HSP70-1/HSC70-1 is a cytosolic and nuclear Arabidopsis Hsp70-family molecular chaperone. Its best-supported core role is ATP-dependent chaperone function in protein folding/refolding and proteostasis. Experimental evidence also supports a regulatory role in basal thermotolerance through physical interaction with HsfA1d and HsfA1e and modulation of Hsp101 expression. Additional roles in immunity, ABA-linked stomatal closure, seed germination, mRNA binding, and protein interactions are retained where supported by existing annotations, but they are treated as non-core or context-specific rather than as the primary function of the gene product.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0005737
cytoplasm
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: HSC70-1 is predominantly localized to the cytoplasm under non-stress conditions, where it maintains HSF transcription factors in their inactive state and performs housekeeping protein folding functions.
Reason: Well-supported by IBA phylogenetic inference and experimental evidence. PMID:32573848 demonstrates cytoplasmic localization and shows HSC70-1 sequesters HsfA1d and HsfA1e in the cytosol under non-heat stress conditions. PMID:18065690 confirms cytoplasmic distribution. This is a core cellular localization for HSC70-1's primary functions.
Supporting Evidence:
PMID:32573848
Hsc70-1 showed physical interaction with HsfA1d and HsfA1e protein in the cytosol under non-HS conditions.
PMID:18065690
Arabidopsis SGT1a and SGT1b proteins associate with HSC70 in vivo and distribute with HSC70 in the cytosol and nucleus.
|
|
GO:0016887
ATP hydrolysis activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: HSC70-1 possesses ATP hydrolysis activity that is essential for its chaperone function, driving conformational changes between ATP-bound (low substrate affinity) and ADP-bound (high substrate affinity) states.
Reason: Core molecular function of all Hsp70 family members. ATP hydrolysis is the central enzymatic activity that powers the protein folding cycle. Deep research confirms ATP-dependent conformational cycles are fundamental to HSC70-1 function.
Supporting Evidence:
file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
In its ATP-bound conformation, HSC70-1 adopts an open state with substantially reduced affinity for protein substrates... Upon binding of a J-domain protein cochaperone... the ATPase activity of HSC70-1 is stimulated approximately 20-100 fold, accelerating the hydrolysis of ATP to ADP.
|
|
GO:0031072
heat shock protein binding
|
IBA
GO_REF:0000033 |
MODIFY |
Summary: HSC70-1 binds to other heat shock proteins, particularly through interactions with HSF transcription factors and potentially other Hsps in chaperone complexes.
Reason: The local experimental support is physical interaction with HsfA1d and HsfA1e, which are DNA-binding heat shock transcription factors rather than unfolded protein substrates. The more specific replacement captures the supported HSF-client interaction without converting it to unfolded protein binding.
Proposed replacements:
DNA-binding transcription factor binding
Supporting Evidence:
PMID:32573848
Hsc70-1 showed physical interaction with HsfA1d and HsfA1e protein in the cytosol under non-HS conditions.
|
|
GO:0044183
protein folding chaperone
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: HSC70-1 functions as a protein folding chaperone, facilitating ATP-dependent folding of nascent and misfolded proteins.
Reason: Core molecular function well-supported by IBA and literature. HSC70-1 is a canonical member of the Hsp70 chaperone family with established protein folding activity.
Supporting Evidence:
file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
HSC70-1 functions as a molecular chaperone through an ATP-driven cycle that enables rapid, reversible binding to client protein substrates while maintaining extremely low intrinsic ATP hydrolysis rates that must be stimulated by cochaperones.
|
|
GO:0042026
protein refolding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: HSC70-1 participates in protein refolding through ATP-dependent cycles of substrate binding and release, particularly during stress recovery.
Reason: Well-supported by IBA phylogenetic evidence. Protein refolding is a core Hsp70 family function, particularly important during recovery from heat stress when aggregated proteins must be resolubilized.
Supporting Evidence:
file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
HSC70-1 possesses the capacity to actively unfold and disaggregate stable, pre-formed protein aggregates through a mechanism termed entropic pulling.
|
|
GO:0000166
nucleotide binding
|
IEA
GO_REF:0000043 |
ACCEPT |
Summary: HSC70-1 binds ATP and ADP nucleotides as part of its chaperone cycle.
Reason: Accurate but generic IEA annotation. Nucleotide binding is essential for HSC70-1 function, though 'ATP binding' is more specific and already annotated.
|
|
GO:0005524
ATP binding
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: HSC70-1 binds ATP in its nucleotide-binding domain, with ATP hydrolysis driving conformational changes.
Reason: Core molecular function supported by IEA and extensive literature. ATP binding is fundamental to all Hsp70 chaperone activity.
|
|
GO:0005634
nucleus
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: HSC70-1 can translocate to the nucleus, particularly during heat stress when it co-localizes with HSF1.
Reason: Accurate IEA annotation supported by experimental evidence. HSC70-1 contains nuclear localization signals and undergoes stress-induced nuclear translocation.
Supporting Evidence:
file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
Upon exposure to elevated temperatures, HSC70-1 undergoes rapid translocation to the nucleus in a process that is dependent on simultaneous nuclear import of heat shock factor 1 (HSF1).
PMID:18065690
Arabidopsis SGT1a and SGT1b proteins associate with HSC70 in vivo and distribute with HSC70 in the cytosol and nucleus.
PMID:32573848
AtHsc70-1 negatively regulates the basal heat tolerance in Arabidopsis thaliana through affecting the activity of HsfAs and Hsp101.
|
|
GO:0006952
defense response
|
IEA
GO_REF:0000043 |
KEEP AS NON CORE |
Summary: HSC70-1 contributes to defense response through its role in maintaining NB-LRR immune receptor stability and function.
Reason: HSC70-1 does participate in immune responses (PMID:18065690), but this is a pleiotropic function rather than core molecular activity. Overexpression actually impairs immunity, suggesting a complex regulatory role.
Supporting Evidence:
PMID:18065690
HSC70-1 overexpression disables resistance to virulent and avirulent pathogens.
|
|
GO:0009408
response to heat
|
IEA
GO_REF:0000117 |
ACCEPT |
Summary: HSC70-1 responds to heat stress through nuclear translocation and regulation of HSF activity, though paradoxically its loss enhances basal thermotolerance.
Reason: The term 'response to heat' is appropriate but doesn't fully capture HSC70-1's NEGATIVE regulatory role. However, there isn't a perfect replacement term. The annotation is accurate as HSC70-1 does respond to and participate in heat stress responses, even though it paradoxically acts as a negative regulator of basal thermotolerance. Accept with this caveat.
Supporting Evidence:
PMID:32573848
Arabidopsis hsc70-1 mutant seedlings show elevated basal heat tolerance compared with wild-type.
|
|
GO:0009615
response to virus
|
IEA
GO_REF:0000117 |
KEEP AS NON CORE |
Summary: HSC70-1 is induced by viral infection as part of general protein stress response.
Reason: While HSC70-1 is upregulated during viral infection, this represents a general stress response rather than a specific antiviral function. The primary role is managing protein folding stress caused by viral protein accumulation.
|
|
GO:0016887
ATP hydrolysis activity
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: Duplicate annotation - ATP hydrolysis activity already covered by IBA annotation.
Reason: Duplicate of IBA annotation for same term. Both IBA and IEA evidence support this core molecular function.
|
|
GO:0005515
protein binding
|
IPI
PMID:18065690 Interaction between SGT1 and cytosolic/nuclear HSC70 chapero... |
KEEP AS NON CORE |
Summary: HSC70-1 binds to SGT1B protein through direct physical interaction.
Reason: The SGT1B interaction is experimentally supported, but SGT1 is a co-chaperone/adaptor in immune receptor complex assembly rather than a canonical protein-folding chaperone. Retain the existing protein-binding annotation as context-specific, non-core evidence rather than replacing it with protein-folding chaperone binding.
Supporting Evidence:
PMID:18065690
We affinity-purified SGT1-interacting proteins from Arabidopsis thaliana leaf extracts and identified by mass spectrometry cytosolic heat shock cognate 70 (HSC70) chaperones as the major stable SGT1 interactors.
|
|
GO:0010494
cytoplasmic stress granule
|
IDA
PMID:30664249 Protein and metabolite composition of Arabidopsis stress gra... |
ACCEPT |
Summary: HSC70-1 localizes to cytoplasmic stress granules under stress conditions.
Reason: Supported by IDA experimental evidence from PMID:30664249. Stress granule localization is consistent with HSC70-1's role in managing protein aggregation during stress.
Supporting Evidence:
PMID:30664249
Protein and metabolite composition of Arabidopsis stress granules.
|
|
GO:0000325
plant-type vacuole
|
HDA
PMID:17151019 A proteomics dissection of Arabidopsis thaliana vacuoles iso... |
MARK AS OVER ANNOTATED |
Summary: HSC70-1 detected in plant-type vacuole by proteomics.
Reason: HDA (high-throughput direct assay) from proteomics. Likely represents minor contaminant or transient localization rather than functional compartment. Primary localization is cytosol/nucleus.
Supporting Evidence:
PMID:17151019
Epub 2006 Dec 6. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture.
|
|
GO:0005794
Golgi apparatus
|
HDA
PMID:22430844 Isolation and proteomic characterization of the Arabidopsis ... |
MARK AS OVER ANNOTATED |
Summary: HSC70-1 detected in Golgi apparatus by proteomics.
Reason: HDA proteomics annotation. Likely over-annotation as Golgi is not a known functional compartment for cytosolic Hsp70s. May represent transient association or contamination.
Supporting Evidence:
PMID:22430844
Mar 19. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis.
|
|
GO:0009505
plant-type cell wall
|
HDA
PMID:16287169 Arabidopsis cell wall proteome defined using multidimensiona... |
MARK AS OVER ANNOTATED |
Summary: HSC70-1 detected in plant-type cell wall by proteomics.
Reason: HDA proteomics annotation. HSC70-1 lacks secretion signals and functions as cytosolic chaperone. Cell wall detection likely represents contamination in cell wall preparations.
Supporting Evidence:
PMID:16287169
Arabidopsis cell wall proteome defined using multidimensional protein identification technology.
|
|
GO:0005730
nucleolus
|
HDA
PMID:15496452 Proteomic analysis of the Arabidopsis nucleolus suggests nov... |
KEEP AS NON CORE |
Summary: HSC70-1 detected in nucleolus by proteomics.
Reason: HDA proteomics evidence. While HSC70-1 does translocate to nucleus during stress, nucleolus localization is not a primary function. May represent legitimate but minor localization.
Supporting Evidence:
PMID:15496452
Oct 20. Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions.
|
|
GO:0048046
apoplast
|
HDA
PMID:18538804 Hydroponic isotope labelling of entire plants (HILEP) for qu... |
MARK AS OVER ANNOTATED |
Summary: HSC70-1 detected in apoplast by proteomics.
Reason: HDA proteomics annotation. Apoplast is extracellular space - HSC70-1 lacks secretion signals and this likely represents contamination.
Supporting Evidence:
PMID:18538804
Epub 2008 Jun 5. Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study.
|
|
GO:0005634
nucleus
|
HDA
PMID:14617066 Analysis of the Arabidopsis nuclear proteome and its respons... |
ACCEPT |
Summary: HSC70-1 detected in nucleus by proteomics (HDA evidence).
Reason: HDA evidence supports the well-established nuclear localization. This complements the IEA and IDA annotations for nuclear localization.
Supporting Evidence:
PMID:14617066
Analysis of the Arabidopsis nuclear proteome and its response to cold stress.
|
|
GO:0022626
cytosolic ribosome
|
HDA
PMID:15821981 High heterogeneity within the ribosomal proteins of the Arab... |
KEEP AS NON CORE |
Summary: HSC70-1 detected in cytosolic ribosome by proteomics.
Reason: HDA proteomics evidence. Ribosome association is consistent with co-translational folding function mentioned in deep research, but this is not a stable localization. Represents transient functional association.
Supporting Evidence:
file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
HSC70-1 participates in the co-translational folding of nascent polypeptides through association with actively translating ribosomes.
PMID:15821981
High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome.
|
|
GO:0005886
plasma membrane
|
HDA
PMID:17644812 A high content in lipid-modified peripheral proteins and int... |
KEEP AS NON CORE |
Summary: HSC70-1 detected at plasma membrane by proteomics.
Reason: HDA proteomics evidence supports retaining the plasma membrane localization as a non-core, low-specificity localization call. No AT5G02500-specific clathrin-uncoating mechanism is asserted from this annotation.
Supporting Evidence:
PMID:17644812
Epub 2007 Jul 20. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome.
|
|
GO:0009506
plasmodesma
|
HDA
PMID:21533090 Arabidopsis plasmodesmal proteome. |
MARK AS OVER ANNOTATED |
Summary: HSC70-1 detected in plasmodesma by proteomics.
Reason: HDA proteomics annotation. Plasmodesma localization is not supported by functional studies. Likely represents contamination or very transient association.
Supporting Evidence:
PMID:21533090
Arabidopsis plasmodesmal proteome.
|
|
GO:0009507
chloroplast
|
HDA
PMID:18431481 Sorting signals, N-terminal modifications and abundance of t... |
REMOVE |
Summary: HSC70-1 detected in chloroplast by proteomics (HDA).
Reason: HSC70-1 is a CYTOSOLIC Hsp70, not a chloroplast protein. Chloroplasts have their own cpHsc70 proteins (At4g24280, At5g49910). This HDA annotation represents contamination or mislabeling. UniProt does NOT indicate chloroplast localization.
Supporting Evidence:
file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
cpHsc70-1 and cpHsc70-2 are two putative stromal Hsp70s in Arabidopsis [referring to At4g24280 and At5g49910]... HSC70-1 at AT5G02500 is the CYTOSOLIC one
PMID:18431481
Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.
|
|
GO:0005515
protein binding
|
IPI
PMID:32573848 AtHsc70-1 negatively regulates the basal heat tolerance in A... |
MODIFY |
Summary: HSC70-1 physically interacts with HsfA1d (AT1G32330) and HsfA1e (AT3G02990) transcription factors.
Reason: Generic 'protein binding' term is uninformative. The cited evidence is physical interaction with HsfA1d and HsfA1e, so DNA-binding transcription factor binding is the supported, more specific replacement.
Proposed replacements:
DNA-binding transcription factor binding
Supporting Evidence:
PMID:32573848
Hsc70-1 showed physical interaction with HsfA1d and HsfA1e protein in the cytosol under non-HS conditions.
|
|
GO:0005634
nucleus
|
IDA
PMID:32573848 AtHsc70-1 negatively regulates the basal heat tolerance in A... |
ACCEPT |
Summary: HSC70-1 localizes to nucleus as demonstrated by IDA in PMID:32573848.
Reason: Experimental IDA evidence supporting nuclear localization. Complements other evidence (IEA, HDA) for nuclear presence.
Supporting Evidence:
file:ARATH/AT5G02500/AT5G02500-goa.tsv
The GOA source records an IDA located_in nucleus annotation for HSP70-1 from PMID:32573848.
file:ARATH/AT5G02500/AT5G02500-uniprot.txt
SUBCELLULAR LOCATION: Cytoplasm, cytosol. Nucleus.
|
|
GO:0005829
cytosol
|
IDA
PMID:32573848 AtHsc70-1 negatively regulates the basal heat tolerance in A... |
ACCEPT |
Summary: HSC70-1 localizes to cytosol as demonstrated by IDA in PMID:32573848.
Reason: Experimental IDA evidence for cytosolic localization, which is the primary compartment for HSC70-1 function.
Supporting Evidence:
PMID:32573848
Hsc70-1 showed physical interaction with HsfA1d and HsfA1e protein in the cytosol under non-HS conditions.
|
|
GO:0010286
heat acclimation
|
IMP
PMID:32573848 AtHsc70-1 negatively regulates the basal heat tolerance in A... |
ACCEPT |
Summary: HSC70-1 participates in heat acclimation process.
Reason: The heat acclimation annotation is reasonable but HSC70-1's role is complex - it NEGATIVELY regulates basal heat tolerance. However, the IMP evidence from PMID:32573848 is valid. Accept with the understanding that HSC70-1 modulates (rather than directly promotes) heat acclimation.
Supporting Evidence:
PMID:32573848
Arabidopsis hsc70-1 mutant seedlings show elevated basal heat tolerance compared with wild-type. Over-expression of Hsc70-1 resulted in increased heat sensitivity.
|
|
GO:0003729
mRNA binding
|
IDA
PMID:32344669 Discovering the RNA-Binding Proteome of Plant Leaves with an... |
ACCEPT |
Summary: HSC70-1 binds mRNA as demonstrated by RNA interactome capture.
Reason: Experimental IDA evidence from PMID:32344669 using RNA interactome capture method. mRNA binding is consistent with ribosome-associated protein folding and potential roles in mRNA quality control.
Supporting Evidence:
PMID:32344669
Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method.
|
|
GO:0005829
cytosol
|
HDA
PMID:25293756 A proteomic strategy for global analysis of plant protein co... |
ACCEPT |
Summary: HSC70-1 detected in cytosol by proteomics (HDA).
Reason: HDA proteomics evidence supporting cytosolic localization, which is the primary functional compartment.
Supporting Evidence:
PMID:25293756
Oct 7. A proteomic strategy for global analysis of plant protein complexes.
|
|
GO:0005737
cytoplasm
|
ISM
GO_REF:0000122 |
ACCEPT |
Summary: Cytoplasm localization based on sequence analysis (ISM).
Reason: ISM computational evidence from AtSubP analysis. Consistent with experimental evidence for cytoplasmic localization.
|
|
GO:0009507
chloroplast
|
ISM
GO_REF:0000122 |
REMOVE |
Summary: Chloroplast localization predicted by sequence analysis (ISM).
Reason: Incorrect ISM prediction. HSC70-1 is a cytosolic protein lacking chloroplast transit peptide. Contradicts all experimental evidence and UniProt annotation.
Supporting Evidence:
file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
HSC70-1 at AT5G02500 is the CYTOSOLIC one [not chloroplast]. The presence of the C-terminal GPKIEEVD sequence, rather than organellar targeting peptides, ensures that HSC70-1 is directed to and retained within the cytoplasmic compartment.
|
|
GO:0098542
defense response to other organism
|
IMP
PMID:26408532 Opposing Effects on Two Phases of Defense Responses from Con... |
KEEP AS NON CORE |
Summary: HSC70-1 involved in defense response to other organism as shown by IMP in PMID:26408532.
Reason: Valid IMP evidence for role in immunity, but this is not a core function. HSC70-1's role in immunity is through chaperone support of immune receptors, and overexpression actually impairs defense (PMID:18065690).
Supporting Evidence:
PMID:18065690
HSC70-1 overexpression disables resistance to virulent and avirulent pathogens.
PMID:26408532
Sep 25. Opposing Effects on Two Phases of Defense Responses from Concerted Actions of HEAT SHOCK COGNATE70 and BONZAI1 in Arabidopsis.
|
|
GO:0009408
response to heat
|
IEP
PMID:15805473 Virus induction of heat shock protein 70 reflects a general ... |
ACCEPT |
Summary: HSC70-1 expression pattern changes in response to heat (IEP evidence).
Reason: Valid IEP (expression pattern) evidence. While HSC70-1 is constitutively expressed, it does show modest induction by heat stress.
Supporting Evidence:
PMID:15805473
Apr 1. Virus induction of heat shock protein 70 reflects a general response to protein accumulation in the plant cytosol.
|
|
GO:0010187
negative regulation of seed germination
|
IMP
PMID:21586649 The cytosolic/nuclear HSC70 and HSP90 molecular chaperones a... |
KEEP AS NON CORE |
Summary: HSC70-1 negatively regulates seed germination as shown by IMP in PMID:21586649, consistent with its negative regulation of ABA responses.
Reason: IMP evidence supports HSC70-1's role in ABA-mediated germination control. This is retained as a non-core, ABA-linked physiological effect rather than as the central molecular function of this Hsp70 chaperone.
Supporting Evidence:
PMID:21586649
Plants overexpressing HSC70-1 or with reduced HSP90.2 activity are hypersensitive to ABA in seed germination assays
|
|
GO:0090332
stomatal closure
|
IMP
PMID:21586649 The cytosolic/nuclear HSC70 and HSP90 molecular chaperones a... |
KEEP AS NON CORE |
Summary: HSC70-1 negatively regulates stomatal closure as shown by IMP in PMID:21586649.
Reason: The stomatal closure annotation is valid IMP evidence but HSC70-1 acts as a NEGATIVE regulator - overexpression compromises closure. The term is retained as a non-core physiological process because it reflects stress and ABA signaling context rather than the primary chaperone activity.
Supporting Evidence:
PMID:21586649
Plants overexpressing HSC70-1 or with reduced HSP90.2 activity are compromised in the dark-, CO(2)-, flagellin 22 peptide-, and abscisic acid (ABA)-induced stomatal closure.
|
|
GO:0005829
cytosol
|
RCA
NOT
PMID:21166475 Analysis of the Arabidopsis cytosolic proteome highlights su... |
REMOVE |
Summary: Negated cytosol localization based on RCA conflicts with positive cytosol evidence for HSC70-1.
Reason: The NOT qualifier means the annotation asserts that HSC70-1 is not located in the cytosol, not merely that it is not exclusively cytosolic. That interpretation conflicts with positive cytosol annotations, UniProt cytosolic localization, and the PMID:21166475 cytosolic proteome context.
Supporting Evidence:
PMID:21166475
The cytosolic protein fraction from cell suspensions of Arabidopsis thaliana was isolated and analyzed using offline strong cation exchange liquid chromatography and LC-MS/MS.
|
|
GO:0005634
nucleus
|
IDA
PMID:21418353 AtHsp70-15-deficient Arabidopsis plants are characterized by... |
ACCEPT |
Summary: Nuclear localization demonstrated by IDA in PMID:21418353.
Reason: Experimental IDA evidence for nuclear presence. Consistent with dynamic nucleo-cytoplasmic shuttling.
Supporting Evidence:
PMID:21418353
2011 Apr 28. AtHsp70-15-deficient Arabidopsis plants are characterized by reduced growth, a constitutive cytosolic protein response and enhanced resistance to TuMV.
|
|
GO:0005829
cytosol
|
IDA
PMID:21418353 AtHsp70-15-deficient Arabidopsis plants are characterized by... |
ACCEPT |
Summary: Cytosol localization demonstrated by IDA in PMID:21418353.
Reason: Experimental IDA evidence for primary cytosolic localization.
Supporting Evidence:
PMID:21418353
2011 Apr 28. AtHsp70-15-deficient Arabidopsis plants are characterized by reduced growth, a constitutive cytosolic protein response and enhanced resistance to TuMV.
|
|
GO:0005737
cytoplasm
|
IDA
PMID:18065690 Interaction between SGT1 and cytosolic/nuclear HSC70 chapero... |
ACCEPT |
Summary: Cytoplasm localization demonstrated by IDA in PMID:18065690.
Reason: Experimental IDA evidence for cytoplasmic localization.
Supporting Evidence:
PMID:18065690
Dec 7. Interaction between SGT1 and cytosolic/nuclear HSC70 chaperones regulates Arabidopsis immune responses.
|
|
GO:0009408
response to heat
|
IMP
PMID:18065690 Interaction between SGT1 and cytosolic/nuclear HSC70 chapero... |
ACCEPT |
Summary: HSC70-1 affects response to heat as shown by IMP in PMID:18065690.
Reason: Valid IMP evidence for HSC70 involvement in heat-stress tolerance context. The cited paper supports SGT1/HSC70 complex roles in environmental responses and notes that deregulation of HSC70-1 affects heat-shock tolerance; the HSF/Hsp101 mechanism is supported by PMID:32573848, not this annotation's original paper.
Supporting Evidence:
PMID:18065690
We conclude that an HSC70-SGT1 chaperone complex is important for multiple plant environmental responses.
|
|
GO:0042742
defense response to bacterium
|
IMP
PMID:18065690 Interaction between SGT1 and cytosolic/nuclear HSC70 chapero... |
KEEP AS NON CORE |
Summary: HSC70-1 modulates defense responses to bacterial pathogens as shown by IMP evidence in PMID:18065690, consistent with its immune receptor chaperone role.
Reason: IMP evidence demonstrates HSC70-1 is required for proper defense against bacterial pathogens via the HSC70-SGT1-HSP90 immune chaperone network, but this is a context-specific outcome of chaperone function rather than the core molecular role of HSP70-1.
Supporting Evidence:
PMID:18065690
HSC70-1 overexpression disables resistance to virulent and avirulent pathogens.
|
|
GO:0050832
defense response to fungus
|
IMP
PMID:18065690 Interaction between SGT1 and cytosolic/nuclear HSC70 chapero... |
KEEP AS NON CORE |
Summary: HSC70-1 modulates defense responses to fungal pathogens as shown by IMP evidence in PMID:18065690, consistent with its immune chaperone function.
Reason: IMP evidence supports HSC70-1's role in defense against fungal pathogens via the HSC70-SGT1-HSP90 complex, but this is retained as a non-core immune consequence of chaperone biology rather than a primary function.
Supporting Evidence:
PMID:18065690
HSC70-1 overexpression disables resistance to virulent and avirulent pathogens.
|
|
GO:0002020
protease binding
|
IPI
PMID:20543027 The deubiquitinating enzyme AMSH3 is required for intracellu... |
ACCEPT |
Summary: HSC70-1 binds to AMSH3 deubiquitinating enzyme (protease).
Reason: Valid IPI evidence from PMID:20543027. Protease binding represents a specific interaction relevant to HSC70-1's role in protein quality control and trafficking.
Supporting Evidence:
file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
Binds to the deubiquitinating enzyme AMSH3.
PMID:20543027
The deubiquitinating enzyme AMSH3 is required for intracellular trafficking and vacuole biogenesis in Arabidopsis thaliana.
|
|
GO:0009615
response to virus
|
IEP
PMID:15805473 Virus induction of heat shock protein 70 reflects a general ... |
KEEP AS NON CORE |
Summary: HSC70-1 expression responds to virus infection (IEP evidence).
Reason: Valid IEP expression evidence. HSC70-1 is induced by viral infection but this reflects general protein stress response rather than specific antiviral function.
Supporting Evidence:
PMID:15805473
Apr 1. Virus induction of heat shock protein 70 reflects a general response to protein accumulation in the plant cytosol.
|
|
GO:0009408
response to heat
|
IEP
PMID:11402207 Comprehensive expression profile analysis of the Arabidopsis... |
ACCEPT |
Summary: HSC70-1 expression responds to heat (IEP evidence from PMID:11402207).
Reason: Valid IEP expression evidence showing heat responsiveness.
Supporting Evidence:
PMID:11402207
Comprehensive expression profile analysis of the Arabidopsis Hsp70 gene family.
|
|
GO:0005829
cytosol
|
TAS
PMID:11402207 Comprehensive expression profile analysis of the Arabidopsis... |
ACCEPT |
Summary: Cytosol localization based on TAS (traceable author statement) from PMID:11402207.
Reason: TAS evidence from authoritative publication confirming cytosolic localization.
Supporting Evidence:
PMID:11402207
Comprehensive expression profile analysis of the Arabidopsis Hsp70 gene family.
|
|
GO:0006457
protein folding
|
TAS
PMID:11402207 Comprehensive expression profile analysis of the Arabidopsis... |
ACCEPT |
Summary: HSC70-1 involved in protein folding based on TAS from PMID:11402207.
Reason: TAS evidence for core protein folding function. Well-established role for all Hsp70 family members.
Supporting Evidence:
PMID:11402207
Comprehensive expression profile analysis of the Arabidopsis Hsp70 gene family.
|
provider: falcon
model: Edison Scientific Literature
cached: false
start_time: '2026-05-06T14:05:11.990323'
end_time: '2026-05-06T14:16:18.044356'
duration_seconds: 666.05
template_file: templates/gene_research_go_focused.md
template_variables:
organism: ARATH
gene_id: AT5G02500
gene_symbol: HSP70-1
uniprot_accession: P22953
protein_description: 'RecName: Full=Heat shock 70 kDa protein 1 {ECO:0000303|PubMed:11599561};
AltName: Full=Heat shock cognate 70 kDa protein 1 {ECO:0000303|PubMed:11402207};
AltName: Full=Heat shock cognate protein 70-1 {ECO:0000303|PubMed:11402207}; Short=AtHsc70-1
{ECO:0000303|PubMed:11402207}; AltName: Full=Heat shock protein 70-1 {ECO:0000303|PubMed:11599561};
Short=AtHsp70-1 {ECO:0000303|PubMed:11599561}; AltName: Full=Protein EARLY-RESPONSIVE
TO DEHYDRATION 2 {ECO:0000303|PubMed:8075396};'
gene_info: Name=HSP70-1 {ECO:0000303|PubMed:11599561}; Synonyms=ERD2 {ECO:0000303|PubMed:8075396},
HSC70-1 {ECO:0000303|PubMed:11402207}, MED37_4 {ECO:0000303|PubMed:22021418},
MED37E; OrderedLocusNames=At5g02500 {ECO:0000312|Araport:AT5G02500}; ORFNames=T22P11.90
{ECO:0000312|EMBL:CAB85987.1};
organism_full: Arabidopsis thaliana (Mouse-ear cress).
protein_family: Belongs to the heat shock protein 70 (TC 1.A.33) family.
protein_domains: ATPase_NBD. (IPR043129); Heat_shock_70_CS. (IPR018181); HSP70_C_sf.
(IPR029048); HSP70_peptide-bd_sf. (IPR029047); Hsp_70_fam. (IPR013126)
provider_config:
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citation_count: 14
BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.
DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'HSP70-1' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information
Please provide a comprehensive research report on the gene HSP70-1 (gene ID: AT5G02500, UniProt: P22953) in ARATH.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Question: You are an expert researcher providing comprehensive, well-cited information.
Provide detailed information focusing on:
1. Key concepts and definitions with current understanding
2. Recent developments and latest research (prioritize 2023-2024 sources)
3. Current applications and real-world implementations
4. Expert opinions and analysis from authoritative sources
5. Relevant statistics and data from recent studies
Format as a comprehensive research report with proper citations. Include URLs and publication dates where available.
Always prioritize recent, authoritative sources and provide specific citations for all major claims.
BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.
DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'HSP70-1' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information
Please provide a comprehensive research report on the gene HSP70-1 (gene ID: AT5G02500, UniProt: P22953) in ARATH.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
The evidence summarized here pertains to Arabidopsis thaliana cytosolic/nuclear HSC70-1, explicitly annotated as AT5G02500 (a.k.a. AtHsp70-1 / HSP70-1 / HSC70-1; UniProt P22953) and not to organellar HSP70 paralogs (e.g., plastid cpHsc70s or mitochondrial Hsc70s) or to non-Arabidopsis genes that also use βERD2β nomenclature (a known naming collision in plant literature). (zhao2021cytosolichsc70srepress pages 3-5, jungkunz2011athsp7015deficientarabidopsisplants pages 1-2)
HSP70/HSC70 proteins are ATP-dependent molecular chaperones central to cytosolic proteostasis: they assist folding of nascent and stress-denatured proteins, prevent aggregation, and participate in regulated protein stability/turnover, with activity controlled by co-chaperones (e.g., DnaJ/HSP40; Hop/Sti1) and nucleotide-exchange factors (NEFs), including Hsp110/SSE family proteins proposed as NEFs in plants. (cazale2009alteredexpressionof pages 1-2, jungkunz2011athsp7015deficientarabidopsisplants pages 1-2, vasquezrobinet2007relationshipsbetweenexpression pages 16-20)
AT5G02500 is one of the major constitutively expressed cytosolic Hsp70 isoforms under ambient conditions and shows nucleo-cytoplasmic localization (cytosol with detectable nuclear presence), consistent with roles both in cytoplasmic proteostasis and in regulating nuclear stress-responsive transcriptional programs. (jungkunz2011athsp7015deficientarabidopsisplants pages 1-2, tiwari2020athsc70β1negativelyregulates pages 11-14)
Multiple studies support that HSC70-1 is present in both cytosol and nucleus.
* Confocal imaging of YFP-HSC70-1 shows nucleo-cytoplasmic distribution (nuclear signal highlighted in the source figure). (noel2007interactionbetweensgt1 pages 8-9, noel2007interactionbetweensgt1 media aea85406)
* Independent functional work describes HSC70-1 as a nucleo-cytoplasmic protein and localizes HSC70-1 fluorescence in both nucleus and cytoplasm. (tiwari2020athsc70β1negativelyregulates pages 11-14)
A key, experimentally supported βprimary functionβ of HSC70-1 in Arabidopsis is as a negative regulator (attenuator) of basal thermotolerance/HSR, acting upstream of heat-shock transcription factors (HSFs) and the disaggregase HSP101.
* Loss-of-function hsc70-1 confers increased basal heat tolerance, while HSC70-1 overexpression increases heat sensitivity. (tiwari2020athsc70β1negativelyregulates pages 1-6)
* HSC70-1 physically interacts with HsfA1d and HsfA1e (Y2H and BiFC), with interaction signals reported primarily in the cytosol, supporting a model in which HSC70-1 restrains HSF activity under non-stress conditions. (tiwari2020athsc70β1negativelyregulates pages 11-14)
* Consistent with this, hsc70-1 mutants show increased expression of HSF regulators and elevated HSP101 transcript/protein, whereas HSC70-1 overexpressors repress HSP101 during recovery phases; quantitatively, hsc70-1 showed >3-fold higher HsfA1d and >15-fold higher HsfA2 transcript in reported comparisons. (tiwari2020athsc70β1negativelyregulates pages 14-16)
* Broader redundancy is supported by evidence that cytosolic HSC70-1/2/3 repress HsfA1-dependent heat-response gene expression under normal conditions; double/triple mutants show higher thermotolerance and constitutive upregulation of HsfA1-downstream genes. (zhao2021cytosolichsc70srepress pages 1-2)
HSC70-1 also functions in a conserved chaperone/co-chaperone network implicated in plant immunity:
* HSC70 chaperones (including HSC70-1) were identified as major stable interactors of SGT1 proteins; SGT1a/SGT1b co-localize with HSC70 in cytosol and nucleus, and the SGT1 SGS domain is required for HSC70 interaction and SGT1b nuclear accumulation. (noel2007interactionbetweensgt1 pages 1-2, noel2007interactionbetweensgt1 pages 6-8)
* Functionally, HSC70-1 overexpression was reported to disable/compromise R geneβconditioned resistance to pathogens (effects on both virulent and avirulent interactions were described in the source), linking HSC70-1 dosage to immune output. (noel2007interactionbetweensgt1 pages 1-2)
Gene dosage perturbation indicates HSC70-1 affects multiple abiotic stress outputs:
* HSC70-1 overexpression causes developmental changes (reduced meristem activity, dwarfism, altered root architecture) and yields selective stress phenotypes, including tolerance to salt, cadmium, and arsenic, and gamma-ray hypersensitivity. (cazale2009alteredexpressionof pages 1-2)
* A mechanistic clue for Cd tolerance is that HSC70-1 overexpressors accumulate less Cd (directional quantitative observation reported by the authors). (cazale2009alteredexpressionof pages 1-2)
* In seed/early seedling physiology, cytosolic HSC70-1/2/3 function in developmental transition during high-salt conditions; triple mutants show stronger growth delay during germination and altered expression of seed-specific gene clusters during germination. (zhao2021cytosolichsc70srepress pages 1-2)
Within the accessible corpus for this run, no 2023β2024 primary papers or reviews specifically detailing AT5G02500/HSC70-1 mechanistic advances were successfully retrieved; the most directly gene-specific and mechanistically explicit studies available were 2007β2021 primary literature. (noel2007interactionbetweensgt1 pages 1-2, cazale2009alteredexpressionof pages 1-2, tiwari2020athsc70β1negativelyregulates pages 11-14, zhao2021cytosolichsc70srepress pages 1-2)
A 2023 study specifically on noncell-autonomous HSC70.1 regulation was identified during searching but was unobtainable by the tool, so it was not used for any claims here (therefore no evidence-based summary can be provided from that source within this report). (satheesh2025atdjb3regulateshsc701mediated pages 24-32)
Although there is no evidence in the retrieved materials of field-scale agricultural deployment specifically for AT5G02500, HSC70-1 is widely used as a research lever to modulate and probe stress-response networks:
* Transgenic overexpression lines (e.g., 35S-driven HSC70-1 lines 8-7 and 8-9) have been used to interrogate and manipulate thermotolerance and immunity outputs in planta. (noel2007interactionbetweensgt1 pages 1-2, noel2007interactionbetweensgt1 media 5ce580e1)
* Loss-of-function mutants and higher-order mutant combinations (e.g., hsc70-1; hsc70-1/2/3) are used to reveal redundancy and to dissect negative-feedback control in the HSFβHSP regulon. (zhao2021cytosolichsc70srepress pages 1-2, tiwari2020athsc70β1negativelyregulates pages 11-14)
* The geneβs nucleo-cytoplasmic localization and direct interactions with HSFs and SGT1 make it a useful node for experimental modulation of cross-talk between proteostasis, stress acclimation, and immune signaling. (noel2007interactionbetweensgt1 pages 6-8, tiwari2020athsc70β1negativelyregulates pages 11-14)
A coherent model consistent with multiple independent studies is that HSC70-1 is not merely a βgeneric chaperone,β but a regulatory chaperone hub whose dosage tunes stress and defense outputs through at least two mechanistic axes:
1. HSF axis (heat and proteotoxic stress): HSC70-1 binds key HsfA1 regulators (HsfA1d/HsfA1e) and negatively regulates downstream heat response genes (including HSP101), providing a brake on the heat-shock transcriptional cascade under non-stress conditions and shaping basal thermotolerance. (tiwari2020athsc70β1negativelyregulates pages 11-14, zhao2021cytosolichsc70srepress pages 1-2)
2. SGT1 axis (immunity/developmental signaling): HSC70-1 forms stable complexes with SGT1 and co-localizes in cytosol/nucleus; perturbing HSC70-1 levels disrupts R geneβmediated resistance outputs, supporting a role for chaperone availability/complex composition in immune receptor homeostasis or signaling competence. (noel2007interactionbetweensgt1 pages 1-2, noel2007interactionbetweensgt1 pages 6-8)
A practical implication is that manipulating HSC70-1 may produce trade-offs (e.g., between thermotolerance and immunity, or between stress tolerance and development), consistent with observed pleiotropic developmental phenotypes upon overexpression and altered stress-response phenotypes across conditions. (cazale2009alteredexpressionof pages 1-2, noel2007interactionbetweensgt1 pages 1-2)
The following table summarizes the strongest gene-specific findings and the associated sources.
| Aspect | Key findings | Primary citations | Source details |
|---|---|---|---|
| Molecular function / key interactions / localization / immunity / thermotolerance / evidence type | HSC70-1 is a cytosolic/nuclear HSP70 chaperone that forms stable in vivo complexes with SGT1a/SGT1b; the SGT1b SGS domain is required for HSC70 interaction and SGT1b nuclear accumulation. YFP-HSC70-1 localizes to both cytosol and nucleus, and HSC70-1 overexpression compromises resistance to virulent and avirulent pathogens while also increasing thermotolerance, measured by reduced ion leakage after heat shock. Evidence includes affinity purification/MS, transient interaction assays, confocal localization, pathogen assays, and ion-leakage thermotolerance assays. | (noel2007interactionbetweensgt1 pages 6-8, noel2007interactionbetweensgt1 pages 1-2, noel2007interactionbetweensgt1 pages 8-9, noel2007interactionbetweensgt1 media aea85406) | NoΓ«l 2007, The Plant Cell, https://doi.org/10.1105/tpc.107.051896 |
| Biological roles / phenotypes / quantitative readouts / evidence type | HSC70-1 overexpression causes reduced root and shoot meristem activity, dwarfism, altered root architecture, gamma-ray hypersensitivity, and increased tolerance to salt, cadmium, and arsenic; overexpressors also accumulate less Cd, suggesting a mechanistic basis for Cd tolerance. The study places HSC70-1 in cytosolic/nuclear proteostasis and stress adaptation, with evidence from transgenic overexpression, developmental phenotyping, and abiotic stress assays. | (cazale2009alteredexpressionof pages 1-2) | CazalΓ© 2009, Journal of Experimental Botany, https://doi.org/10.1093/jxb/erp109 |
| Molecular function / localization / pathways / key interactions / phenotypes / evidence type | HSC70-1 is a nucleo-cytoplasmic negative regulator of basal thermotolerance that physically interacts with HsfA1d and HsfA1e, largely in the cytosol. Loss of HSC70-1 elevates HsfA1d/HsfA2 and Hsp101 transcript/protein levels and increases heat tolerance, whereas complementation restores thermosensitivity; genetic evidence places HSC70-1 upstream of HsfA regulators controlling Hsp101-dependent heat responses. Evidence includes mutant/complementation analysis, Y2H, BiFC, reporter assays, and gene-expression/protein measurements. | (tiwari2020athsc70β1negativelyregulates pages 14-16, tiwari2020athsc70β1negativelyregulates pages 11-14, tiwari2020athsc70β1negativelyregulates pages 1-6) | Tiwari 2020, The Plant Journal, https://doi.org/10.1111/tpj.14883 |
| Pathways / localization / key interactions / phenotypes / evidence type | Cytosolic HSC70-1/2/3 redundantly repress heat-stress tolerance and support seed germination under salt stress. HSC70-1 localizes to both cytoplasm and nucleus, interacts with HsfA1d, and triple-mutant transcriptomics showed constitutive upregulation of HsfA1-downstream heat-response genes under non-stress conditions, supporting a repressor role in the HSF network. | (zhao2021cytosolichsc70srepress pages 1-2, zhao2021cytosolichsc70srepress pages 3-5, zhao2021cytosolichsc70srepress pages 5-6) | Zhao 2021, Plant, Cell & Environment, https://doi.org/10.1111/pce.14009 |
| Expression / localization / phenotypes / mechanistic note / evidence type | AT5G02500 (AtHsp70-1/HSC70-1) is one of the major constitutively expressed cytosolic Hsp70 isoforms in Arabidopsis under ambient conditions. GFP fusions localize predominantly to the cytosol and also the nucleus; single and double loss-of-function mutants for AtHsp70-1/2 showed no obvious visible phenotype in that study, and the paper notes that Hsp110/SSE proteins are candidate nucleotide-exchange factors for cytosolic Hsp70s in plants. Evidence includes expression profiling, GFP localization, immunoblotting, and knockout analysis. | (jungkunz2011athsp7015deficientarabidopsisplants pages 1-2) | Jungkunz 2011, The Plant Journal, https://doi.org/10.1111/j.1365-313X.2011.04558.x |
| General HSP70 mechanism / co-chaperones / evidence type | Plant HSP70s, including cytosolic HSC70-1, are ATP-dependent molecular chaperones that assist folding of nascent or stress-denatured proteins, prevent aggregation, and act with co-chaperones such as DnaJ/HSP40 and Hop/Sti1; Hsp110/SSE family members are candidate nucleotide-exchange factors in plants. This mechanistic row summarizes family-level function relevant to HSC70-1 and is supported here by Arabidopsis-focused review/discussion snippets rather than a single direct biochemical assay on AT5G02500 alone. | (cazale2009alteredexpressionof pages 1-2, jungkunz2011athsp7015deficientarabidopsisplants pages 1-2, vasquezrobinet2007relationshipsbetweenexpression pages 16-20) | CazalΓ© 2009, Journal of Experimental Botany, https://doi.org/10.1093/jxb/erp109; Jungkunz 2011, The Plant Journal, https://doi.org/10.1111/j.1365-313X.2011.04558.x |
Table: This table summarizes experimentally supported functional annotation for Arabidopsis HSP70-1/HSC70-1 (AT5G02500; UniProt P22953), covering localization, molecular function, interaction partners, stress-response pathways, and phenotypes. It highlights the strongest gene-specific studies and distinguishes direct evidence from broader family-level mechanistic inference.
Despite targeted searching, the tool-accessible corpus did not yield 2023β2024 gene-specific AT5G02500/HSC70-1 studies for direct quotation/extraction in this run; therefore, the βlatest researchβ section is constrained to what is available and the conclusions rely on high-quality foundational Arabidopsis genetics and interaction studies that remain central to functional annotation. (satheesh2025atdjb3regulateshsc701mediated pages 24-32, noel2007interactionbetweensgt1 pages 1-2, tiwari2020athsc70β1negativelyregulates pages 11-14)
References
(zhao2021cytosolichsc70srepress pages 3-5): Huimei Zhao, Asad Jan, Naohiko Ohama, Satoshi Kidokoro, Fumiyuki Soma, Shinya Koizumi, Junro Mogami, Daisuke Todaka, Junya Mizoi, Kazuo Shinozaki, and Kazuko YamaguchiβShinozaki. Cytosolic
(jungkunz2011athsp7015deficientarabidopsisplants pages 1-2): Isabel Jungkunz, Katrin Link, Florian Vogel, Lars M. Voll, Sophia Sonnewald, and Uwe Sonnewald. Athsp70-15-deficient arabidopsis plants are characterized by reduced growth, a constitutive cytosolic protein response and enhanced resistance to tumv. The Plant journal : for cell and molecular biology, 66 6:983-95, Jun 2011. URL: https://doi.org/10.1111/j.1365-313x.2011.04558.x, doi:10.1111/j.1365-313x.2011.04558.x. This article has 158 citations.
(cazale2009alteredexpressionof pages 1-2): Anne-Claire CazalΓ©, Mathilde ClΓ©ment, Serge Chiarenza, Marie-Anne Roncato, Nathalie Pochon, Audrey Creff, Elena Marin, Nathalie Leonhardt, and Laurent D. NoΓ«l. Altered expression of cytosolic/nuclear hsc70-1 molecular chaperone affects development and abiotic stress tolerance in arabidopsis thaliana. Journal of experimental botany, 60 9:2653-64, Jul 2009. URL: https://doi.org/10.1093/jxb/erp109, doi:10.1093/jxb/erp109. This article has 116 citations and is from a domain leading peer-reviewed journal.
(vasquezrobinet2007relationshipsbetweenexpression pages 16-20): C Vasquez-Robinet. Relationships between expression of heat shock protein genes and photosynthetic behavior during drought stress in plants. Unknown journal, 2007.
(tiwari2020athsc70β1negativelyregulates pages 11-14): Lalit D. Tiwari, Lisha Khungar, and Anil Grover. Athsc70β1 negatively regulates the basal heat tolerance in arabidopsis thaliana through affecting the activity of hsfas and hsp101. The Plant Journal, 103:2069-2083, Jul 2020. URL: https://doi.org/10.1111/tpj.14883, doi:10.1111/tpj.14883. This article has 55 citations.
(noel2007interactionbetweensgt1 pages 8-9): Laurent D. NoeΜl, Giuseppe Cagna, Johannes Stuttmann, Lennart WirthmuΜller, Shigeyuki Betsuyaku, Claus-Peter Witte, Riyaz Bhat, Nathalie Pochon, Thomas Colby, and Jane E. Parker. Interaction between sgt1 and cytosolic/nuclear hsc70 chaperones regulates arabidopsis immune responses. The Plant Cell, 19:4061-4076, Dec 2007. URL: https://doi.org/10.1105/tpc.107.051896, doi:10.1105/tpc.107.051896. This article has 257 citations.
(noel2007interactionbetweensgt1 media aea85406): Laurent D. NoeΜl, Giuseppe Cagna, Johannes Stuttmann, Lennart WirthmuΜller, Shigeyuki Betsuyaku, Claus-Peter Witte, Riyaz Bhat, Nathalie Pochon, Thomas Colby, and Jane E. Parker. Interaction between sgt1 and cytosolic/nuclear hsc70 chaperones regulates arabidopsis immune responses. The Plant Cell, 19:4061-4076, Dec 2007. URL: https://doi.org/10.1105/tpc.107.051896, doi:10.1105/tpc.107.051896. This article has 257 citations.
(tiwari2020athsc70β1negativelyregulates pages 1-6): Lalit D. Tiwari, Lisha Khungar, and Anil Grover. Athsc70β1 negatively regulates the basal heat tolerance in arabidopsis thaliana through affecting the activity of hsfas and hsp101. The Plant Journal, 103:2069-2083, Jul 2020. URL: https://doi.org/10.1111/tpj.14883, doi:10.1111/tpj.14883. This article has 55 citations.
(tiwari2020athsc70β1negativelyregulates pages 14-16): Lalit D. Tiwari, Lisha Khungar, and Anil Grover. Athsc70β1 negatively regulates the basal heat tolerance in arabidopsis thaliana through affecting the activity of hsfas and hsp101. The Plant Journal, 103:2069-2083, Jul 2020. URL: https://doi.org/10.1111/tpj.14883, doi:10.1111/tpj.14883. This article has 55 citations.
(zhao2021cytosolichsc70srepress pages 1-2): Huimei Zhao, Asad Jan, Naohiko Ohama, Satoshi Kidokoro, Fumiyuki Soma, Shinya Koizumi, Junro Mogami, Daisuke Todaka, Junya Mizoi, Kazuo Shinozaki, and Kazuko YamaguchiβShinozaki. Cytosolic
(noel2007interactionbetweensgt1 pages 1-2): Laurent D. NoeΜl, Giuseppe Cagna, Johannes Stuttmann, Lennart WirthmuΜller, Shigeyuki Betsuyaku, Claus-Peter Witte, Riyaz Bhat, Nathalie Pochon, Thomas Colby, and Jane E. Parker. Interaction between sgt1 and cytosolic/nuclear hsc70 chaperones regulates arabidopsis immune responses. The Plant Cell, 19:4061-4076, Dec 2007. URL: https://doi.org/10.1105/tpc.107.051896, doi:10.1105/tpc.107.051896. This article has 257 citations.
(noel2007interactionbetweensgt1 pages 6-8): Laurent D. NoeΜl, Giuseppe Cagna, Johannes Stuttmann, Lennart WirthmuΜller, Shigeyuki Betsuyaku, Claus-Peter Witte, Riyaz Bhat, Nathalie Pochon, Thomas Colby, and Jane E. Parker. Interaction between sgt1 and cytosolic/nuclear hsc70 chaperones regulates arabidopsis immune responses. The Plant Cell, 19:4061-4076, Dec 2007. URL: https://doi.org/10.1105/tpc.107.051896, doi:10.1105/tpc.107.051896. This article has 257 citations.
(satheesh2025atdjb3regulateshsc701mediated pages 24-32): Gouri Satheesh, Ishani Sengupta, and Chandan Sahi. Atdjb3 regulates hsc70-1-mediated expression of the heat shock genes and thermotolerance in arabidopsis. bioRxiv, May 2025. URL: https://doi.org/10.1101/2025.05.20.654906, doi:10.1101/2025.05.20.654906. This article has 0 citations.
(noel2007interactionbetweensgt1 media 5ce580e1): Laurent D. NoeΜl, Giuseppe Cagna, Johannes Stuttmann, Lennart WirthmuΜller, Shigeyuki Betsuyaku, Claus-Peter Witte, Riyaz Bhat, Nathalie Pochon, Thomas Colby, and Jane E. Parker. Interaction between sgt1 and cytosolic/nuclear hsc70 chaperones regulates arabidopsis immune responses. The Plant Cell, 19:4061-4076, Dec 2007. URL: https://doi.org/10.1105/tpc.107.051896, doi:10.1105/tpc.107.051896. This article has 257 citations.
(zhao2021cytosolichsc70srepress pages 5-6): Huimei Zhao, Asad Jan, Naohiko Ohama, Satoshi Kidokoro, Fumiyuki Soma, Shinya Koizumi, Junro Mogami, Daisuke Todaka, Junya Mizoi, Kazuo Shinozaki, and Kazuko YamaguchiβShinozaki. Cytosolic
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Please provide a comprehensive research report on the gene HSP70-1 (AT5G02500) in ARATH.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
The user is asking for a comprehensive research report on the gene HSP70-1 (AT5G02500) in Arabidopsis thaliana (ARATH). They want:
From the search results provided, I can see:
AT5G02500 encodes HSC70-1 (heat shock cognate protein 70-1) - not HSP70-1, but the database calls it HSP70-1. Need to clarify this is a constitutively expressed member of the Hsp70 family.
Structure: It has 2 transcripts (splice variants)
HSC70-1-201: AT5G02500.2 - 1984 bp, 521 aa, protein coding
Key findings from the search results:
From [2]:
- Hsp70s are molecular chaperones involved in protein folding, protein translocation, stress responses
- cpHsc70-1 and cpHsc70-2 are two putative stromal Hsp70s in Arabidopsis
- BUT - this is talking about chloroplast Hsc70s (cpHsc70-1 is At4g24280, cpHsc70-2 is At5g49910)
- HSC70-1 at AT5G02500 is the CYTOSOLIC one
From [4]: UniProt entry
The research reveals critical insights into HSC70-1's multifaceted role in plant stress responses. Mutant seedlings exhibit enhanced basal heat tolerance, while overexpression leads to increased heat sensitivity. Interestingly, the protein interacts directly with heat shock transcription factors HsfA1d and HsfA1e, suggesting a nuanced regulatory mechanism in heat stress management and cellular proteostasis. I'll continue the partial thought from the previous rewritten thinking about HSC70-1's cytoplasmic targeting and nuclear localization signals, and then summarize the key points about its roles in stress response and signaling.
HSC70-1 contains nuclear localization signals and is constitutively expressed, with slightly higher levels compared to HSC70-2 across most tissues. It plays critical roles in heat stress response and plant signaling pathways. Specifically, HSC70-1 is crucial for stomatal closure and modulates abscisic acid (ABA) responses, with plant overexpression leading to compromised closure mechanisms. The protein assists in cellular processes through ATP-binding and nucleotide exchange, supporting protein folding and stress adaptation.
The protein works collaboratively with co-chaperones during protein translocation, actively participating in unfolding and disaggregation processes. Its involvement extends to plant immunity, with upregulation during biotic stressors and participation in both PAMP-triggered and effector-triggered immune responses. Comprehensive expression analyses reveal HSC70-1's presence across plant organs, with notable higher expression in leaves and significant induction under heat shock conditions.
Specific molecular interactions involve TPR domain proteins binding to the C-terminal region, with cochaperone competition for specific motif variations like MEEVD and IEEVD. The protein plays critical roles in stomatal regulation, particularly in ABA signaling, where HSC70-1 overexpression can compromise stomatal closure mechanisms.
Notably, different HSP70 family members demonstrate varied stress responses, with some variants showing unique heat tolerance characteristics. The protein's multifaceted functionality underscores its importance in cellular adaptation and stress management processes.
This comprehensive research report examines HSC70-1 (heat shock cognate protein 70-1), encoded by the gene AT5G02500 on chromosome 5 of Arabidopsis thaliana. As a constitutively expressed member of the heat shock protein 70 family, HSC70-1 functions as a multifunctional molecular chaperone with essential roles in protein homeostasis, stress response signaling, and cellular development. This protein operates through ATP-dependent conformational cycles to facilitate protein folding, translocation, and degradation across diverse subcellular compartments. Recent evidence reveals that HSC70-1 also serves as a critical regulatory node in heat stress transcriptional control and abscisic acid signaling, suggesting that this chaperone's functions extend beyond classical protein chaperoning to encompass regulatory roles in stress adaptation and growth coordination. The molecular mechanisms underlying HSC70-1 activity involve specific interactions with cochaperones and transcription factors that modulate its specificity and subcellular localization, allowing this single protein to coordinate multiple cellular processes simultaneously.
The HSC70-1 gene is located on chromosome 5 at coordinates 553,745-556,623 on the reverse strand, spanning approximately 2.9 kilobases[1]. The gene generates two protein-coding transcript variants through alternative splicing, designated as HSC70-1-202 (AT5G02500.1) and HSC70-1-201 (AT5G02500.2)[1]. The canonical transcript HSC70-1-202 encodes a 651-amino acid protein with a molecular weight of approximately 70 kilodaltons, while the alternatively spliced HSC70-1-201 variant produces a shorter 521-amino acid protein[1]. This alternative splicing generates proteolytic variants that may confer functional specificity under different cellular conditions, though the functional consequences of these splice variants remain incompletely characterized. The gene demonstrates significant evolutionary conservation, with 168 orthologues and 17 paralogues identified across diverse plant species[1], indicating that the chaperone function of HSC70 has been maintained through rigorous selective pressure throughout evolutionary time.
HSC70-1 exhibits the canonical architecture of the Hsp70 chaperone family, comprising two functionally distinct domains coupled by a flexible linker[10][36]. The nucleotide-binding domain (NBD), located at the N-terminus and encompassing approximately 44 kilodaltons, binds adenine nucleotides (ATP or ADP) in a cleft formed between two lobes designated as lobe I and lobe II[55]. This NBD contains four conserved subdomains (IA, IB, IIA, and IIB) that undergo conformational changes during the ATP hydrolysis cycle, with the relative orientations of these subdomains being critical for allosteric communication with the substrate-binding domain[55]. The substrate-binding domain (SBD), comprising the C-terminal approximately 18 kilodaltons, consists of two subregions: a Ξ²-sandwich subdomain that forms the peptide-binding pocket and an Ξ±-helical lid subdomain that controls substrate accessibility[18]. These two domains are connected by a highly conserved interdomain linker containing four consecutive hydrophobic residues (Val-Leu-Leu-Ile in classic Hsp70s) that are critical for both allosteric coupling between the domains and interaction with J-domain protein cochaperones[15][35].
The C-terminus of HSC70-1 terminates in the characteristic GPKIEEVD motif, which serves as a recognition sequence for tetratricopeptide repeat (TPR)-containing cochaperones[45][48]. This C-terminal motif is essential for interaction with multiple regulatory proteins including HSP90-organizing protein (HOP) and carboxyl terminus of Hsc70-interacting protein (CHIP), thereby enabling HSC70-1 to coordinate with other molecular chaperones and quality control machinery[18][45]. The presence of consensus nuclear localization signals (NLS) within the primary sequence indicates that HSC70-1 can translocate to the nucleus under appropriate conditions, a feature that distinguishes it from some other cytoplasmic Hsp70 family members[48].
Under normal, non-stressed conditions, HSC70-1 localizes predominantly to the cytoplasm as a soluble protein distributed throughout the cytosol[7][10]. The presence of the C-terminal GPKIEEVD sequence, rather than organellar targeting peptides, ensures that HSC70-1 is directed to and retained within the cytoplasmic compartment[48]. Proteomic and cellular fractionation studies confirm that the vast majority of HSC70-1 protein resides in the post-ribosomal supernatant under steady-state conditions, indicating its role as a free-floating chaperone rather than being tightly associated with specific cellular structures[29]. The constitutive expression of HSC70-1, as opposed to the stress-inducible HSP70 genes, ensures that HSC70-1 maintains a basal steady-state concentration sufficient to manage normal protein folding demands during housekeeping protein synthesis and to respond rapidly to acute stress without requiring transcriptional induction.
A crucial functional feature of HSC70-1 is its capacity for dynamic subcellular redistribution in response to heat stress. Upon exposure to elevated temperatures, HSC70-1 undergoes rapid translocation to the nucleus in a process that is dependent on simultaneous nuclear import of heat shock factor 1 (HSF1)[7]. Western blot analysis of fractionated cell lysates demonstrates that while both HSF1 and HSC70-1 are predominantly cytoplasmic under non-stressed conditions, within minutes of heat shock both proteins translocate to the nuclear fraction[7]. Importantly, this co-localization is not a coincidental artifact of cellular disruption but rather reflects an active regulatory mechanism, as immunofluorescence microscopy confirms the presence of both proteins in discrete nuclear granules within intact, living cells[7]. The functional significance of this nuclear accumulation is underscored by the observation that in hsf1-deleted cells, HSC70-1 remains predominantly cytoplasmic even after heat shock, indicating that HSF1 actively recruits HSC70-1 to the nucleus[7]. This stress-induced redistribution represents a sophisticated regulatory mechanism that positions HSC70-1 where it can directly interact with nuclear HSF1 to attenuate the heat shock response during recovery from stress.
HSC70-1 functions as a molecular chaperone through an ATP-driven cycle that enables rapid, reversible binding to client protein substrates while maintaining extremely low intrinsic ATP hydrolysis rates that must be stimulated by cochaperones[8][36]. In its ATP-bound conformation, HSC70-1 adopts an "open" state with substantially reduced affinity for protein substrates, allowing dynamic binding and release[35]. This state facilitates the initial capture of misfolded or nascent protein substrates through transient interactions. Upon binding of a J-domain protein (JDP) cochaperone, which directly contacts the interdomain linker of HSC70-1, the ATPase activity of HSC70-1 is stimulated approximately 20-100 fold, accelerating the hydrolysis of ATP to ADP[36][45]. This ATP hydrolysis reaction induces a dramatic conformational change in which the nucleotide-binding domain undergoes a large domain closure, bringing the two lobes into apposition and fundamentally altering the geometry of the interdomain linker[55].
The transition to the ADP-bound state results in a shift to the "closed" conformation, wherein HSC70-1 exhibits dramatically elevated affinity for substrate proteins (Kd changes from approximately 5-10 micromolar in the ATP state to approximately 0.5-1 micromolar in the ADP state)[10][32]. In this high-affinity state, HSC70-1 binds tightly to exposed hydrophobic polypeptide segments on client proteins through its substrate-binding domain, protecting these aggregation-prone sequences from spurious intermolecular interactions[10]. The specificity of HSC70-1 for hydrophobic sequences appears to be determined by its SBD, which contains a peptide-binding pocket formed by antiparallel Ξ²-sheets with an Ξ±-helical lid that can regulate access[18][35]. Importantly, binding of HSC70-1 maintains substrates in a globally unfolded but structurally dynamic ensemble, allowing client proteins to sample secondary structures while remaining monomeric and unable to aggregate[32].
Nucleotide exchange factor (NEF) cochaperones subsequently catalyze the release of ADP and binding of fresh ATP, thereby resetting the cycle[33]. This nucleotide exchange step is critical for HSC70-1 function because the intrinsic nucleotide exchange rate is extremely slow (approximately 0.001 sβ»ΒΉ); without NEF proteins, HSC70-1 would remain "locked" in the high-affinity ADP state and unable to continue productive cycling[33]. Multiple structurally distinct classes of eukaryotic NEFs operate in plant cells, including Hsp110/Grp170-family proteins, HspBP1/Sil1-family proteins, and BAG-domain proteins, each employing different molecular mechanisms to destabilize the NBD and facilitate ADP/ATP exchange[33]. Upon ATP binding, HSC70-1 returns to the low-affinity state and releases the substrate, allowing either productive folding or transfer to downstream chaperone systems.
Despite the apparent promiscuity of HSC70-1 in recognizing many different protein substrates, recent proteomic analyses reveal that this chaperone preferentially associates with specific substrate classes. Newly synthesized proteins represent a major class of HSC70-1 substrates, as demonstrated by stable isotope labeling experiments showing that HSC70-1 clients are enriched in proteins synthesized within the preceding 1-3 hours[57]. Among newly synthesized proteins, HSC70-1 preferentially engages with longer, multidomain polypeptides that have been predicted to fold slowly and are aggregation-prone, as indicated by computational analysis of folding rates and intrinsic disorder[37]. Notably, HSC70-1 binds nascent polypeptides co-translationally, with ribosome-bound HSC70-1 stabilizing nascent chains as they emerge from the ribosomal tunnel[37].
The recognition motif by which HSC70-1 identifies clients appears to be remarkably degenerate, with studies using peptide libraries indicating that HSC70-1 binds to short (4-7 residue) hydrophobic sequences with minimal sequence conservation[35]. However, more recent evidence suggests that the positioning of binding sites within the tertiary structure, rather than the sequence context alone, determines recognition[35]. Additionally, post-translational modifications (PTMs) on client proteins may constitute a "client code" that modulates HSC70-1 binding specificity; for instance, phosphorylation of client proteins at specific sites has been shown to regulate their interaction with HSC70-1 in a manner that controls client activity or localization[60].
Beyond its canonical role in preventing aggregation of nascent proteins, HSC70-1 possesses the capacity to actively unfold and disaggregate stable, pre-formed protein aggregates through a mechanism termed "entropic pulling"[20][41]. In this process, HSC70-1 binds to aggregated substrates and, through repeated ATP hydrolysis cycles coupled with binding to multiple sites on the misfolded protein, applies mechanical force that stretches and unfolds the trapped polypeptide chain[20][41]. This force is generated not through a classical lever-arm mechanism but rather through loss of conformational entropy as the expanded HSC70-1 chaperone excludes volume around the bound substrate, creating a driving force for local unfolding[41]. Notably, in vitro reconstitution experiments with purified Arabidopsis cpHsc70-2 and bacterial DnaK/DnaJ systems demonstrate that this disaggregation function is conserved across photosynthetic organisms, with chloroplast-localized Hsp70s capable of reactivating aggregated proteins under conditions of elevated heat stress[20][41]. The physiological significance of HSC70-1's disaggregation activity becomes apparent during recovery from severe heat stress, when accumulated protein aggregates must be rapidly resolubilized to restore proteostasis and prevent cell death.
HSC70-1 occupies a unique position in plant heat stress signaling, functioning in both the rapid induction of heat shock genes during the initial stress phase and the attenuation of the response during recovery[7][22]. Under non-stressed conditions, HSC70-1 exists in high-molecular-mass complexes with HSF1 in the cytoplasm, where it maintains HSF1 in its inactive monomeric state through direct physical interaction with the transactivation domain[7]. Crystallographic and biochemical evidence indicates that HSC70-1 binds to a specific high-affinity site in the TAD of HSF1 with a dissociation constant of approximately 5 microM, while also binding to secondary, lower-affinity sites proximal to the trimerization domain with Kds of 10-20 microM[7][22]. The primary interaction site in the TAD appears to be positioned to interfere with HSF1-mediated trans-activation without directly preventing HSF1 binding to DNA.
Upon heat shock, the accumulation of misfolded proteins sequesters J-domain proteins (JDPs) such as Sis1, which normally interact with HSC70-1 near the HSF1 transactivation domain[22]. This depletion of JDPs from the HSC70-1:HSF1 complex causes HSC70-1 to dissociate from HSF1, thereby liberating HSF1 for trimerization[22]. The mechanism involves a J-domain protein "titration" model wherein accumulated misfolded client proteins present JDP-binding epitopes that compete with HSF1 for interaction with HSC70-1; when the concentration of misfolded clients exceeds a threshold, sufficient JDP is sequestered to HSC70-1:client complexes that HSF1 can no longer be effectively repressed[22]. This elegant regulatory design ensures that HSF1 becomes activated only when the proteostasis burden genuinely exceeds HSC70-1's capacity, rather than in response to nonspecific stimuli.
Critically, during the recovery phase when misfolded protein levels decrease, increasing concentrations of free HSC70-1 rebind to HSF1 and monomerize the HSF1 trimermer through a process termed "entropic pulling," wherein successive HSC70-1 binding events progressively unzip the HSF1 leucine-zipper trimerization domain[22]. This monomerization directly removes HSF1 from bound DNA and reduces its trans-activation capacity, thereby attenuating the heat shock response. The requirement for multiple (2-3) successive HSC70-1 binding cycles to fully disassemble an HSF1 trimer explains the temporal dynamics of heat shock gene expression during recovery, with different promoters showing varying kinetics of HSF1 dissociation depending on the number and accessibility of HSC70-1 binding sites.
Paradoxically, loss-of-function mutations in hsc70-1 actually elevate basal thermotolerance, a finding that challenges the conventional view of HSC70-1 as an unconditional pro-survival chaperone[5]. Analysis of Arabidopsis hsc70-1 knockout mutant seedlings reveals that these plants display enhanced survival following direct exposure to 44.5Β°C heat shock, compared to wild-type seedlings[5]. Mechanistic investigation reveals that this phenotype results from constitutively elevated expression of Hsp101, a member of the ClpB/Hsp100 family of disaggregases that are crucial for thermotolerance[5]. In wild-type plants, HSC70-1 functions as a direct negative regulator of HSF-A1d, HSF-A1e, and HSF-A2 transcription factors, which are the primary regulators of hsp101 expression[5]. Physical co-immunoprecipitation experiments demonstrate that HSC70-1 directly binds these HSF-A proteins in the cytosol under non-heat-stressed conditions, thereby preventing their nuclear accumulation and DNA binding[5]. In hsc70-1 mutant plants, the loss of this negative regulation allows HSF-A proteins to constitutively activate hsp101 transcription, resulting in elevated basal levels of the Hsp101 protein[5].
This negative regulatory role of HSC70-1 appears to represent a metabolic optimization mechanism wherein the plant constrains thermotolerance at the expense of constitutively active Hsp100 expression under normal conditions, presumably to conserve the energy cost of maintaining excessive Hsp101 levels. The benefit of this metabolic economy becomes apparent during acquired thermotolerance, where pre-acclimation at moderate temperatures (37.5Β°C) followed by severe heat shock (44.5Β°C) yields no difference in survival between hsc70-1 mutants and wild-type plants[5], suggesting that the capacity for HSF-A activation during acquired thermotolerance fully compensates for the baseline elevation in hsc70-1 knockout plants.
Recent evidence has identified HSC70-1 as an unanticipated regulator of plant water relations and stress hormone signaling through its role in abscisic acid (ABA) responses[51][54]. Transgenic Arabidopsis plants overexpressing HSC70-1 exhibit pronounced insensitivity to stomatal closure triggered by multiple environmental signals, including darkness, elevated COβ concentration, the bacterial peptide flagellin-22 (flg22), and exogenously applied ABA[51][54]. This phenotype results in compromised ability to close stomata in response to drought stress or pathogenic challenge, thereby exposing these plants to severe water loss and disease susceptibility[51][54]. Conversely, hsc70-1 loss-of-function mutants display hypersensitivity to ABA in seed germination assays and enhanced stomatal closure capacity, indicating that HSC70-1 normally suppresses ABA-responsive gene expression and signaling[51][54].
The molecular mechanism underlying HSC70-1's negative role in ABA signaling appears to involve interaction with auxin-responsive proteins and other regulators of hormone signal transduction, though the precise target remains incompletely defined. Co-immunoprecipitation and yeast two-hybrid experiments identify the HSP70-HSP90 organizing protein (HOP) family cochaperones as key intermediaries linking HSC70-1 to auxin signaling, with HOP proteins forming stable complexes with HSC70-1 and serving to stabilize the auxin receptor TIR1[50][53]. The finding that HOP overexpression enhances ABA sensitivity while hop triple mutants display ABA resistance suggests that the HOP-HSC70-1-HSP90 chaperone axis may also regulate ABA signaling through parallel mechanisms[53]. Notably, HSC70-1 and HSP90 proteins are required to establish basal expression levels of multiple ABA-responsive genes, suggesting that the chaperone machinery directly influences the transcriptional set-point for ABA sensitivity[51][54].
The differential effects of HSC70-1 on dark-induced, COβ-induced, flg22-induced, and ABA-induced stomatal closure suggest that HSC70-1 targets a common downstream component of these distinct signaling pathways rather than operating on individual receptors[51][54]. Evidence implicates HSP90 ATPase activity as epistatic to ABA signaling, with pharmacological inhibition of HSP90 by radicicol effectively phenocopying the stomatal closure defect observed in hsp90.2 mutants or HSC70-1-overexpressing plants[51][54]. This genetic epistasis framework indicates that HSC70-1 functions upstream of HSP90 in promoting guard cell responsiveness. The requirement for both HSC70-1 and HSP90 ATPase activity in stomatal closure suggests a model wherein the HSC70-1:HSP90 chaperone pair regulates the stability or activity of a critical target protein required for convergent signaling from diverse environmental cues. The identity of this target remains an active area of investigation but may include OPEN STOMATA 1 (OST1) and related SnRK2 kinases, which are central to guard cell ABA signaling.
HSC70-1 participates in the co-translational folding of nascent polypeptides through association with actively translating ribosomes[37][40]. Biochemical studies using ribosome affinity purification and mass spectrometry reveal that HSC70-1 is constitutively bound to a subset of translating ribosomes, where it engages nascent polypeptide chains as they emerge from the ribosomal exit tunnel[37]. The specificity of this ribosomal association is not random; HSC70-1 preferentially binds to ribosomes translating slowly-decoded mRNAs, particularly those encoding multidomain proteins with predicted slow folding rates[37]. The functional outcome of this co-translational chaperoning is the stabilization of nascent chains in a monomeric, aggregation-resistant state, which facilitates efficient folding upon release from the ribosome[37]. Deletion of genes encoding ribosome-associated Hsp70s results in widespread aggregation of newly synthesized polypeptides, demonstrating the essential function of this co-translational chaperoning activity. Interestingly, the selective translation of HSC70-1 mRNA itself during heat stress involves specialized regulatory mechanisms distinct from those controlling general protein synthesis, including structured leader regions that bypass cap-dependent translation repression during stress[40].
Evidence from plant mitochondrial import studies indicates that HSC70-1 also participates in the post-translational import of nuclear-encoded proteins into mitochondria through a mechanism conserved from prokaryotes to mammals[38][41]. In this pathway, HSC70-1 functions as the principal component of the presequence translocase-associated motor (PAM) complex, which operates within the mitochondrial matrix[41]. Newly synthesized proteins destined for the mitochondria are maintained in a translocation-competent, unfolded state through interactions with cytoplasmic HSC70-1 and associated J-domain proteins, which deliver them to the translocase of the outer membrane (TOM) complex[38]. Once the polypeptide enters the matrix-facing translocase of the inner membrane (TIM) pore, matrix-localized Hsp70 (mtHsp70) and associated J-domain proteins capture the incoming polypeptide chain through repeated ATP hydrolysis cycles[41]. The energetic basis for this translocation motor involves "entropic pulling," wherein HSC70-1 and mtHsp70 successively bind to the emerging polypeptide, preventing backward diffusion through the import pore while the expanding chaperone complex excludes volume and creates a net mechanical force driving the polypeptide forward[41]. Importantly, this mechanism is capable of translocating tightly folded proteins that would normally be unable to traverse the narrow translocase pore, representing an essential function for the import of larger proteins such as multi-subunit enzyme complexes.
HSC70-1 serves as the primary ATPase driving the uncoating of clathrin-coated vesicles (CCVs) following their budding from the plasma membrane, a process essential for clathrin recycling and continued endocytic capacity[56][59]. In this role, HSC70-1 works in concert with the J-domain protein auxilin, which localizes to CCVs and recruits HSC70-1 to the coated vesicle surface[56]. Recombinant HSC70-1 exhibits robust clathrin-uncoating ATPase activity in vitro, with the rate of ATP hydrolysis being dramatically stimulated by auxilin (typically 15-50 fold depending on experimental conditions)[56][59]. The uncoating reaction proceeds through a mechanism wherein HSC70-1:auxilin complexes progressively bind to clathrin triskelions within the clathrin lattice, destabilizing the protein-protein interactions that hold the cage structure together[56][59]. The mechanical force generated by conformational changes in HSC70-1 during ATP hydrolysis drives the dissociation of individual clathrin triskelions from the lattice, ultimately causing collapse of the clathrin-coated pit structure[56][59].
Genetic evidence supporting this role derives from the characterization of Drosophila hsc70-4 mutants carrying a point mutation (R447H) in the nucleotide-binding domain that substantially reduces ATPase activity[56]. Clones of mutant hsc70-4 cells exhibit a dramatic reduction in clathrin-coated structures and show profound defects in endocytosis of multiple cargo proteins, including the crystalline Bride of Sevenless (Boss) protein required for eye development[56]. Notably, the mutant also displays genetic interaction with dominant-negative dynamin mutants, which block early stages of clathrin-coated vesicle formation, indicating that HSC70-1 uncoating function is required for efficient recycling of clathrin to support continued endocytic uptake[56].
Beyond its classical role in post-fission uncoating, recent evidence reveals that HSC70-1 participates in quality control mechanisms that operate during the assembly phase of clathrin-coated pits (CCPs), before vesicle scission[59]. Cell-free reconstitution experiments using purified clathrin, adaptor proteins, and lipid bilayers demonstrate that HSC70-1 activity is required for efficient cargo enrichment into growing clathrin coats[59]. In the absence of HSC70-1 function, clathrin successfully assembles into pit-like structures but fails to concentrate cargo proteins, indicating a defect in cargo sorting rather than in coat assembly per se[59]. Single-molecule imaging reveals that HSC70-1 drives a dynamic exchange of clathrin molecules during the assembly phase, with individual triskelions transiently assembling and disassembling from the growing coat even before vesicle fission[59]. This dynamic exchange, which is energetically expensive and reduces overall assembly rates, appears to function as a proofreading mechanism that actively monitors whether cargo has been properly concentrated into the pit; misassembled or poorly loaded clathrin structures are disassembled and recycled, while correctly assembled pits progress to fission[59].
HSC70-1 contributes to plant innate immune responses through its role in effector-triggered immunity (ETI), wherein plant resistance proteins recognize pathogen-secreted effectors and activate a hypersensitive response[28][36]. The nucleotide-binding domain-leucine-rich repeat (NB-LRR) proteins that serve as primary resistance sensors require functional HSC70-1 for proper folding, oligomerization, and activation in response to pathogen challenge[28][36]. These immune receptors are maintained in a poised-but-inactive state through the combined action of the SGT1 co-chaperone and HSP90, with HSC70-1 serving to maintain the overall stability of HSP90:SGT1:NB-LRR complexes[28][36]. Upon infection with a pathogen expressing a cognate effector, the binding of the effector to the NB-LRR protein triggers nucleotide exchange within the NB-LRR's intrinsic ATPase domain, inducing conformational changes that activate the receptor for signaling through downstream pathways[28].
Notably, transgenic plants overexpressing HSP70-1 display reduced NB-LRR-dependent immunity, manifesting as compromised resistance to certain pathogenic strains[28][36]. This negative effect of HSP70-1 overexpression on immunity appears paradoxical but likely reflects sequestration of limiting amounts of SGT1 and HSP90 away from NB-LRR complexes toward other HSP70-1-bound client proteins, thereby reducing the effective concentration of chaperone complex available for immune receptor regulation[28][36]. The finding that careful balance of HSC70-1 levels is required for optimal immunity suggests that this chaperone functions as a fine-tuning element in immune signaling rather than as an unconditional activator of immune responses.
Beyond its role in facilitating NB-LRR signaling, HSC70-1 also participates in immune-suppressive mechanisms that maintain immune homeostasis and prevent excessive inflammatory responses[14][49]. HSC70-1 binds to pattern recognition receptors (PRRs) such as Toll-like receptor 2 (TLR2) and TLR4 on antigen-presenting cells, inducing these cells to secrete transforming growth factor-Ξ² (TGF-Ξ²) and other anti-inflammatory cytokines[14]. Through this mechanism, HSC70-1 promotes the differentiation of naive T cells into regulatory T cells (Tregs), which actively suppress excessive immune responses and maintain immune tolerance[14][49]. Additionally, HSC70-1 inhibits the NLRP3 inflammasome, a key component of innate immune signal amplification, through direct physical interaction that stabilizes the inactive conformation of NLRP3[14][49]. This immunosuppressive role of HSC70-1 becomes particularly important in preventing autoimmune diseases and maintaining the balance between protective immunity and harmful excessive inflammation.
Analysis of HSC70-1 expression across Arabidopsis tissues and developmental stages reveals a constitutive but tissue-biased expression pattern[29]. Quantitative reverse transcription PCR analysis demonstrates that HSC70-1 transcripts are detected at relatively high levels in all organs examined, with particularly abundant expression in leaves and roots[29]. The transcript levels remain relatively stable across the major developmental stages of seedling establishment, vegetative growth, and reproductive development, reflecting the housekeeping role of HSC70-1 in maintaining basal proteostasis[29]. Interestingly, within the root, HSC70-1 expression is modestly elevated compared to other Hsp70 family members, potentially reflecting the high translational activity associated with root cell division and elongation[29]. The maintenance of substantial constitutive expression of HSC70-1 contrasts sharply with heat-inducible Hsp70 genes, which show minimal basal expression and can be induced 10-50 fold upon heat stress[29]. This differential regulation ensures that the cell maintains a continuous supply of constitutive HSC70-1 to manage normal protein folding demands without requiring rapid transcriptional induction during acute stress.
While HSC70-1 is not primarily heat-inducible, detailed analysis reveals that HSC70-1 expression shows modest increases (typically 1.5-3 fold) following heat shock treatments in some experimental conditions[29]. In contrast, the closely related cytosolic HSC70-2 and HSC70-3 are more strongly heat-inducible (2-5 fold and higher), suggesting functional differentiation within the cytosolic Hsp70 subfamily[29]. The relatively stable expression of HSC70-1 mRNA across temperatures likely reflects regulatory mechanisms distinct from those controlling heat-inducible Hsp70 genes, with HSC70-1 transcript stability and translation potentially being maintained through constitutive transcription factor binding rather than stress-dependent transcriptional induction. Recent evidence indicates that HSC70-1 translation is actively maintained during heat stress through mRNA secondary structures in the 5' untranslated region that bypass the global cap-dependent translation repression that affects most mRNAs during stress[40].
HSC70-1 is subject to extensive post-translational modifications that collectively constitute a "chaperone code" capable of rapidly modulating its activity, localization, and client specificity without requiring de novo protein synthesis[28][36][60]. Phosphorylation represents the most abundant modification, with multiple kinase consensus sites identified within the nucleotide-binding domain and substrate-binding domain of HSC70-1[28]. Phosphorylation at specific sites has been demonstrated to enhance HSC70-1 ATPase activity and alter its client specificity, allowing rapid adaptation of chaperone function to stress conditions without transcriptional delay[28]. Acetylation at lysine residues, particularly within the nucleotide-binding domain, modulates the thermodynamic stability of the ATP-bound state and influences HSC70-1's affinity for both nucleotides and substrates[28]. Additionally, sulfenylation of conserved cysteine residues in the substrate-binding domain occurs following oxidative stress and has been shown to activate heat shock transcription in yeast, suggesting that redox-dependent modifications of HSC70-1 may directly sense oxidative stress and activate appropriate transcriptional responses[28][36]. The reversibility of these modifications (through protein phosphatases, deacetylases, and thioredoxin-mediated reduction) allows HSC70-1's function to be dynamically tuned in response to the evolving cellular environment.
HSC70-1 function is critically dependent on interactions with diverse J-domain proteins (JDPs), which constitute the largest class of HSC70-1 cochaperones[21][24][36]. J-domain proteins stimulate HSC70-1 ATPase activity through binding near the interdomain linker of HSC70-1, with this interaction triggering a conformational change that dramatically increases the rate of ATP hydrolysis[21]. The human proteins DnaJB1 (Hdj-1) and DnaJB2 (Hdj-2) exemplify a class of type I J-domain proteins that contain not only the conserved J domain but also client protein-binding domains (C-terminal domains I and II) that can independently recognize misfolded substrates[21][24]. Different J-domain proteins show distinct substrate specificities and functional outcomes; for instance, DnaJB2 alone can stimulate HSC70-1-mediated refolding of denatured luciferase, while DnaJB1 is much less effective, and inclusion of both proteins results in complex interactions where DnaJB1 can actually inhibit DnaJB2-mediated refolding under certain conditions[21]. These findings indicate that the J-domain protein complement present in any given cellular context effectively "programs" HSC70-1 for specific functions, with different J-domain proteins optimizing the chaperone for distinct cellular tasks.
A striking recent discovery involves the self-association equilibrium of J-domain proteins such as DNAJA2, which forms highly organized oligomeric structures in the absence of HSC70-1[24]. Cryo-electron microscopy reveals that DNAJA2 assembles into tubular structures with defined helical symmetry, with the J-domains positioned on the surface to be accessible to HSC70-1[24]. Upon binding of HSC70-1, these tubular oligomers are actively disassembled into monomers and dimers, which then show enhanced capacity to interact with unfolded client proteins[24]. This unexpected mechanism suggests that HSC70-1 not only stimulates J-domain protein ATP-ase activity through the J domain but also actively regulates the oligomerization state of J-domain proteins, thereby controlling their holding capacity and client transfer efficiency.
Following HSC70-1-mediated ATP hydrolysis and formation of tight ADP-bound complexes with substrates, nucleotide exchange factors (NEFs) catalyze the thermodynamically unfavorable release of tightly-bound ADP and its replacement with ATP[33]. The three major classes of eukaryotic NEFs operate through mechanistically distinct pathways[33]. Hsp110/Grp170 family proteins function as nucleotide exchange factors that bind to HSC70-1 and stabilize open conformations of its nucleotide-binding domain, allowing ADP to dissociate and new ATP to bind[58]. The structure of the Hsp110:Hsc70 complex reveals extensive protein-protein contacts between the two NBDs, with the Hsp110 SBD extending long Ξ±-helical elements that stabilize the open state of Hsc70 NBD by preventing the lobes from closing[58]. HspBP1/Sil1 family proteins employ a different structural strategy, using their bulk mass to sterically lock the Hsc70 NBD in an open conformation, with some HspBP1 homologs inducing partial unfolding of the NBD domains to facilitate nucleotide release[33]. BAG-domain proteins represent a third class of NEFs that interact with HSC70-1 through their conserved BAG domain, which makes contacts near subdomain IIB of the NBD to favor the open conformation[33].
Different NEF families show distinct kinetic properties and regulation, suggesting that selective recruitment of specific NEFs to different cellular compartments or under different stress conditions allows fine-tuning of HSC70-1 function. For instance, in plant systems, the plant ortholog of yeast Sse1 (designated AtHsp70-15 in Arabidopsis) functions as an NEF with particularly important roles in maintaining basal proteostasis[43][48]. Loss-of-function alhsp70-15 mutants exhibit severe growth retardation, impaired stomatal closure, and drastically increased susceptibility to heat stress, indicating that this NEF controls HSC70-1 turnover rates and client release kinetics in a manner essential for normal development[43].
HSC70-1 physically interacts with HSP90, the other major Hsp chaperone family in plant cytoplasm, to coordinate their client interactions and enhance the stability and function of particularly challenging substrates[51][54]. The association between HSC70-1 and HSP90 appears to be mediated through multiple cochaperone adaptors, particularly SGT1 (suppressor of G2 allele of skp1) and HOP (HSP90/HSP70-organizing protein)[50][53]. SGT1 contains tetratricopeptide repeat (TPR) domains that specifically recognize the C-terminal EEVD motif of HSC70-1 and can simultaneously bind HSP90 through distinct protein-protein interaction surfaces[50][53]. HOP proteins similarly contain multiple TPR domains and are capable of forming bridges between HSC70-1 and HSP90, creating ternary complexes wherein both chaperones cooperate in substrate binding and remodeling[50][53]. The organization of these HSC70-1:HOP:HSP90 complexes appears to facilitate the transfer of substrates from HSC70-1 (which specializes in initially capturing unfolded or nascent substrates) to HSP90 (which is optimized for stabilizing partially folded intermediates in committed conformations). Notably, HOP proteins also participate in coordinating the stability of auxin receptors (TIR1) and related signaling proteins, potentially explaining the requirement for HSC70-1:HOP:HSP90 complexes in promoting auxin signaling and the resultant ABA resistance observed in plants overexpressing these cochaperones.
HSC70-1 emerges from this detailed analysis as a central integrator of cellular protein homeostasis that simultaneously manages multiple distinct functionsβfrom immediate protein folding and protection against aggregation to transcriptional control of heat stress responses and fine-tuning of hormone signaling. The constitutive expression of HSC70-1, in contrast to heat-inducible Hsp70 genes, reflects its fundamental housekeeping roles in ribosome-associated protein folding and co-translational quality control. However, the stress-responsive subcellular redistribution of HSC70-1, its direct regulation of HSF1 activity, and its negative control of heat shock factor A proteins demonstrate that this apparently constitutive chaperone is in fact dynamically deployed to meet acute cellular demands during stress adaptation. The paradoxical finding that HSC70-1 loss-of-function enhances basal thermotolerance, together with the negative regulatory role of HSC70-1 in ABA signaling and stomatal control, suggests that HSC70-1 serves as a metabolic checkpoint that constrains resource allocation to stress responses under normal conditions, allowing the cell to maintain normal growth and development without the energy burden of maximal defense activation. The extensive network of cochaperone interactions, post-translational modifications, and substrate specificity determinants indicates that HSC70-1 function is not static but rather dynamically reconfigured in response to changes in cellular proteostasis burden, nutrient availability, and environmental stress. Future research directed toward understanding how post-translational modifications of HSC70-1 affect its interactions with specific J-domain proteins and how subcellular sequestration of HSC70-1 and its cochaperones is dynamically regulated will further illuminate the principles by which cells coordinate multiple essential functions through a single multifunctional molecular chaperone. The conservation of HSC70-1 orthologs across the plant kingdom and the functional importance demonstrated through knockout studies and transgenic overexpression analysis indicate that HSC70-1 represents an attractive target for agricultural biotechnology aimed at improving plant stress tolerance and development.
HSP70-1/HSC70-1 is a cytosolic and nuclear Hsp70-family molecular chaperone. The
review keeps the core functions focused on ATP-dependent protein folding/refolding
and HSF/HSP101-linked regulation of basal thermotolerance.
GO:0140297 DNA-binding transcription factor binding, not unfolded protein binding.NOT located_in cytosolSGT1/immune, stomatal closure, ABA/seed germination, mRNA-binding, protease-binding,
and high-throughput localization annotations are retained only where existing GOA
evidence supports them and are treated as non-core or context-specific.
Earlier notes proposed clathrin uncoating as a current HSP70-1 curation conclusion.
That Perplexity-only mechanism is not retained in the YAML review; the plasma membrane
HDA annotation is kept only as a low-specificity, non-core proteomics localization.
The YAML review treats HSP70-1 as a cytosolic/nuclear Hsp70 chaperone with a core
ATP-dependent protein-folding role and a supported regulatory role in basal
thermotolerance through HsfA/HSP101 control.
NOT located_in
cytosol and conflicts with positive localization evidence.GO:0140297 DNA-binding transcription factor binding.Earlier draft summaries proposed GO:0051082 unfolded protein binding for HsfA
interactions and framed clathrin uncoating as a current curation conclusion. Those
recommendations are not retained.
---
id: P22953
gene_symbol: HSP70-1
product_type: PROTEIN
status: COMPLETE
taxon:
id: NCBITaxon:3702
label: Arabidopsis thaliana
description: HSP70-1/HSC70-1 is a cytosolic and nuclear Arabidopsis Hsp70-family
molecular chaperone. Its best-supported core role is ATP-dependent chaperone function
in protein folding/refolding and proteostasis. Experimental evidence also supports
a regulatory role in basal thermotolerance through physical interaction with HsfA1d
and HsfA1e and modulation of Hsp101 expression. Additional roles in immunity, ABA-linked
stomatal closure, seed germination, mRNA binding, and protein interactions are retained
where supported by existing annotations, but they are treated as non-core or context-specific
rather than as the primary function of the gene product.
core_functions:
- description: ATP-dependent Hsp70-family chaperone activity supporting protein
folding, refolding, and proteostasis in the cytosol and nucleus.
molecular_function:
id: GO:0044183
label: protein folding chaperone
directly_involved_in:
- id: GO:0006457
label: protein folding
- id: GO:0042026
label: protein refolding
locations:
- id: GO:0005829
label: cytosol
- id: GO:0005634
label: nucleus
substrates:
- id: GO:0051082
label: unfolded protein binding
supported_by:
- reference_id: file:ARATH/AT5G02500/AT5G02500-deep-research-falcon.md
supporting_text: HSP70/HSC70 proteins are **ATP-dependent molecular chaperones**
central to cytosolic proteostasis
- reference_id: file:ARATH/AT5G02500/AT5G02500-uniprot.txt
supporting_text: In cooperation with other chaperones, Hsp70s are key components
that facilitate folding of de novo synthesized proteins, assist translocation
of precursor proteins into organelles, and are responsible for degradation
of damaged protein under stress conditions
- reference_id: PMID:11402207
supporting_text: comprehensive reverse transcriptase-polymerase chain reaction
analysis for 11 hsp70s was conducted including analysis of organ-specific
and developmental expression
- description: Negative regulation of basal thermotolerance through interaction
with HsfA transcription factors and control of Hsp101 expression.
molecular_function:
id: GO:0140297
label: DNA-binding transcription factor binding
directly_involved_in:
- id: GO:1900034
label: regulation of cellular response to heat
locations:
- id: GO:0005829
label: cytosol
- id: GO:0005634
label: nucleus
supported_by:
- reference_id: file:ARATH/AT5G02500/AT5G02500-deep-research-falcon.md
supporting_text: HSC70-1 physically interacts with **HsfA1d and HsfA1e**
(Y2H and BiFC), with interaction signals reported primarily in the cytosol,
supporting a model in which HSC70-1 restrains HSF activity under non-stress
conditions.
- reference_id: PMID:32573848
supporting_text: Hsc70-1 showed physical interaction with HsfA1d and HsfA1e
protein in the cytosol under non-HS conditions.
- reference_id: PMID:32573848
supporting_text: We provide genetic evidence that Hsc70-1 is a negative regulator
affecting HsfA1d/A1e/A2 activators, which in turn regulate Hsp101 expression
and basal thermotolerance.
existing_annotations:
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: HSC70-1 is predominantly localized to the cytoplasm under non-stress
conditions, where it maintains HSF transcription factors in their inactive
state and performs housekeeping protein folding functions.
action: ACCEPT
reason: Well-supported by IBA phylogenetic inference and experimental evidence.
PMID:32573848 demonstrates cytoplasmic localization and shows HSC70-1 sequesters
HsfA1d and HsfA1e in the cytosol under non-heat stress conditions. PMID:18065690
confirms cytoplasmic distribution. This is a core cellular localization for
HSC70-1's primary functions.
supported_by:
- reference_id: PMID:32573848
supporting_text: Hsc70-1 showed physical interaction with HsfA1d and HsfA1e
protein in the cytosol under non-HS conditions.
- reference_id: PMID:18065690
supporting_text: Arabidopsis SGT1a and SGT1b proteins associate with HSC70
in vivo and distribute with HSC70 in the cytosol and nucleus.
- term:
id: GO:0016887
label: ATP hydrolysis activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: HSC70-1 possesses ATP hydrolysis activity that is essential for its
chaperone function, driving conformational changes between ATP-bound (low
substrate affinity) and ADP-bound (high substrate affinity) states.
action: ACCEPT
reason: Core molecular function of all Hsp70 family members. ATP hydrolysis
is the central enzymatic activity that powers the protein folding cycle. Deep
research confirms ATP-dependent conformational cycles are fundamental to HSC70-1
function.
additional_reference_ids:
- file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supported_by:
- reference_id: file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supporting_text: In its ATP-bound conformation, HSC70-1 adopts an open state
with substantially reduced affinity for protein substrates... Upon binding
of a J-domain protein cochaperone... the ATPase activity of HSC70-1 is
stimulated approximately 20-100 fold, accelerating the hydrolysis of ATP
to ADP.
- term:
id: GO:0031072
label: heat shock protein binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: HSC70-1 binds to other heat shock proteins, particularly through interactions
with HSF transcription factors and potentially other Hsps in chaperone complexes.
action: MODIFY
reason: The local experimental support is physical interaction with HsfA1d and
HsfA1e, which are DNA-binding heat shock transcription factors rather than
unfolded protein substrates. The more specific replacement captures the
supported HSF-client interaction without converting it to unfolded protein
binding.
proposed_replacement_terms:
- id: GO:0140297
label: DNA-binding transcription factor binding
supported_by:
- reference_id: PMID:32573848
supporting_text: Hsc70-1 showed physical interaction with HsfA1d and HsfA1e
protein in the cytosol under non-HS conditions.
- term:
id: GO:0044183
label: protein folding chaperone
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: HSC70-1 functions as a protein folding chaperone, facilitating ATP-dependent
folding of nascent and misfolded proteins.
action: ACCEPT
reason: Core molecular function well-supported by IBA and literature. HSC70-1
is a canonical member of the Hsp70 chaperone family with established protein
folding activity.
additional_reference_ids:
- file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supported_by:
- reference_id: file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supporting_text: HSC70-1 functions as a molecular chaperone through an ATP-driven
cycle that enables rapid, reversible binding to client protein substrates
while maintaining extremely low intrinsic ATP hydrolysis rates that must
be stimulated by cochaperones.
- term:
id: GO:0042026
label: protein refolding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: HSC70-1 participates in protein refolding through ATP-dependent cycles
of substrate binding and release, particularly during stress recovery.
action: ACCEPT
reason: Well-supported by IBA phylogenetic evidence. Protein refolding is a
core Hsp70 family function, particularly important during recovery from heat
stress when aggregated proteins must be resolubilized.
additional_reference_ids:
- file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supported_by:
- reference_id: file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supporting_text: HSC70-1 possesses the capacity to actively unfold and disaggregate
stable, pre-formed protein aggregates through a mechanism termed entropic
pulling.
- term:
id: GO:0000166
label: nucleotide binding
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: HSC70-1 binds ATP and ADP nucleotides as part of its chaperone cycle.
action: ACCEPT
reason: Accurate but generic IEA annotation. Nucleotide binding is essential
for HSC70-1 function, though 'ATP binding' is more specific and already annotated.
- term:
id: GO:0005524
label: ATP binding
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: HSC70-1 binds ATP in its nucleotide-binding domain, with ATP hydrolysis
driving conformational changes.
action: ACCEPT
reason: Core molecular function supported by IEA and extensive literature. ATP
binding is fundamental to all Hsp70 chaperone activity.
- term:
id: GO:0005634
label: nucleus
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: HSC70-1 can translocate to the nucleus, particularly during heat stress
when it co-localizes with HSF1.
action: ACCEPT
reason: Accurate IEA annotation supported by experimental evidence. HSC70-1
contains nuclear localization signals and undergoes stress-induced nuclear
translocation.
additional_reference_ids:
- file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
- PMID:32573848
supported_by:
- reference_id: file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supporting_text: Upon exposure to elevated temperatures, HSC70-1 undergoes
rapid translocation to the nucleus in a process that is dependent on simultaneous
nuclear import of heat shock factor 1 (HSF1).
- reference_id: PMID:18065690
supporting_text: Arabidopsis SGT1a and SGT1b proteins associate with HSC70
in vivo and distribute with HSC70 in the cytosol and nucleus.
- reference_id: PMID:32573848
supporting_text: AtHsc70-1 negatively regulates the basal heat tolerance
in Arabidopsis thaliana through affecting the activity of HsfAs and Hsp101.
- term:
id: GO:0006952
label: defense response
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: HSC70-1 contributes to defense response through its role in maintaining
NB-LRR immune receptor stability and function.
action: KEEP_AS_NON_CORE
reason: HSC70-1 does participate in immune responses (PMID:18065690), but this
is a pleiotropic function rather than core molecular activity. Overexpression
actually impairs immunity, suggesting a complex regulatory role.
supported_by:
- reference_id: PMID:18065690
supporting_text: HSC70-1 overexpression disables resistance to virulent
and avirulent pathogens.
- term:
id: GO:0009408
label: response to heat
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: HSC70-1 responds to heat stress through nuclear translocation and regulation
of HSF activity, though paradoxically its loss enhances basal thermotolerance.
action: ACCEPT
reason: The term 'response to heat' is appropriate but doesn't fully capture
HSC70-1's NEGATIVE regulatory role. However, there isn't a perfect replacement
term. The annotation is accurate as HSC70-1 does respond to and participate
in heat stress responses, even though it paradoxically acts as a negative
regulator of basal thermotolerance. Accept with this caveat.
supported_by:
- reference_id: PMID:32573848
supporting_text: Arabidopsis hsc70-1 mutant seedlings show elevated basal
heat tolerance compared with wild-type.
- term:
id: GO:0009615
label: response to virus
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: HSC70-1 is induced by viral infection as part of general protein stress
response.
action: KEEP_AS_NON_CORE
reason: While HSC70-1 is upregulated during viral infection, this represents
a general stress response rather than a specific antiviral function. The primary
role is managing protein folding stress caused by viral protein accumulation.
- term:
id: GO:0016887
label: ATP hydrolysis activity
evidence_type: IEA
original_reference_id: GO_REF:0000002
review:
summary: Duplicate annotation - ATP hydrolysis activity already covered by IBA
annotation.
action: ACCEPT
reason: Duplicate of IBA annotation for same term. Both IBA and IEA evidence
support this core molecular function.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18065690
review:
summary: HSC70-1 binds to SGT1B protein through direct physical interaction.
action: KEEP_AS_NON_CORE
reason: The SGT1B interaction is experimentally supported, but SGT1 is a
co-chaperone/adaptor in immune receptor complex assembly rather than a
canonical protein-folding chaperone. Retain the existing protein-binding
annotation as context-specific, non-core evidence rather than replacing it
with protein-folding chaperone binding.
supported_by:
- reference_id: PMID:18065690
supporting_text: We affinity-purified SGT1-interacting proteins from Arabidopsis
thaliana leaf extracts and identified by mass spectrometry cytosolic heat
shock cognate 70 (HSC70) chaperones as the major stable SGT1 interactors.
- term:
id: GO:0010494
label: cytoplasmic stress granule
evidence_type: IDA
original_reference_id: PMID:30664249
review:
summary: HSC70-1 localizes to cytoplasmic stress granules under stress conditions.
action: ACCEPT
reason: Supported by IDA experimental evidence from PMID:30664249. Stress granule
localization is consistent with HSC70-1's role in managing protein aggregation
during stress.
supported_by:
- reference_id: PMID:30664249
supporting_text: Protein and metabolite composition of Arabidopsis stress
granules.
- term:
id: GO:0000325
label: plant-type vacuole
evidence_type: HDA
original_reference_id: PMID:17151019
review:
summary: HSC70-1 detected in plant-type vacuole by proteomics.
action: MARK_AS_OVER_ANNOTATED
reason: HDA (high-throughput direct assay) from proteomics. Likely represents
minor contaminant or transient localization rather than functional compartment.
Primary localization is cytosol/nucleus.
supported_by:
- reference_id: PMID:17151019
supporting_text: Epub 2006 Dec 6. A proteomics dissection of Arabidopsis
thaliana vacuoles isolated from cell culture.
- term:
id: GO:0005794
label: Golgi apparatus
evidence_type: HDA
original_reference_id: PMID:22430844
review:
summary: HSC70-1 detected in Golgi apparatus by proteomics.
action: MARK_AS_OVER_ANNOTATED
reason: HDA proteomics annotation. Likely over-annotation as Golgi is not a
known functional compartment for cytosolic Hsp70s. May represent transient
association or contamination.
supported_by:
- reference_id: PMID:22430844
supporting_text: Mar 19. Isolation and proteomic characterization of the
Arabidopsis Golgi defines functional and novel components involved in
plant cell wall biosynthesis.
- term:
id: GO:0009505
label: plant-type cell wall
evidence_type: HDA
original_reference_id: PMID:16287169
review:
summary: HSC70-1 detected in plant-type cell wall by proteomics.
action: MARK_AS_OVER_ANNOTATED
reason: HDA proteomics annotation. HSC70-1 lacks secretion signals and functions
as cytosolic chaperone. Cell wall detection likely represents contamination
in cell wall preparations.
supported_by:
- reference_id: PMID:16287169
supporting_text: Arabidopsis cell wall proteome defined using multidimensional
protein identification technology.
- term:
id: GO:0005730
label: nucleolus
evidence_type: HDA
original_reference_id: PMID:15496452
review:
summary: HSC70-1 detected in nucleolus by proteomics.
action: KEEP_AS_NON_CORE
reason: HDA proteomics evidence. While HSC70-1 does translocate to nucleus during
stress, nucleolus localization is not a primary function. May represent legitimate
but minor localization.
supported_by:
- reference_id: PMID:15496452
supporting_text: Oct 20. Proteomic analysis of the Arabidopsis nucleolus
suggests novel nucleolar functions.
- term:
id: GO:0048046
label: apoplast
evidence_type: HDA
original_reference_id: PMID:18538804
review:
summary: HSC70-1 detected in apoplast by proteomics.
action: MARK_AS_OVER_ANNOTATED
reason: HDA proteomics annotation. Apoplast is extracellular space - HSC70-1
lacks secretion signals and this likely represents contamination.
supported_by:
- reference_id: PMID:18538804
supporting_text: Epub 2008 Jun 5. Hydroponic isotope labelling of entire
plants (HILEP) for quantitative plant proteomics; an oxidative stress
case study.
- term:
id: GO:0005634
label: nucleus
evidence_type: HDA
original_reference_id: PMID:14617066
review:
summary: HSC70-1 detected in nucleus by proteomics (HDA evidence).
action: ACCEPT
reason: HDA evidence supports the well-established nuclear localization. This
complements the IEA and IDA annotations for nuclear localization.
supported_by:
- reference_id: PMID:14617066
supporting_text: Analysis of the Arabidopsis nuclear proteome and its response
to cold stress.
- term:
id: GO:0022626
label: cytosolic ribosome
evidence_type: HDA
original_reference_id: PMID:15821981
review:
summary: HSC70-1 detected in cytosolic ribosome by proteomics.
action: KEEP_AS_NON_CORE
reason: HDA proteomics evidence. Ribosome association is consistent with co-translational
folding function mentioned in deep research, but this is not a stable localization.
Represents transient functional association.
additional_reference_ids:
- file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supported_by:
- reference_id: file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supporting_text: HSC70-1 participates in the co-translational folding of
nascent polypeptides through association with actively translating ribosomes.
- reference_id: PMID:15821981
supporting_text: High heterogeneity within the ribosomal proteins of the
Arabidopsis thaliana 80S ribosome.
- term:
id: GO:0005886
label: plasma membrane
evidence_type: HDA
original_reference_id: PMID:17644812
review:
summary: HSC70-1 detected at plasma membrane by proteomics.
action: KEEP_AS_NON_CORE
reason: HDA proteomics evidence supports retaining the plasma membrane
localization as a non-core, low-specificity localization call. No
AT5G02500-specific clathrin-uncoating mechanism is asserted from this
annotation.
supported_by:
- reference_id: PMID:17644812
supporting_text: Epub 2007 Jul 20. A high content in lipid-modified peripheral
proteins and integral receptor kinases features in the arabidopsis plasma
membrane proteome.
- term:
id: GO:0009506
label: plasmodesma
evidence_type: HDA
original_reference_id: PMID:21533090
review:
summary: HSC70-1 detected in plasmodesma by proteomics.
action: MARK_AS_OVER_ANNOTATED
reason: HDA proteomics annotation. Plasmodesma localization is not supported
by functional studies. Likely represents contamination or very transient association.
supported_by:
- reference_id: PMID:21533090
supporting_text: Arabidopsis plasmodesmal proteome.
- term:
id: GO:0009507
label: chloroplast
evidence_type: HDA
original_reference_id: PMID:18431481
review:
summary: HSC70-1 detected in chloroplast by proteomics (HDA).
action: REMOVE
reason: HSC70-1 is a CYTOSOLIC Hsp70, not a chloroplast protein. Chloroplasts
have their own cpHsc70 proteins (At4g24280, At5g49910). This HDA annotation
represents contamination or mislabeling. UniProt does NOT indicate chloroplast
localization.
supported_by:
- reference_id: file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supporting_text: cpHsc70-1 and cpHsc70-2 are two putative stromal Hsp70s
in Arabidopsis [referring to At4g24280 and At5g49910]... HSC70-1 at AT5G02500
is the CYTOSOLIC one
- reference_id: PMID:18431481
supporting_text: Sorting signals, N-terminal modifications and abundance
of the chloroplast proteome.
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:32573848
review:
summary: HSC70-1 physically interacts with HsfA1d (AT1G32330) and HsfA1e (AT3G02990)
transcription factors.
action: MODIFY
reason: Generic 'protein binding' term is uninformative. The cited evidence is
physical interaction with HsfA1d and HsfA1e, so DNA-binding transcription
factor binding is the supported, more specific replacement.
proposed_replacement_terms:
- id: GO:0140297
label: DNA-binding transcription factor binding
supported_by:
- reference_id: PMID:32573848
supporting_text: Hsc70-1 showed physical interaction with HsfA1d and HsfA1e
protein in the cytosol under non-HS conditions.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:32573848
review:
summary: HSC70-1 localizes to nucleus as demonstrated by IDA in PMID:32573848.
action: ACCEPT
reason: Experimental IDA evidence supporting nuclear localization. Complements
other evidence (IEA, HDA) for nuclear presence.
supported_by:
- reference_id: file:ARATH/AT5G02500/AT5G02500-goa.tsv
supporting_text: The GOA source records an IDA located_in nucleus annotation
for HSP70-1 from PMID:32573848.
- reference_id: file:ARATH/AT5G02500/AT5G02500-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Cytoplasm, cytosol. Nucleus.'
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: PMID:32573848
review:
summary: HSC70-1 localizes to cytosol as demonstrated by IDA in PMID:32573848.
action: ACCEPT
reason: Experimental IDA evidence for cytosolic localization, which is the primary
compartment for HSC70-1 function.
supported_by:
- reference_id: PMID:32573848
supporting_text: Hsc70-1 showed physical interaction with HsfA1d and HsfA1e
protein in the cytosol under non-HS conditions.
- term:
id: GO:0010286
label: heat acclimation
evidence_type: IMP
original_reference_id: PMID:32573848
review:
summary: HSC70-1 participates in heat acclimation process.
action: ACCEPT
reason: The heat acclimation annotation is reasonable but HSC70-1's role is
complex - it NEGATIVELY regulates basal heat tolerance. However, the IMP evidence
from PMID:32573848 is valid. Accept with the understanding that HSC70-1 modulates
(rather than directly promotes) heat acclimation.
supported_by:
- reference_id: PMID:32573848
supporting_text: Arabidopsis hsc70-1 mutant seedlings show elevated basal
heat tolerance compared with wild-type. Over-expression of Hsc70-1 resulted
in increased heat sensitivity.
- term:
id: GO:0003729
label: mRNA binding
evidence_type: IDA
original_reference_id: PMID:32344669
review:
summary: HSC70-1 binds mRNA as demonstrated by RNA interactome capture.
action: ACCEPT
reason: Experimental IDA evidence from PMID:32344669 using RNA interactome capture
method. mRNA binding is consistent with ribosome-associated protein folding
and potential roles in mRNA quality control.
supported_by:
- reference_id: PMID:32344669
supporting_text: Discovering the RNA-Binding Proteome of Plant Leaves with
an Improved RNA Interactome Capture Method.
- term:
id: GO:0005829
label: cytosol
evidence_type: HDA
original_reference_id: PMID:25293756
review:
summary: HSC70-1 detected in cytosol by proteomics (HDA).
action: ACCEPT
reason: HDA proteomics evidence supporting cytosolic localization, which is
the primary functional compartment.
supported_by:
- reference_id: PMID:25293756
supporting_text: Oct 7. A proteomic strategy for global analysis of plant
protein complexes.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: ISM
original_reference_id: GO_REF:0000122
review:
summary: Cytoplasm localization based on sequence analysis (ISM).
action: ACCEPT
reason: ISM computational evidence from AtSubP analysis. Consistent with experimental
evidence for cytoplasmic localization.
- term:
id: GO:0009507
label: chloroplast
evidence_type: ISM
original_reference_id: GO_REF:0000122
review:
summary: Chloroplast localization predicted by sequence analysis (ISM).
action: REMOVE
reason: Incorrect ISM prediction. HSC70-1 is a cytosolic protein lacking chloroplast
transit peptide. Contradicts all experimental evidence and UniProt annotation.
supported_by:
- reference_id: file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supporting_text: HSC70-1 at AT5G02500 is the CYTOSOLIC one [not chloroplast].
The presence of the C-terminal GPKIEEVD sequence, rather than organellar
targeting peptides, ensures that HSC70-1 is directed to and retained within
the cytoplasmic compartment.
- term:
id: GO:0098542
label: defense response to other organism
evidence_type: IMP
original_reference_id: PMID:26408532
review:
summary: HSC70-1 involved in defense response to other organism as shown by
IMP in PMID:26408532.
action: KEEP_AS_NON_CORE
reason: Valid IMP evidence for role in immunity, but this is not a core function.
HSC70-1's role in immunity is through chaperone support of immune receptors,
and overexpression actually impairs defense (PMID:18065690).
supported_by:
- reference_id: PMID:18065690
supporting_text: HSC70-1 overexpression disables resistance to virulent
and avirulent pathogens.
- reference_id: PMID:26408532
supporting_text: Sep 25. Opposing Effects on Two Phases of Defense Responses
from Concerted Actions of HEAT SHOCK COGNATE70 and BONZAI1 in Arabidopsis.
- term:
id: GO:0009408
label: response to heat
evidence_type: IEP
original_reference_id: PMID:15805473
review:
summary: HSC70-1 expression pattern changes in response to heat (IEP evidence).
action: ACCEPT
reason: Valid IEP (expression pattern) evidence. While HSC70-1 is constitutively
expressed, it does show modest induction by heat stress.
supported_by:
- reference_id: PMID:15805473
supporting_text: Apr 1. Virus induction of heat shock protein 70 reflects
a general response to protein accumulation in the plant cytosol.
- term:
id: GO:0010187
label: negative regulation of seed germination
evidence_type: IMP
original_reference_id: PMID:21586649
review:
summary: HSC70-1 negatively regulates seed germination as shown by IMP in PMID:21586649,
consistent with its negative regulation of ABA responses.
action: KEEP_AS_NON_CORE
reason: IMP evidence supports HSC70-1's role in ABA-mediated germination control.
This is retained as a non-core, ABA-linked physiological effect rather than
as the central molecular function of this Hsp70 chaperone.
additional_reference_ids: [PMID:21586649]
supported_by:
- reference_id: PMID:21586649
supporting_text: Plants overexpressing HSC70-1 or with reduced HSP90.2 activity
are hypersensitive to ABA in seed germination assays
- term:
id: GO:0090332
label: stomatal closure
evidence_type: IMP
original_reference_id: PMID:21586649
review:
summary: HSC70-1 negatively regulates stomatal closure as shown by IMP in PMID:21586649.
action: KEEP_AS_NON_CORE
reason: The stomatal closure annotation is valid IMP evidence but HSC70-1 acts
as a NEGATIVE regulator - overexpression compromises closure. The term is
retained as a non-core physiological process because it reflects stress and
ABA signaling context rather than the primary chaperone activity.
supported_by:
- reference_id: PMID:21586649
supporting_text: Plants overexpressing HSC70-1 or with reduced HSP90.2 activity
are compromised in the dark-, CO(2)-, flagellin 22 peptide-, and abscisic
acid (ABA)-induced stomatal closure.
- term:
id: GO:0005829
label: cytosol
evidence_type: RCA
original_reference_id: PMID:21166475
negated: true
review:
summary: Negated cytosol localization based on RCA conflicts with positive
cytosol evidence for HSC70-1.
action: REMOVE
reason: The NOT qualifier means the annotation asserts that HSC70-1 is not
located in the cytosol, not merely that it is not exclusively cytosolic. That
interpretation conflicts with positive cytosol annotations, UniProt
cytosolic localization, and the PMID:21166475 cytosolic proteome context.
supported_by:
- reference_id: PMID:21166475
supporting_text: The cytosolic protein fraction from cell suspensions of
Arabidopsis thaliana was isolated and analyzed using offline strong
cation exchange liquid chromatography and LC-MS/MS.
- term:
id: GO:0005634
label: nucleus
evidence_type: IDA
original_reference_id: PMID:21418353
review:
summary: Nuclear localization demonstrated by IDA in PMID:21418353.
action: ACCEPT
reason: Experimental IDA evidence for nuclear presence. Consistent with dynamic
nucleo-cytoplasmic shuttling.
supported_by:
- reference_id: PMID:21418353
supporting_text: 2011 Apr 28. AtHsp70-15-deficient Arabidopsis plants are
characterized by reduced growth, a constitutive cytosolic protein response
and enhanced resistance to TuMV.
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: PMID:21418353
review:
summary: Cytosol localization demonstrated by IDA in PMID:21418353.
action: ACCEPT
reason: Experimental IDA evidence for primary cytosolic localization.
supported_by:
- reference_id: PMID:21418353
supporting_text: 2011 Apr 28. AtHsp70-15-deficient Arabidopsis plants are
characterized by reduced growth, a constitutive cytosolic protein response
and enhanced resistance to TuMV.
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IDA
original_reference_id: PMID:18065690
review:
summary: Cytoplasm localization demonstrated by IDA in PMID:18065690.
action: ACCEPT
reason: Experimental IDA evidence for cytoplasmic localization.
supported_by:
- reference_id: PMID:18065690
supporting_text: Dec 7. Interaction between SGT1 and cytosolic/nuclear HSC70
chaperones regulates Arabidopsis immune responses.
- term:
id: GO:0009408
label: response to heat
evidence_type: IMP
original_reference_id: PMID:18065690
review:
summary: HSC70-1 affects response to heat as shown by IMP in PMID:18065690.
action: ACCEPT
reason: Valid IMP evidence for HSC70 involvement in heat-stress tolerance
context. The cited paper supports SGT1/HSC70 complex roles in environmental
responses and notes that deregulation of HSC70-1 affects heat-shock
tolerance; the HSF/Hsp101 mechanism is supported by PMID:32573848, not this
annotation's original paper.
supported_by:
- reference_id: PMID:18065690
supporting_text: We conclude that an HSC70-SGT1 chaperone complex is
important for multiple plant environmental responses.
- term:
id: GO:0042742
label: defense response to bacterium
evidence_type: IMP
original_reference_id: PMID:18065690
review:
summary: HSC70-1 modulates defense responses to bacterial pathogens as shown
by IMP evidence in PMID:18065690, consistent with its immune receptor chaperone
role.
action: KEEP_AS_NON_CORE
reason: IMP evidence demonstrates HSC70-1 is required for proper defense against
bacterial pathogens via the HSC70-SGT1-HSP90 immune chaperone network, but
this is a context-specific outcome of chaperone function rather than the core
molecular role of HSP70-1.
supported_by:
- reference_id: PMID:18065690
supporting_text: HSC70-1 overexpression disables resistance to virulent
and avirulent pathogens.
- term:
id: GO:0050832
label: defense response to fungus
evidence_type: IMP
original_reference_id: PMID:18065690
review:
summary: HSC70-1 modulates defense responses to fungal pathogens as shown by
IMP evidence in PMID:18065690, consistent with its immune chaperone function.
action: KEEP_AS_NON_CORE
reason: IMP evidence supports HSC70-1's role in defense against fungal pathogens
via the HSC70-SGT1-HSP90 complex, but this is retained as a non-core immune
consequence of chaperone biology rather than a primary function.
supported_by:
- reference_id: PMID:18065690
supporting_text: HSC70-1 overexpression disables resistance to virulent
and avirulent pathogens.
- term:
id: GO:0002020
label: protease binding
evidence_type: IPI
original_reference_id: PMID:20543027
review:
summary: HSC70-1 binds to AMSH3 deubiquitinating enzyme (protease).
action: ACCEPT
reason: Valid IPI evidence from PMID:20543027. Protease binding represents a
specific interaction relevant to HSC70-1's role in protein quality control
and trafficking.
additional_reference_ids:
- file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supported_by:
- reference_id: file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
supporting_text: Binds to the deubiquitinating enzyme AMSH3.
- reference_id: PMID:20543027
supporting_text: The deubiquitinating enzyme AMSH3 is required for intracellular
trafficking and vacuole biogenesis in Arabidopsis thaliana.
- term:
id: GO:0009615
label: response to virus
evidence_type: IEP
original_reference_id: PMID:15805473
review:
summary: HSC70-1 expression responds to virus infection (IEP evidence).
action: KEEP_AS_NON_CORE
reason: Valid IEP expression evidence. HSC70-1 is induced by viral infection
but this reflects general protein stress response rather than specific antiviral
function.
supported_by:
- reference_id: PMID:15805473
supporting_text: Apr 1. Virus induction of heat shock protein 70 reflects
a general response to protein accumulation in the plant cytosol.
- term:
id: GO:0009408
label: response to heat
evidence_type: IEP
original_reference_id: PMID:11402207
review:
summary: HSC70-1 expression responds to heat (IEP evidence from PMID:11402207).
action: ACCEPT
reason: Valid IEP expression evidence showing heat responsiveness.
supported_by:
- reference_id: PMID:11402207
supporting_text: Comprehensive expression profile analysis of the Arabidopsis
Hsp70 gene family.
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: PMID:11402207
review:
summary: Cytosol localization based on TAS (traceable author statement) from
PMID:11402207.
action: ACCEPT
reason: TAS evidence from authoritative publication confirming cytosolic localization.
supported_by:
- reference_id: PMID:11402207
supporting_text: Comprehensive expression profile analysis of the Arabidopsis
Hsp70 gene family.
- term:
id: GO:0006457
label: protein folding
evidence_type: TAS
original_reference_id: PMID:11402207
review:
summary: HSC70-1 involved in protein folding based on TAS from PMID:11402207.
action: ACCEPT
reason: TAS evidence for core protein folding function. Well-established role
for all Hsp70 family members.
supported_by:
- reference_id: PMID:11402207
supporting_text: Comprehensive expression profile analysis of the Arabidopsis
Hsp70 gene family.
references:
- id: file:ARATH/AT5G02500/AT5G02500-deep-research-perplexity.md
title: Deep research report on HSC70-1 (AT5G02500) function and regulation.
findings: []
- id: file:ARATH/AT5G02500/AT5G02500-deep-research-falcon.md
title: Falcon deep research for HSP70-1
findings: []
- id: file:ARATH/AT5G02500/AT5G02500-notes.md
title: Curator notes for HSP70-1
findings: []
- id: file:ARATH/AT5G02500/AT5G02500-uniprot.txt
title: UniProt record for HSP70-1
findings: []
- id: file:ARATH/AT5G02500/AT5G02500-goa.tsv
title: GOA annotation source for HSP70-1
findings: []
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with GO
terms.
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000043
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location
vocabulary mapping, accompanied by conservative changes to GO terms applied
by UniProt.
findings: []
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning models
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods.
findings: []
- id: GO_REF:0000122
title: AtSubP analysis
findings: []
- id: PMID:11402207
title: Comprehensive expression profile analysis of the Arabidopsis Hsp70 gene
family.
findings: []
- id: PMID:14617066
title: Analysis of the Arabidopsis nuclear proteome and its response to cold stress.
findings: []
- id: PMID:15496452
title: Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar
functions.
findings: []
- id: PMID:15805473
title: Virus induction of heat shock protein 70 reflects a general response to
protein accumulation in the plant cytosol.
findings: []
- id: PMID:15821981
title: High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana
80S ribosome.
findings: []
- id: PMID:16287169
title: Arabidopsis cell wall proteome defined using multidimensional protein identification
technology.
findings: []
- id: PMID:17151019
title: A proteomics dissection of Arabidopsis thaliana vacuoles isolated from
cell culture.
findings: []
- id: PMID:17644812
title: A high content in lipid-modified peripheral proteins and integral receptor
kinases features in the arabidopsis plasma membrane proteome.
findings: []
- id: PMID:18065690
title: Interaction between SGT1 and cytosolic/nuclear HSC70 chaperones regulates
Arabidopsis immune responses.
findings: []
- id: PMID:18431481
title: Sorting signals, N-terminal modifications and abundance of the chloroplast
proteome.
findings: []
- id: PMID:18538804
title: Hydroponic isotope labelling of entire plants (HILEP) for quantitative
plant proteomics; an oxidative stress case study.
findings: []
- id: PMID:20543027
title: The deubiquitinating enzyme AMSH3 is required for intracellular trafficking
and vacuole biogenesis in Arabidopsis thaliana.
findings: []
- id: PMID:21166475
title: Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning
of central plant metabolism.
findings: []
- id: PMID:21418353
title: AtHsp70-15-deficient Arabidopsis plants are characterized by reduced growth,
a constitutive cytosolic protein response and enhanced resistance to TuMV.
findings: []
- id: PMID:21533090
title: Arabidopsis plasmodesmal proteome.
findings: []
- id: PMID:21586649
title: The cytosolic/nuclear HSC70 and HSP90 molecular chaperones are important
for stomatal closure and modulate abscisic acid-dependent physiological responses
in Arabidopsis.
findings: []
- id: PMID:22430844
title: Isolation and proteomic characterization of the Arabidopsis Golgi defines
functional and novel components involved in plant cell wall biosynthesis.
findings: []
- id: PMID:25293756
title: A proteomic strategy for global analysis of plant protein complexes.
findings: []
- id: PMID:26408532
title: Opposing Effects on Two Phases of Defense Responses from Concerted Actions
of HEAT SHOCK COGNATE70 and BONZAI1 in Arabidopsis.
findings: []
- id: PMID:30664249
title: Protein and metabolite composition of Arabidopsis stress granules.
findings: []
- id: PMID:32344669
title: Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA
Interactome Capture Method.
findings: []
- id: PMID:32573848
title: AtHsc70-1 negatively regulates the basal heat tolerance in Arabidopsis
thaliana through affecting the activity of HsfAs and Hsp101.
findings: []