Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Gene Ontology annotation based on curation of immunofluorescence data
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Electronic Gene Ontology annotations created by ARBA machine learning models
Combined Automated Annotation using Multiple IEA Methods
Identification and characterization of a mammalian 39-kDa poly(ADP-ribose) glycohydrolase.
The structure of human ADP-ribosylhydrolase 3 (ARH3) provides insights into the reversibility of protein ADP-ribosylation.
The 39-kDa poly(ADP-ribose) glycohydrolase ARH3 hydrolyzes O-acetyl-ADP-ribose, a product of the Sir2 family of acetyl-histone deacetylases.
Functional localization of two poly(ADP-ribose)-degrading enzymes to the mitochondrial matrix.
Hydrolysis of O-acetyl-ADP-ribose isomers by ADP-ribosylhydrolase 3.
ADP-ribosylhydrolase 3 (ARH3), not poly(ADP-ribose) glycohydrolase (PARG) isoforms, is responsible for degradation of mitochondrial matrix-associated poly(ADP-ribose).
ADP-ribosyl-acceptor hydrolase 3 regulates poly (ADP-ribose) degradation and cell death during oxidative stress.
Serine ADP-ribosylation reversal by the hydrolase ARH3.
Proteomic analyses identify ARH3 as a serine mono-ADP-ribosylhydrolase.
Structure of human ADP-ribosyl-acceptor hydrolase 3 bound to ADP-ribose reveals a conformational switch that enables specific substrate recognition.
Structure-function analyses reveal the mechanism of the ARH3-dependent hydrolysis of ADP-ribosylation.
Biallelic Mutations in ADPRHL2, Encoding ADP-Ribosylhydrolase 3, Lead to a Degenerative Pediatric Stress-Induced Epileptic Ataxia Syndrome.
Bi-allelic ADPRHL2 Mutations Cause Neurodegeneration with Developmental Delay, Ataxia, and Axonal Neuropathy.
PARP1 inhibition alleviates injury in ARH3-deficient mice and human cells.
The ARH and Macrodomain Families of α-ADP-ribose-acceptor Hydrolases Catalyze α-NAD(+) Hydrolysis.
A reference map of the human binary protein interactome.
An HPF1/PARP1-Based Chemical Biology Strategy for Exploring ADP-Ribosylation.
Molecular Tools for the Study of ADP-Ribosylation: A Unified and Versatile Method to Synthesise Native Mono-ADP-Ribosylated Peptides.
Structural and biochemical analysis of human ADP-ribosyl-acceptor hydrolase 3 reveals the basis of metal selectivity and different roles for the two magnesium ions.
Unrestrained poly-ADP-ribosylation provides insights into chromatin regulation and human disease.
Mechanistic insights into the three steps of poly(ADP-ribosylation) reversal.
Biallelic ADPRHL2 mutations in complex neuropathy affect ADP ribosylation and DNA damage response.
The regulatory landscape of the human HPF1- and ARH3-dependent ADP-ribosylome.
Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context.
Serine ADP-ribosylation in Drosophila provides insights into the evolution of reversible ADP-ribosylation signalling.
Reversal of tyrosine-linked ADP-ribosylation by ARH3 and PARG.
Resolution of AP sites via the multiple-nucleotide patch replacement pathway
ADPRHL2 hydrolyses poly(ADP-ribose)
ADPRS computed evidence for the GO annotation review
-
Fully paginated PANTHER node checks found that both ADPRS IBA nodes reach ADPRS orthologs and not the ADPRH or ADPRHL1 paralogues.
"**Neither node reaches either paralogue** - which is the result that matters for a family whose three members have different specificities"
-
The superoxide-response annotation propagates from hydrogen-peroxide experiments rather than from a superoxide response.
"Both experiments behind the term used hydrogen peroxide; neither mentions superoxide."
-
Reactome projects GO:0006287 from a nucleoplasmic pathway to ADPRS even though the gene-specific ADPRS reaction is mitochondrial.
"Reference-projection test on `Reactome:R-HSA-110373`: 5 annotations over 5 entities - ADPRS, FEN1, LIG1, PARG, POLB - all to GO:0006287."
-
The two HuRI protein-binding rows come from one yeast two-hybrid screen split across three IntAct sub-method records.
"The three records per partner are sub-methods of one HuRI screen, which is what UniProt's `NbExp=3` counts."