Gene Ontology annotation through association of InterPro records with GO terms
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Automatic assignment of GO terms using logical inference
Electronic Gene Ontology annotations created by ARBA machine learning models
Combined Automated Annotation using Multiple IEA Methods
Mutation of a putative mitochondrial iron transporter gene (ABC7) in X-linked sideroblastic anemia and ataxia (XLSA/A).
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Established ABCB7 as the causative gene for XLSA/A
"These data indicate that ABC7 is the causal gene of XLSA/A and that XLSA/A is a mitochondrial disease caused by a mutation in the nuclear genome"
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Showed human ABCB7 can complement yeast ATM1 deletion
"the human wild-type ABC7 protein was able to complement ATM1 deletion in yeast"
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I400M mutation causes partial loss of function
"Introduction of the corresponding mutation into the Saccharomyces cerevisiae ATM1 gene resulted in a partial loss of function of the yeast Atm1 protein"
Identification of a mammalian mitochondrial porphyrin transporter.
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Study primarily about ABCB6 outer mitochondrial membrane transporter
"Here we demonstrate that ABCB6 is uniquely located in the outer mitochondrial membrane and is required for mitochondrial porphyrin uptake"
RNA silencing of the mitochondrial ABCB7 transporter in HeLa cells causes an iron-deficient phenotype with mitochondrial iron overload.
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ABCB7 knockdown causes 6-fold increase in mitochondrial iron
"a large approximately 6-fold increase of iron accumulation in the mitochondria"
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Cytosolic iron deficiency phenotype
"The phenotype of the ABCB7-deficient cells was characterized by a strong reduction in proliferation rate that was not rescued by iron supplementation, by evident signs of iron deficiency"
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Reduced cytosolic aconitase/IRP1 activity
"aconitase activity, particularly that of the cytosolic, IRP1 form, was reduced"
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Increased protoporphyrin IX and higher sensitivity to H2O2
"The cells showed an increase of protoporphyrin IX, a higher sensitivity to H(2)O(2) toxicity, and a reduced activity of mitochondrial superoxide dismutase 2 (SOD2)"
Shifting the paradigm: the putative mitochondrial protein ABCB6 resides in the lysosomes of cells and in the plasma membrane of erythrocytes.
PAAT, a novel ATPase and trans-regulator of mitochondrial ABC transporters, is critically involved in the maintenance of mitochondrial homeostasis.
Dimeric ferrochelatase bridges ABCB7 and ABCB10 homodimers in an architecturally defined molecular complex required for heme biosynthesis.
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FECH-ABCB7-ABCB10 complex identified by crosslinking/MS
"By combining chemical crosslinking, tandem mass spectrometry and mutational analyses, we characterized a complex formed of ferrochelatase, ABCB7 and ABCB10, and mapped the interfaces of interactions of its components"
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Dimeric FECH bridges ABCB7 and ABCB10 homodimers
"A dimeric ferrochelatase physically bridged ABCB7 and ABCB10 homodimers by binding near the nucleotide-binding domains of each ABC transporter"
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ABCB7 knockdown destabilizes FECH
"We found that knockdown of ABCB7 led to significant loss of mitochondrial Fe-S proteins, which preceded the development of milder defects in cytosolic Fe-S enzymes"
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ABCB7 deficiency causes hemoglobinization defect
"erythroid cells lacking ABCB7 showed a profound hemoglobinization defect"
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Iron distribution alterations with ABCB7 loss
"In erythroid cells, loss of ABCB7 altered cellular iron distribution and caused mitochondrial iron overload"
Evolution of the human mitochondrial ABCB7 [2Fe-2S](GS)(4) cluster exporter and the molecular mechanism of an E433K disease-causing mutation.
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ABCB7 exports [2Fe-2S](GS)4 clusters
"It has been shown that the yeast mitochondrial transporter Atm1 can export glutathione-coordinated iron-sulfur clusters, [2Fe-2S](SG)4, providing a source of cluster units for cytosolic iron-sulfur cluster assembly systems"
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E433K mutation impairs transport and function
"a functional comparison of native human protein, versus a disease-causing mutant, demonstrates a key role for residue E433 in promoting cluster transport"
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ABCB7 exports Fe-S clusters to cytosol
"Iron-sulfur cofactors are assembled primarily in mitochondria and are then exported to the cytosol by use of an ABCB7 transporter"
Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context.
Cloning and chromosomal mapping of a novel ABC transporter gene (hABC7), a candidate for X-linked sideroblastic anemia with spinocerebellar ataxia.
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Original cloning of human ABCB7
"We isolated a novel human ATP-binding cassette (ABC) transporter cDNA, determined its nucleotide sequence, and designated it human ABC7 (hABC7)"
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Identified homology to yeast ATM1
"The nucleotide sequence was highly homologous to the ATM1 gene in yeast, which encodes an ABC transporter"
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Mapped to Xq13.1-q13.3
"We mapped the hABC7 gene to chromosome Xq13.1-q13.3 by fluorescence in-situ hybridization"
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Predicted mitochondrial inner membrane localization
"this product is also likely to be located in the mitochondrial inner membrane"
ABC7, mABC1 and mABC2 mediate heme transport
Deep research report on ABCB7
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ABCB7 exports glutathione-coordinated Fe-S species
"ABCB7 exports a mitochondrially generated, glutathione-dependent sulfur/Fe-S intermediate to the cytosol, enabling maturation of cytosolic and nuclear Fe-S proteins"
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ATPase activity stimulated by substrates
"Human ABCB7 reconstituted in proteoliposomes shows ATPase stimulation by glutathione and [2Fe-2S](GS)4"
Deep research report on ABCB7 (Cyberian)
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Cryo-EM structure of human ABCB7 determined
"The structure of AMP-PNP-bound human ABCB7 reveals an inverted V-shaped homodimeric architecture with an inward-facing open conformation"
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Substrate binding KD approximately 68 uM for GSH-Fe-S
"Biochemical studies demonstrated that glutathione-bound [2Fe-2S] clusters substantially increase the ATPase activity of ABCB7-type transporters, with a dissociation constant (KD) of approximately 68 uM"
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ABCB7 essential for B cell development
"Conditional deletion of Abcb7 in mice causes a severe block in bone marrow B cell development at the pro-B cell stage, where cells undergo rapid proliferation"
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Arginine-rich motif binds substrate
"Structural modeling identified a potential substrate-binding site composed of a conserved arginine-rich region (Arg313, Arg315, Arg317, Arg319 in human ABCB7) that forms a positively-charged pocket capable of binding the negatively charged cluster complex"
Cryo-EM structure of AMP-PNP-bound human mitochondrial ATP-binding cassette transporter ABCB7.
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First cryo-EM structure of human ABCB7
"The AMP-PNP-bound human ABCB7 shows an inverted V-shaped homodimeric architecture with an inward-facing open conformation"
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One AMP-PNP and Mg2+ bound per NBD
"One AMP-PNP molecule and Mg2+ were identified in each nucleotide-binding domain (NBD) of the hABCB7 monomer"
The mitochondrial iron transporter ABCB7 is required for B cell development, proliferation, and class switch recombination in mice.
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ABCB7 essential for B cell development at pro-B stage
"Conditional deletion of ABCB7 using Mb1-cre resulted in a severe block in bone marrow B cell development at the pro-B cell stage"
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ABCB7-deficient B cells show replication-induced DNA damage
"loss of ABCB7 led to replication-induced DNA damage in pro-B cells, independent of VDJ recombination, and these cells had evidence of slowed DNA replication"
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Increased intracellular iron in ABCB7-deficient cells
"Iron accumulation in ABCB7-deficient pro-B cells"
Crystal structures of nucleotide-free and glutathione-bound mitochondrial ABC transporter Atm1.
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First crystal structures of Atm1 at 3.06-3.38 A resolution
"we report the crystal structures of free and glutathione-bound Atm1 in inward-facing, open conformations at 3.06- and 3.38-angstrom resolution, respectively"
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Glutathione binding site near E433 equivalent
"The glutathione binding site includes a residue mutated in XLSA/A and is located close to the inner membrane surface in a large cavity"
Structures of Atm1 provide insight into [2Fe-2S] cluster export from mitochondria.
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Cryo-EM structures of CtAtm1 at 2.8-3.2 A resolution
"Here, we report a series of cryo-electron microscopy structures of a eukaryotic homolog of human ABCB7, CtAtm1, determined at average resolutions ranging from 2.8 to 3.2 Å, complemented by functional characterization and molecular docking in silico"
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Glutathione-complexed Fe-S clusters as cargo
"We propose that CtAtm1 accepts delivery from glutathione-complexed iron-sulfur clusters"
A structural model for glutathione-complexed iron-sulfur cluster as a substrate for ABCB7-type transporters.
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GSH-Fe-S stimulates ATPase activity
"Glutathione-complexed [2Fe-2S] cluster is shown to significantly stimulate the ATPase activity of an ABCB7-type transporter in both solution and proteoliposome-bound forms"
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KD approximately 68 uM for GSH-Fe-S binding
"Glutathione-complexed [2Fe-2S] cluster is shown to significantly stimulate the ATPase activity of an ABCB7-type transporter in both solution and proteoliposome-bound forms (KD ∼ 68 μM)"
Glutathione-coordinated [2Fe-2S] cluster - a viable physiological substrate for mitochondrial ABCB7 transport.
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GSH-Fe-S is viable substrate for Atm1p transport
"The glutathione-coordinated [2Fe-2S] cluster is demonstrated to be a viable and likely substrate for physiological iron-sulfur cluster transport by Atm1p, a mitochondrial ABC export protein"
The mitochondrial proteins Atm1p and Nfs1p are essential for biogenesis of cytosolic Fe/S proteins.
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Atm1p essential for cytosolic Fe-S protein biogenesis
"The ATP-binding cassette (ABC) transporter Atm1p of the mitochondrial inner membrane performs an essential function only in the generation of cytosolic Fe/S proteins by mediating export of Fe/S cluster precursors synthesized by Nfs1p and other mitochondrial proteins"