanolamine CC moiety to lipid A (PubMed:30194678). Phosphoethanolamine modification CC of lipid A confers polymyxin resistance (By similarity). Confers"

file:projects/ANTIMICROBIAL_RESISTANCE/aro2go.sssom.yaml

Curated ARO to GO mapping set for AMR gene families

Manual ARO-to-GO mappings used to identify focused AMR annotation gains.

"mapping_set_title: ARO to GO mapping (AMR gene families and resistance mechanisms)"

file:projects/ANTIMICROBIAL_RESISTANCE/data/candidate_new_annotations.tsv

Annotation-gain candidates from ARO to GO mappings

Candidate GO annotations projected from the ARO-to-GO mapping set.

"Candidate GO annotations that UniProtKB entries with a CARD cross-reference would gain from the"