Gene Ontology annotation through association of InterPro records with GO terms
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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SwissProt keyword-derived (SPKW) annotations present in the Sept 2025 goa_uniprot_gcrp snapshot but removed from the current GOA release after GOA retired the keyword2GO pipeline for cellular organisms.
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For MPK4a, the "Immunity / Innate immunity / Plant defense" keywords mapped to broad parents (innate immune response, defense response) of the specific, experimentally supported "pattern recognition receptor signaling pathway" already present in GOA; their removal therefore lost little information.
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Automatic assignment of GO terms using logical inference, based on on inter-ontology links
Automatic Gene Ontology annotation based on Rhea mapping
Electronic Gene Ontology annotations created by ARBA machine learning models
Combined Automated Annotation using Multiple IEA Methods
An Innate Immunity Pathway in the Moss Physcomitrella patens.
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MPK4a (and paralog MPK4b) are phosphorylated and activated in response to PAMPs; chitin activation requires a chitin receptor and upstream MAPKKK and MAPKK kinases, defining a CERK1->MEKK1a/b->MKK1a/b/c->MPK4a/b cascade.
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The pathway induces rapid growth inhibition, a fluorescence burst, cell-wall depositions and accumulation of defense-related transcripts.
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Δmpk4a knockout lines appear morphologically wild-type but have increased susceptibility to the necrotrophic fungi Botrytis cinerea and Alternaria brassicicola, reduced chitin-induced cell-wall depositions and reduced induction of PAL4, CHS, ERF2, alpha-DOX and LOX7 defense transcripts.
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MPK4a is NOT activated by ABA or osmotic stress (NaCl, mannitol), which instead activate SnRK2 kinases; MPK4a signaling appears specific to immunity in moss.
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MPK4a is dually phosphorylated on Thr-197/Tyr-199 (TEY motif), localizes to cytoplasm and nucleus, and its transcript is chitosan-inducible (~8-fold peak at 2 h).
Deep-research report (falcon / Edison Scientific Literature) - functional annotation of Physcomitrium patens MPK4a (A9T142).
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Synthesizes the Bressendorff et al. 2016 study (Plant Cell, DOI 10.1105/tpc.15.00774, = PMID:27268428), concluding MPK4a is a PAMP-responsive MAP kinase functioning in moss pattern-triggered immunity downstream of chitin perception (CERK1) and upstream of transcriptional and cell-wall defense outputs.
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MPK4a kinase activity is demonstrated by in-gel and immunoprecipitation kinase assays on the MPK4a-GFP knock-in line (MBP substrate); the MPK4a band is ~42.8 kD and the MPK4a-GFP fusion ~70 kD; no endogenous in vivo substrate has been identified.
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MPK4a-GFP localizes to both cytoplasm and nucleus (strongest in apical caulonemal cells, rhizoids and newly formed apical tip cells), with no major relocalization after chitin treatment.
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Δmpk4a knockouts are near-normal morphologically but show reduced chitin-induced cell-wall depositions, reduced defense-gene induction and increased susceptibility to necrotrophic fungi (B. cinerea, A. brassicicola).
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MPK4a is rapidly activated by chitin/chitosan and peptidoglycan (within ~1 min) but is not activated by 500 mM NaCl, 800 mM mannitol or 10 mM ABA, which instead activate SnRK2-class kinases - indicating immunity-specific specialization distinct from Arabidopsis MPK4.