GATA3: selected original evidence beyond the publication cache

These selected observations come from original supplements or original article text. They are distinct from the text available in publications/PMID_*.md. Spreadsheet row numbers below are one-based Excel rows, including headers. Hashes identify the exact original files inspected; the selected cells make the target assignments inspectable without private workspace files. They do not claim that every experiment, image or supplement was read.

ECM1 receptor binding and GATA3 transcriptional regulation

PMID:21217760(https://pubmed.ncbi.nlm.nih.gov/21217760/), original article, and publisher supplement.

The original supplement is 646,888 bytes, SHA-256 ec4fb24da2a189cc170094aa68bd425025903d8f0a2da84fd28ec5989c30f8b6. Supplementary Figure 10 on PDF page 11 separates nuclear GATA3 regulation of Ecm1 from secreted ECM1 interaction with the IL-2 receptor. That page's diagram and caption were inspected; the other nine supplemental legends were read as text. This is external original evidence, not content claimed to be in the abstract-only cache.

Selected original main text was accessible through the author-uploaded article. Figure 2 describes GATA3 regulation of Ecm1; Figure 8d and its caption identify ECM1 as the protein tested with CD25, CD122 and CD132 in HEK293T cells, with CD122 association reported. The selected IP Methods were read. The publisher main page was paywalled and the direct local author-page request failed; this was a selected public text rendering, not a complete main-paper or main-image inspection.

The review's short literal abstract anchor is in the IL-2-receptor-binding row. The source distinction supports a query about the traced GATA3 annotation; it does not establish that GATA3 can never bind any receptor.

Positive target pairs in original interaction tables

PMID:25910212(https://pubmed.ncbi.nlm.nih.gov/25910212/): original Table S3 workbook, 281,392 bytes, SHA-256 c401dffd03b173062a91ecb9dfcbd424319582d70498cef269bbce0af13492ec.

Selected factual cells from sheet Table S3A:

Excel row Tested allele Gene ID Partner Partner gene ID Y2H score
42 ACTN2, 88_0 88 GATA3 2625 1
70 ACTN2, p.Q9R 88 GATA3 2625 0
98 ACTN2, p.D475N 88 GATA3 2625 0
126 ACTN2, p.M604V 88 GATA3 2625 0

The table supports the positive wild-type screen pair and allele-dependent assay differences. It does not establish an endogenous ACTN2-dependent function for GATA3 or equivalent behavior of modern GATA3 products. The functional-information judgment on generic protein binding preserves this measured interaction.

PMID:32814053(https://pubmed.ncbi.nlm.nih.gov/32814053/): original institutional supplement archive, 17,880,130 bytes, SHA-256 51d6e36f2c7befb3ef518dc916e67306fb42e69885d4cf314d053e1507d233f8. Its workbook 1-s2.0-S2211124720310354-mmc3.xlsx is 1,828,047 bytes, SHA-256 8022031dc6c71bd15b149e2768fe510c45057f3921921b2c658ced53cb77f8bb.

Selected factual cells from sheet NN1.0:

Excel row Gene A Gene ID A Gene B Gene ID B
3715 CHAT 1103 GATA3 2625
3716 EGR2 1959 GATA3 2625
3717 FGFR3 2261 GATA3 2625

The same pairs occur in NN1.0ext, rows 8110–8112. These are target-specific positive screen records. They do not by themselves establish a native signaling complex, a catalytic role for GATA3, binding to an assembled receptor complex or target-specific validation in every orthogonal assay described by the paper.

GATA3 constructs and sequence-specific DNA recognition

PMID:28473536(https://pubmed.ncbi.nlm.nih.gov/28473536/): original supplementary tables S1–S6, 5,712,247 bytes, SHA-256 4994eb7b3e33eb301541cf7d53d8be0936d5bdb6b504f5d63719e133f40004a6.

S1 sequence information, Excel row 295, identifies GATA3 and supplies two construct sequences. After removal of the table's terminal stop marker, the full-length sequence is exactly the 444-residue P23771-2 sequence. The extended DNA-binding construct is 144 residues and exactly matches P23771-1 residues 238–381; it lacks the extra glutamate present in product 2. These comparisons use the complete sequences preserved in the source-evidence file.

S2 PWM models, rows 8198, 8203, 8208 and 8213, provide GATA3 full-length methylated/unmethylated model records. S3 rows 36 and 549 record the full-length methylation classification. The table's final/bisulfite classification and methyl-SELEX classification are kept distinct; no equality of the two natural products is inferred.

Selected original Methods describe tagged recombinant human transcription-factor constructs expressed in bacteria, purification, double-stranded selection libraries and enrichment-based motif inference. These target records support sequence-specific DNA recognition. They do not independently establish promoter specificity, precise affinity constants, endogenous product-specific functions or a GATA3 crystal structure. Promoter specificity and transcriptional activity in the review use separate primary evidence.

Development of cochlear wiring

PMID:23426694(https://pubmed.ncbi.nlm.nih.gov/23426694/) · original PMC article.
Original HTML: 226,533 bytes; SHA-256 2be9fec2f6025db6862b9a057690238aec68c00f16d346826fd6f2c378e5c55c.

Mouse Bhlhb5-Cre deletion after auditory-neuron specification disrupts peripheral radial bundles, neurite-growth timing and developmental transcription. Gross cochlear size/shape and initial auditory identity remain largely preserved. Inspected Methods and Results, including textual Figures 2–7 captions, establish developmental work within the cochlea; they do not demonstrate initial organ-specification failure. Images and full supplements were not independently inspected. The normal cache remains partial.

Construction of the nascent nephric duct

PMID:16319112(https://pubmed.ncbi.nlm.nih.gov/16319112/) · publisher DOI · author-uploaded original.

The author-indexed original Methods, ectopic-duct Results, Figure 6 caption and Discussion describe mouse germline exon-4 deletion. During E9.0–9.5, multiple disorganized E-cadherin/GFP-positive structures replace one organized nascent tube. The authors favor disturbed tubulogenesis/proliferation with specification markers retained. The normal cache remains abstract-only. Local HTML/PDF attempts failed; indexed original text was readable. Figure images and all later budding assays were not independently inspected.