file:yeast/GCN5/GCN5-deep-research-falcon.md
Falcon deep research report for GCN5
file:yeast/GCN5/GCN5-uniprot.txt
UniProt record for yeast GCN5
GO_REF:0000002
Gene Ontology annotation through association of InterPro records with GO terms
GO_REF:0000033
Annotation inferences using phylogenetic trees
GO_REF:0000043
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
GO_REF:0000044
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping
GO_REF:0000116
Automatic Gene Ontology annotation based on Rhea mapping
GO_REF:0000117
Electronic Gene Ontology annotations created by ARBA machine learning models
GO_REF:0000120
Combined Automated Annotation using Multiple IEA Methods
PMID:7862114
ADA3, a putative transcriptional adaptor, consists of two separable domains and interacts with ADA2 and GCN5 in a trimeric complex
PMID:8601308
Tetrahymena histone acetyltransferase A - a homolog to yeast Gcn5p linking histone acetylation to gene activation
PMID:9224714
Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex.
PMID:9674426
A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation
PMID:10026213
Expanded lysine acetylation specificity of Gcn5 in native complexes
PMID:10430873
Crystal structure and mechanism of histone acetylation of the yeast GCN5 transcriptional coactivator
PMID:10490601
The ADA complex is a distinct histone acetyltransferase complex in Saccharomyces cerevisiae
PMID:10549298
Transcriptional activation by Gcn4p involves independent interactions with the SWI/SNF complex and the SRB/mediator
PMID:10864329
Redundant roles for the TFIID and SAGA complexes in global transcription
PMID:11080160
The structural basis for the recognition of acetylated histone H4 by the bromodomain of histone acetyltransferase gcn5p
PMID:11545749
Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin
PMID:11867538
Hyperacetylation of chromatin at the ADH2 promoter allows Adr1 to bind in repressed conditions
PMID:12446794
The novel SLIK histone acetyltransferase complex functions in the yeast retrograde response pathway
PMID:15647753
Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation
PMID:18039853
Gcn5p plays an important role in centromere kinetochore function in budding yeast
PMID:18250157
Acetylation of conserved lysines in the catalytic core of cyclin-dependent kinase 9 inhibits kinase activity and regulates transcription
PMID:18458063
Chaperone control of the activity and specificity of the histone H3 acetyltransferase Rtt109
PMID:19822662
NuA4 lysine acetyltransferase Esa1 is targeted to coding regions and stimulates transcription elongation with Gcn5
PMID:20126658
Biochemical profiling of histone binding selectivity of the yeast bromodomain family
PMID:22932476
The nuclear localization of SWI/SNF proteins is subjected to oxygen regulation
PMID:25216679
Architecture of the Saccharomyces cerevisiae SAGA transcription coactivator complex
PMID:28426094
SIRT7-dependent deacetylation of CDK9 activates RNA polymerase II transcription
PMID:28918903
SAGA is a general cofactor for RNA polymerase II transcription
PMID:31699900
Gcn5 and Esa1 function as histone crotonyltransferases to regulate crotonylation-dependent transcription
PMID:33864814
SAGA and SAGA-like SLIK transcriptional coactivators are structurally and biochemically equivalent
PMID:10688190
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
PMID:11805837
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
PMID:12186975
SALSA, a variant of yeast SAGA, contains truncated Spt7, which correlates with activated transcription
PMID:14660704
Applicability of tandem affinity purification MudPIT to pathway proteomics in yeast
PMID:14718168
Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery
PMID:15506919
Proteomic analysis of chromatin-modifying complexes in Saccharomyces cerevisiae identifies novel subunits
PMID:16429126
Proteome survey reveals modularity of the yeast cell machinery
PMID:16554755
Global landscape of protein complexes in the yeast Saccharomyces cerevisiae
PMID:16888622
SAGA binds TBP via its Spt8 subunit in competition with DNA - implications for TBP recruitment
PMID:20434206
Structural basis for assembly and activation of the heterotetrameric SAGA histone H2B deubiquitinase module
PMID:21179020
Defining the budding yeast chromatin-associated interactome
PMID:21376235
Mpk1 MAPK association with the Paf1 complex blocks Sen1-mediated premature transcription termination
PMID:21734642
Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes
PMID:24550006
The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation
PMID:25441028
Mapping the deubiquitination module within the SAGA complex
PMID:25473596
Comprehensive analysis of interacting proteins and genome-wide location studies of the Sas3-dependent NuA3 histone acetyltransferase complex
PMID:37968396
The social and structural architecture of the yeast protein interactome
PMID:30224453
Structural basis for activation of SAGA histone acetyltransferase Gcn5 by partner subunit Ada2.