GO_REF:0000002

Gene Ontology annotation through association of InterPro records with GO terms

GO_REF:0000118

TreeGrafter-generated GO annotations

GO_REF:0000120

Combined Automated Annotation using Multiple IEA Methods

file:genes/SALSP/mcr-4/mcr-4-uniprot.txt

UniProt flat file for mcr-4 (A0A222YQC1)

UniProt/CARD identity and protein naming for mcr-4.

"DR CARD; ARO:3004325; MCR-4.1; ARO:0001001; antibiotic target alteration."

file:projects/ANTIMICROBIAL_RESISTANCE/aro2go.sssom.yaml

Curated ARO to GO mapping set for AMR gene families

Manual ARO-to-GO mappings used to identify focused AMR annotation gains.

"mapping_set_title: ARO to GO mapping (AMR gene families and resistance mechanisms)"

file:projects/ANTIMICROBIAL_RESISTANCE/data/candidate_new_annotations.tsv

Annotation-gain candidates from ARO to GO mappings

Candidate GO annotations projected from the ARO-to-GO mapping set.

"Candidate GO annotations that UniProtKB entries with a CARD cross-reference would gain from the"