ProtNLM2 External predictions
View prediction review YAML · A0A8C9H4D2-protnlm-predictions-review.yaml · Review status: COMPLETE
The OLFML2A subfamily assignment and experimentally grounded mouse Olfml2a annotations support inferred extracellular matrix localization and involvement in matrix organization. These are ortholog-based gene-product inferences; secretion and function of the deposited 439-residue primate sequence have not been demonstrated.
Source documents: genes/9PRIM/A0A8C9H4D2/A0A8C9H4D2-uniprot.txt · genes/9PRIM/A0A8C9H4D2/A0A8C9H4D2-goa.tsv · publications/PMID_15836428.md · genes/9PRIM/A0A8C9H4D2/A0A8C9H4D2-prediction-evidence/Q8BHP7-uniprot.txt · genes/9PRIM/A0A8C9H4D2/A0A8C9H4D2-prediction-evidence/Q8BHP7-matrix-organization-quickgo.json · publications/PMID_18757743.md
Review score: 2 = concordant with evidence; 1 = uncertain; 0 = discordant with evidence. This is an assessment score, not a model probability.
- file:9PRIM/A0A8C9H4D2/A0A8C9H4D2-uniprot.txt: "ID A0A8C9H4D2_9PRIM Unreviewed; 439 AA. ... DR InterPro; IPR003112; Olfac-like_dom. ... DR PANTHER; PTHR23192:SF29; OLFACTOMEDIN-LIKE PROTEIN 2A; 1. ... FT DOMAIN 181..439 ... FT /note="Olfactomedin-like""
- PMID:15836428: "preferentially bound to chondroitin sulphate-E and heparin"
- file:9PRIM/A0A8C9H4D2/A0A8C9H4D2-prediction-evidence/Q8BHP7-uniprot.txt: "ID OLM2A_MOUSE Reviewed; 681 AA. ... DE AltName: Full=Photomedin-1; ... GN Name=Olfml2a; ... CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:15836428}. ... DR GO; GO:0031012; C:extracellular matrix; IDA:MGI. ... DR GO; GO:0007165; P:signal transduction; IBA:GO_Central. ... DR PANTHER; PTHR23192:SF29; OLFACTOMEDIN-LIKE PROTEIN 2A; 1. ... FT SIGNAL 1..32 ... FT DOMAIN 423..681 ... FT /note="Olfactomedin-like""
- file:9PRIM/A0A8C9H4D2/A0A8C9H4D2-uniprot.txt: "ID A0A8C9H4D2_9PRIM Unreviewed; 439 AA. ... DR InterPro; IPR003112; Olfac-like_dom. ... DR PANTHER; PTHR23192:SF29; OLFACTOMEDIN-LIKE PROTEIN 2A; 1. ... FT DOMAIN 181..439 ... FT /note="Olfactomedin-like""
- PMID:15836428: "preferentially bound to chondroitin sulphate-E and heparin"
- file:9PRIM/A0A8C9H4D2/A0A8C9H4D2-prediction-evidence/Q8BHP7-uniprot.txt: "ID OLM2A_MOUSE Reviewed; 681 AA. ... DE AltName: Full=Photomedin-1; ... GN Name=Olfml2a; ... CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:15836428}. ... DR GO; GO:0030198; P:extracellular matrix organization; IDA:MGI. ... DR GO; GO:0007165; P:signal transduction; IBA:GO_Central. ... DR PANTHER; PTHR23192:SF29; OLFACTOMEDIN-LIKE PROTEIN 2A; 1. ... FT SIGNAL 1..32 ... FT DOMAIN 423..681 ... FT /note="Olfactomedin-like""
- file:9PRIM/A0A8C9H4D2/A0A8C9H4D2-prediction-evidence/Q8BHP7-matrix-organization-quickgo.json: ""geneProductId": "UniProtKB:Q8BHP7", "qualifier": "acts_upstream_of_or_within", "goId": "GO:0030198", "goName": null, "goEvidence": "IDA" ... "reference": "PMID:18757743" ... "assignedBy": "MGI" ... "symbol": "Olfml2a""
- PMID:18757743: "These assays screened the candidate proteins for ECM-assembling activities"