Gene Ontology annotation through association of InterPro records with GO terms
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Gene Ontology annotation based on curation of immunofluorescence data
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Combined Automated Annotation using Multiple IEA Methods
LEPREL1, a novel ER and Golgi resident member of the Leprecan family.
-
LEPREL1/P3H2 is an 80 kDa, 708-residue ER/Golgi-resident protein of the leprecan family with a signal sequence, four TPRs, a P4Halpha domain, and a C-terminal KDEL ER-retention motif; over-expression perturbs ER PDI staining.
Characterization of recombinant human prolyl 3-hydroxylase isoenzyme 2, an enzyme modifying the basement membrane collagen IV.
-
Recombinant human P3H2 has prolyl 3-hydroxylase activity on (Gly-Pro-4Hyp)5 and preferentially hydroxylates collagen IV-derived peptides over a collagen I site, identifying P3H2 as the collagen IV-modifying isoenzyme; it is enriched in basement-membrane-rich tissues such as kidney and does not require CRTAP.
The prolyl 3-hydroxylases P3H2 and P3H3 are novel targets for epigenetic silencing in breast cancer.
Post-translational modification of type IV collagen with 3-hydroxyproline affects its interactions with glycoprotein VI and nidogens 1 and 2.
Prolyl 3-Hydroxylase 2 Is a Molecular Player of Angiogenesis.
Loss of the collagen IV modifier prolyl 3-hydroxylase 2 causes thin basement membrane nephropathy.
-
P3H2 was identified as a glomerular basement membrane (GBM) modifier in a cohort of patients with albuminuria; it 3-hydroxylates prolines in collagen IV subchains in the ER, and podocyte-specific loss in mice produces a thin basement membrane nephropathy (TBMN) phenotype with progressive microhematuria and microalbuminuria. Loss/mutation of P3H2 causes TBMN and focal segmental glomerulosclerosis (FSGS) in mice and humans.
Collagen prolyl 3-hydroxylase converts 4-Hyp collagen to 3,4-Hyp collagen
Prolyl 3-hydroxylases:Fe2+:3,4-Hyp collagen propeptides dissociates
P3HB binds 4-Hyp-collagen propeptides
UniProt entry Q8IVL5 (P3H2_HUMAN), prolyl 3-hydroxylase 2
-
ER-lumenal 2-oxoglutarate/Fe(II)-dependent dioxygenase (EC 1.14.11.7) that 3-hydroxylates procollagen prolyl residues (high activity on collagen IV/COL4A1, lower on COL1A1); uses Fe cation and L-ascorbate cofactors; contains an Fe2OG dioxygenase domain and a C-terminal KDEL-type ER-retention motif; ER/sarcoplasmic reticulum/Golgi localization; loss-of-function variant causes MCVD high myopia.