PAD4

UniProt ID: Q9S745
Organism: Arabidopsis thaliana
Review Status: COMPLETE
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Gene Description

PAD4 is an Arabidopsis EDS1-family, lipase-like immune signaling regulator. It forms EDS1-PAD4 complexes in nucleus and cytoplasm, amplifies salicylic-acid-associated defense programs, and contributes to systemic acquired resistance, antibacterial defense, TIR-NLR signaling, and selected aphid, hypoxia, and leaf-abscission outputs. Despite AB-hydrolase/lipase-like domains, direct lipase activity is not established; current mechanistic evidence favors a pseudoenzymatic adaptor/scaffold role in immune signaling.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0001666 response to hypoxia
IMP
PMID:18055613
Lysigenous aerenchyma formation in Arabidopsis is controlled...
KEEP AS NON CORE
Summary: PAD4 is genetically required for hypoxia-induced lysigenous aerenchyma and associated ROS signaling in the cited study.
Reason: This is a real PAD4-dependent stress/developmental output, but it is downstream of the EDS1/PAD4 immune-redox signaling module rather than PAD4's core conserved role.
GO:0002213 defense response to insect
IMP
PMID:17725549
Phloem-based resistance to green peach aphid is controlled b...
KEEP AS NON CORE
Summary: PAD4 contributes to Arabidopsis defense against the green peach aphid and limits phloem feeding or aphid population growth.
Reason: The aphid-defense branch is experimentally supported and biologically important, but it is a specialized immune output rather than the central EDS1-PAD4 defense-signaling function.
GO:0009625 response to insect
IMP
PMID:16299172
Premature leaf senescence modulated by the Arabidopsis PHYTO...
KEEP AS NON CORE
Summary: PAD4 contributes to Arabidopsis defense against the green peach aphid and limits phloem feeding or aphid population growth.
Reason: The aphid-defense branch is experimentally supported and biologically important, but it is a specialized immune output rather than the central EDS1-PAD4 defense-signaling function.
GO:0009627 systemic acquired resistance
IEP
PMID:17419843
Pathogen-associated molecular pattern recognition rather tha...
ACCEPT
Summary: PAD4 is a major positive regulator of salicylic-acid-associated systemic acquired resistance and defense amplification.
Reason: PAD4 was cloned and characterized as required for SA accumulation/signaling and systemic resistance outputs, and later work places it in the EDS1-PAD4 immune signaling branch.
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
TAS
PMID:10557364
Arabidopsis thaliana PAD4 encodes a lipase-like gene that is...
ACCEPT
Summary: PAD4 is a major positive regulator of salicylic-acid-associated systemic acquired resistance and defense amplification.
Reason: PAD4 was cloned and characterized as required for SA accumulation/signaling and systemic resistance outputs, and later work places it in the EDS1-PAD4 immune signaling branch.
Supporting Evidence:
PMID:10557364
PAD4 participates in a positive regulatory loop that increases SA levels, thereby activating SA-dependent defense responses
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
IMP
PMID:11574472
Direct interaction between the Arabidopsis disease resistanc...
ACCEPT
Summary: PAD4 is a major positive regulator of salicylic-acid-associated systemic acquired resistance and defense amplification.
Reason: PAD4 was cloned and characterized as required for SA accumulation/signaling and systemic resistance outputs, and later work places it in the EDS1-PAD4 immune signaling branch.
Supporting Evidence:
PMID:11574472
EDS1 and PAD4 are both required for accumulation of the plant defence-potentiating molecule, salicylic acid
GO:0010150 leaf senescence
IMP
PMID:16299172
Premature leaf senescence modulated by the Arabidopsis PHYTO...
KEEP AS NON CORE
Summary: PAD4 modulates premature leaf senescence induced by aphid feeding.
Reason: This senescence annotation is supported in the aphid-defense context, but senescence is a downstream defense strategy rather than the core molecular role of PAD4.
GO:0010310 regulation of hydrogen peroxide metabolic process
IMP
PMID:18055613
Lysigenous aerenchyma formation in Arabidopsis is controlled...
KEEP AS NON CORE
Summary: PAD4 is genetically required for hypoxia-induced lysigenous aerenchyma and associated ROS signaling in the cited study.
Reason: This is a real PAD4-dependent stress/developmental output, but it is downstream of the EDS1/PAD4 immune-redox signaling module rather than PAD4's core conserved role.
GO:0010618 aerenchyma formation
IMP
PMID:18055613
Lysigenous aerenchyma formation in Arabidopsis is controlled...
KEEP AS NON CORE
Summary: PAD4 is genetically required for hypoxia-induced lysigenous aerenchyma and associated ROS signaling in the cited study.
Reason: This is a real PAD4-dependent stress/developmental output, but it is downstream of the EDS1/PAD4 immune-redox signaling module rather than PAD4's core conserved role.
GO:0031348 negative regulation of defense response
IMP
PMID:16732289
Conserved requirement for a plant host cell protein in powde...
REMOVE
Summary: The cached text for the cited powdery-mildew MLO paper does not provide PAD4-specific support for negative regulation of defense response.
Reason: PAD4 is predominantly a positive immune regulator; this citation does not substantiate PAD4 as a negative regulator of defense response.
GO:0042742 defense response to bacterium
IMP
PMID:9136026
Phytoalexin-deficient mutants of Arabidopsis reveal that PAD...
ACCEPT
Summary: PAD4 positively regulates antibacterial defense, especially against Pseudomonas-associated disease contexts.
Reason: Defense response to bacterium is a central biological process output of the EDS1-PAD4 immune signaling module.
GO:0050829 defense response to Gram-negative bacterium
IMP
PMID:29253890
Leaf shedding as an anti-bacterial defense in Arabidopsis ca...
ACCEPT
Summary: PAD4 positively regulates antibacterial defense, especially against Pseudomonas-associated disease contexts.
Reason: Defense response to bacterium is a central biological process output of the EDS1-PAD4 immune signaling module.
Supporting Evidence:
PMID:29253890
pad4, eds1, and pad4 sag101 (SENESCENCE-ASSOCIATED GENE 101) mutants also had quantitatively impaired abscission
GO:0051707 response to other organism
IEP
PMID:16531493
Salicylic acid-independent ENHANCED DISEASE SUSCEPTIBILITY1 ...
MODIFY
Summary: The cited expression-genomics study supports PAD4-dependent defense signaling after pathogen challenge, not a generic response to other organism.
Reason: Replace the broad response-to-organism term with antibacterial defense regulation, which better captures PAD4 function.
GO:0060866 leaf abscission
IMP
PMID:29253890
Leaf shedding as an anti-bacterial defense in Arabidopsis ca...
KEEP AS NON CORE
Summary: PAD4 is required for normal pathogen-triggered cauline leaf abscission in a bacterial defense context.
Reason: The leaf-abscission phenotype is a tissue-level immune output mediated through salicylic-acid defense signaling, not a direct molecular function of PAD4.
GO:0005515 protein binding
IPI
PMID:11574472
Direct interaction between the Arabidopsis disease resistanc...
MARK AS OVER ANNOTATED
Summary: PAD4 physically interacts with EDS1 in immune signaling contexts, but generic protein binding does not describe the functional role.
Reason: The informative curation is EDS1 disease-resistance complex membership and signaling adaptor activity; protein binding alone is too generic for a core annotation.
GO:0005515 protein binding
IPI
PMID:16040633
Arabidopsis SENESCENCE-ASSOCIATED GENE101 stabilizes and sig...
MARK AS OVER ANNOTATED
Summary: PAD4 physically interacts with EDS1 in immune signaling contexts, but generic protein binding does not describe the functional role.
Reason: The informative curation is EDS1 disease-resistance complex membership and signaling adaptor activity; protein binding alone is too generic for a core annotation.
GO:0005515 protein binding
IPI
PMID:21434927
Different roles of Enhanced Disease Susceptibility1 (EDS1) b...
MARK AS OVER ANNOTATED
Summary: PAD4 physically interacts with EDS1 in immune signaling contexts, but generic protein binding does not describe the functional role.
Reason: The informative curation is EDS1 disease-resistance complex membership and signaling adaptor activity; protein binding alone is too generic for a core annotation.
GO:0005515 protein binding
IPI
PMID:23275581
Natural variation in small molecule-induced TIR-NB-LRR signa...
MARK AS OVER ANNOTATED
Summary: PAD4 physically interacts with VICTR/TIR-NLR immune components in immune signaling contexts, but generic protein binding does not describe the functional role.
Reason: The informative curation is EDS1 disease-resistance complex membership and signaling adaptor activity; protein binding alone is too generic for a core annotation.
GO:0005515 protein binding
IPI
PMID:28555890
The dual role of LESION SIMULATING DISEASE 1 as a condition-...
MARK AS OVER ANNOTATED
Summary: This source is a broad LSD1 interaction/scaffold study with a GOA/IntAct PAD4-EDS1 IPI row, but generic protein binding does not describe PAD4's functional role.
Reason: The informative curation is EDS1 disease-resistance complex membership and signaling adaptor activity; protein binding alone is too generic for a core annotation.
GO:0016298 lipase activity
ISS
PMID:10557364
Arabidopsis thaliana PAD4 encodes a lipase-like gene that is...
REMOVE
Summary: PAD4 was initially annotated as lipase-like from sequence similarity, but no direct PAD4 lipase activity has been demonstrated.
Reason: The cited paper describes predicted similarity to triacylglycerol lipases and explicitly leaves substrate/activity uncertain; later evidence favors pseudoenzymatic immune signaling.
GO:0006629 lipid metabolic process
IEA
GO_REF:0000002
REMOVE
Summary: The InterPro lipid metabolic process transfer follows from a lipase-like domain but is not supported by PAD4 biology.
Reason: PAD4 is an EDS1-family immune signaling protein; no direct lipid metabolic process or lipid substrate is established.
GO:0009617 response to bacterium
IDA
PMID:10557364
Arabidopsis thaliana PAD4 encodes a lipase-like gene that is...
MODIFY
Summary: The cited PAD4 cloning paper supports antibacterial defense regulation, but response to bacterium is broader than the curated PAD4 role.
Reason: Use a defense-response term that captures PAD4 as a positive immune regulator rather than a generic response term.
GO:0009625 response to insect
IDA
PMID:21426427
TREHALOSE PHOSPHATE SYNTHASE11-dependent trehalose metabolis...
KEEP AS NON CORE
Summary: PAD4 contributes to Arabidopsis defense against the green peach aphid and limits phloem feeding or aphid population growth.
Reason: The aphid-defense branch is experimentally supported and biologically important, but it is a specialized immune output rather than the central EDS1-PAD4 defense-signaling function.
GO:0009626 plant-type hypersensitive response
IMP
PMID:16040633
Arabidopsis SENESCENCE-ASSOCIATED GENE101 stabilizes and sig...
KEEP AS NON CORE
Summary: PAD4 contributes to some TIR-NLR/EDS1-dependent hypersensitive-response and cell-death outputs.
Reason: Hypersensitive response is a pathway output of immune signaling; PAD4 is not the dedicated cell-death effector and contemporary models separate the EDS1-PAD4 branch from the EDS1-SAG101-NRG1 cell-death branch.
GO:0009626 plant-type hypersensitive response
IMP
PMID:19616764
Regulation of cell death and innate immunity by two receptor...
KEEP AS NON CORE
Summary: PAD4 contributes to some TIR-NLR/EDS1-dependent hypersensitive-response and cell-death outputs.
Reason: Hypersensitive response is a pathway output of immune signaling; PAD4 is not the dedicated cell-death effector and contemporary models separate the EDS1-PAD4 branch from the EDS1-SAG101-NRG1 cell-death branch.
GO:0009626 plant-type hypersensitive response
NAS
PMID:22072959
SAG101 forms a ternary complex with EDS1 and PAD4 and is req...
KEEP AS NON CORE
Summary: PAD4 contributes to some TIR-NLR/EDS1-dependent hypersensitive-response and cell-death outputs.
Reason: Hypersensitive response is a pathway output of immune signaling; PAD4 is not the dedicated cell-death effector and contemporary models separate the EDS1-PAD4 branch from the EDS1-SAG101-NRG1 cell-death branch.
GO:0009751 response to salicylic acid
IDA
PMID:10557364
Arabidopsis thaliana PAD4 encodes a lipase-like gene that is...
ACCEPT
Summary: PAD4 acts upstream of salicylic-acid accumulation and salicylic-acid-mediated defense signaling.
Reason: SA amplification and SA-mediated defense regulation are central outputs of PAD4 immune signaling.
Supporting Evidence:
PMID:10557364
Treatment with SA induced expression of PAD4 mRNA
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
IMP
PMID:10796016
Arabidopsis thaliana EDS4 contributes to salicylic acid (SA)...
ACCEPT
Summary: PAD4 is a major positive regulator of salicylic-acid-associated systemic acquired resistance and defense amplification.
Reason: PAD4 was cloned and characterized as required for SA accumulation/signaling and systemic resistance outputs, and later work places it in the EDS1-PAD4 immune signaling branch.
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
NAS
PMID:22072959
SAG101 forms a ternary complex with EDS1 and PAD4 and is req...
ACCEPT
Summary: PAD4 is a major positive regulator of salicylic-acid-associated systemic acquired resistance and defense amplification.
Reason: PAD4 was cloned and characterized as required for SA accumulation/signaling and systemic resistance outputs, and later work places it in the EDS1-PAD4 immune signaling branch.
Supporting Evidence:
PMID:22072959
Besides EDS1 and SA, HRT-mediated resistance also requires PAD4 and EDS5
GO:0010105 negative regulation of ethylene-activated signaling pathway
IGI
PMID:16813576
Arabidopsis MAP kinase 4 regulates salicylic acid- and jasmo...
KEEP AS NON CORE
Summary: PAD4 participates in defense hormone cross-talk involving SA, jasmonic acid, and ethylene pathways.
Reason: Hormone cross-regulation is a downstream regulatory output of PAD4/EDS1 signaling rather than PAD4's core molecular role.
GO:0010225 response to UV-C
IMP
PMID:11826312
EDS5, an essential component of salicylic acid-dependent sig...
KEEP AS NON CORE
Summary: PAD4 is required for EDS5 induction after UV-C exposure in the cited defense-signaling study.
Reason: This abiotic stress annotation reflects shared defense/SA signaling circuitry and is not the central PAD4 immune-complex function.
GO:0042742 defense response to bacterium
IMP
PMID:11826312
EDS5, an essential component of salicylic acid-dependent sig...
ACCEPT
Summary: PAD4 positively regulates antibacterial defense, especially against Pseudomonas-associated disease contexts.
Reason: Defense response to bacterium is a central biological process output of the EDS1-PAD4 immune signaling module.
Supporting Evidence:
PMID:11826312
the transcript accumulation of EDS5 after exposure to UV-C light and certain pathogens depends on PAD4, EDS1, and NDR1
GO:0071327 cellular response to trehalose stimulus
IDA
PMID:21426427
TREHALOSE PHOSPHATE SYNTHASE11-dependent trehalose metabolis...
KEEP AS NON CORE
Summary: Trehalose metabolism regulates PAD4 expression during aphid defense.
Reason: This is a stimulus-response context feeding into the PAD4 aphid-defense branch, not the core EDS1-PAD4 immune signaling function.
GO:0080142 regulation of salicylic acid biosynthetic process
IMP
PMID:9634589
PAD4 functions upstream from salicylic acid to control defen...
ACCEPT
Summary: PAD4 acts upstream of salicylic-acid accumulation and salicylic-acid-mediated defense signaling.
Reason: SA amplification and SA-mediated defense regulation are central outputs of PAD4 immune signaling.
GO:0080151 positive regulation of salicylic acid mediated signaling pathway
IGI
PMID:16813576
Arabidopsis MAP kinase 4 regulates salicylic acid- and jasmo...
ACCEPT
Summary: PAD4 acts upstream of salicylic-acid accumulation and salicylic-acid-mediated defense signaling.
Reason: SA amplification and SA-mediated defense regulation are central outputs of PAD4 immune signaling.
GO:1900367 positive regulation of defense response to insect
IMP
PMID:16299172
Premature leaf senescence modulated by the Arabidopsis PHYTO...
KEEP AS NON CORE
Summary: PAD4 contributes to Arabidopsis defense against the green peach aphid and limits phloem feeding or aphid population growth.
Reason: The aphid-defense branch is experimentally supported and biologically important, but it is a specialized immune output rather than the central EDS1-PAD4 defense-signaling function.
GO:1900426 positive regulation of defense response to bacterium
IMP
PMID:10557364
Arabidopsis thaliana PAD4 encodes a lipase-like gene that is...
ACCEPT
Summary: PAD4 positively regulates antibacterial defense, especially against Pseudomonas-associated disease contexts.
Reason: Defense response to bacterium is a central biological process output of the EDS1-PAD4 immune signaling module.
Supporting Evidence:
PMID:10557364
PAD4 participates in a positive regulatory loop that increases SA levels, thereby activating SA-dependent defense responses
GO:1900426 positive regulation of defense response to bacterium
IMP
PMID:9634589
PAD4 functions upstream from salicylic acid to control defen...
ACCEPT
Summary: PAD4 positively regulates antibacterial defense, especially against Pseudomonas-associated disease contexts.
Reason: Defense response to bacterium is a central biological process output of the EDS1-PAD4 immune signaling module.
GO:1901183 positive regulation of camalexin biosynthetic process
IMP
PMID:10557364
Arabidopsis thaliana PAD4 encodes a lipase-like gene that is...
KEEP AS NON CORE
Summary: PAD4 positively regulates camalexin accumulation after pathogen infection.
Reason: Camalexin biosynthesis is a supported defense output, but PAD4 is not itself a camalexin biosynthetic enzyme.
GO:2000022 regulation of jasmonic acid mediated signaling pathway
IGI
PMID:16813576
Arabidopsis MAP kinase 4 regulates salicylic acid- and jasmo...
KEEP AS NON CORE
Summary: PAD4 participates in defense hormone cross-talk involving SA, jasmonic acid, and ethylene pathways.
Reason: Hormone cross-regulation is a downstream regulatory output of PAD4/EDS1 signaling rather than PAD4's core molecular role.
GO:2000031 regulation of salicylic acid mediated signaling pathway
IMP
PMID:10796016
Arabidopsis thaliana EDS4 contributes to salicylic acid (SA)...
ACCEPT
Summary: PAD4 acts upstream of salicylic-acid accumulation and salicylic-acid-mediated defense signaling.
Reason: SA amplification and SA-mediated defense regulation are central outputs of PAD4 immune signaling.
GO:0005634 nucleus
IEA
GO_REF:0000044
ACCEPT
Summary: PAD4-containing EDS1 complexes are supported in the nucleus and cytoplasm.
Reason: Subcellular localization is experimentally supported for EDS1-PAD4 complexes and is consistent with nucleo-cytoplasmic immune signal relay.
GO:0005634 nucleus
ISM
GO_REF:0000122
ACCEPT
Summary: PAD4-containing EDS1 complexes are supported in the nucleus and cytoplasm.
Reason: Subcellular localization is experimentally supported for EDS1-PAD4 complexes and is consistent with nucleo-cytoplasmic immune signal relay.
GO:0005634 nucleus
IDA
PMID:16040633
Arabidopsis SENESCENCE-ASSOCIATED GENE101 stabilizes and sig...
ACCEPT
Summary: PAD4-containing EDS1 complexes are supported in the nucleus and cytoplasm.
Reason: Subcellular localization is experimentally supported for EDS1-PAD4 complexes and is consistent with nucleo-cytoplasmic immune signal relay.
Supporting Evidence:
PMID:16040633
EDS1 and PAD4 localized to the cytosol and nucleus, whereas SAG101 was detected only in the nuclear compartment
GO:0005634 nucleus
IDA
PMID:22072959
SAG101 forms a ternary complex with EDS1 and PAD4 and is req...
ACCEPT
Summary: PAD4-containing EDS1 complexes are supported in the nucleus and cytoplasm.
Reason: Subcellular localization is experimentally supported for EDS1-PAD4 complexes and is consistent with nucleo-cytoplasmic immune signal relay.
Supporting Evidence:
PMID:22072959
EDS1 and PAD4 are present in the nucleus and cytoplasm, whereas SAG101 preferentially localizes to the nucleus
GO:0005634 nucleus
NAS
PMID:22072959
SAG101 forms a ternary complex with EDS1 and PAD4 and is req...
ACCEPT
Summary: PAD4-containing EDS1 complexes are supported in the nucleus and cytoplasm.
Reason: Subcellular localization is experimentally supported for EDS1-PAD4 complexes and is consistent with nucleo-cytoplasmic immune signal relay.
Supporting Evidence:
PMID:22072959
EDS1 and PAD4 are present in the nucleus and cytoplasm, whereas SAG101 preferentially localizes to the nucleus
GO:0005737 cytoplasm
IEA
GO_REF:0000044
ACCEPT
Summary: PAD4-containing EDS1 complexes are supported in the nucleus and cytoplasm.
Reason: Subcellular localization is experimentally supported for EDS1-PAD4 complexes and is consistent with nucleo-cytoplasmic immune signal relay.
GO:0005737 cytoplasm
IDA
PMID:16040633
Arabidopsis SENESCENCE-ASSOCIATED GENE101 stabilizes and sig...
ACCEPT
Summary: PAD4-containing EDS1 complexes are supported in the nucleus and cytoplasm.
Reason: Subcellular localization is experimentally supported for EDS1-PAD4 complexes and is consistent with nucleo-cytoplasmic immune signal relay.
Supporting Evidence:
PMID:16040633
EDS1 and PAD4 localized to the cytosol and nucleus, whereas SAG101 was detected only in the nuclear compartment
GO:0005829 cytosol
IDA
PMID:16040633
Arabidopsis SENESCENCE-ASSOCIATED GENE101 stabilizes and sig...
ACCEPT
Summary: PAD4-containing EDS1 complexes are supported in the cytosol/cytoplasmic fraction.
Reason: Subcellular localization is experimentally supported for EDS1-PAD4 complexes and is consistent with nucleo-cytoplasmic immune signal relay.
Supporting Evidence:
PMID:16040633
EDS1 and PAD4 localized to the cytosol and nucleus, whereas SAG101 was detected only in the nuclear compartment
GO:0106093 EDS1 disease-resistance complex
IDA
PMID:11574472
Direct interaction between the Arabidopsis disease resistanc...
ACCEPT
Summary: PAD4 is a component of the EDS1 disease-resistance complex.
Reason: EDS1-PAD4 complex membership is the best-supported cellular component annotation for PAD4 and reflects its core immune signaling role.
Supporting Evidence:
PMID:11574472
Co-immunoprecipitation experiments show that EDS1 and PAD4 proteins interact in healthy and pathogen-challenged plant cells
GO:0106093 EDS1 disease-resistance complex
NAS
PMID:22072959
SAG101 forms a ternary complex with EDS1 and PAD4 and is req...
ACCEPT
Summary: PAD4 is a component of the EDS1 disease-resistance complex.
Reason: EDS1-PAD4 complex membership is the best-supported cellular component annotation for PAD4 and reflects its core immune signaling role.
Supporting Evidence:
PMID:22072959
SAG101 forms a ternary complex with EDS1 and PAD4 and is required for resistance signaling against turnip crinkle virus
GO:0035591 signaling adaptor activity
IC
file:ARATH/PAD4/PAD4-deep-research-falcon.md
NEW
Summary: PAD4 functions as a ligand-responsive EDS1-family immune signaling adaptor/scaffold rather than as a demonstrated lipase.
Reason: Existing GOA rows capture EDS1 complex membership and defense outputs but not PAD4's current mechanistic role in ligand-responsive immune signal relay to ADR1-family helper NLRs.
Supporting Evidence:
file:ARATH/PAD4/PAD4-deep-research-falcon.md
PAD4 forms an EDS1-PAD4 heterodimer that serves as a ligand-enabled receptor/scaffold for ADR1
file:ARATH/PAD4/PAD4-deep-research-falcon.md
EDS1–PAD4–ADR1 heterotrimer bound to **pRib-ADP**
PMID:11574472
EDS1 and PAD4 proteins interact in healthy and pathogen-challenged plant cells
PMID:16040633
dynamic interactions of EDS1 and its signaling partners in multiple cell compartments are important for plant defense signal relay
PMID:22072959
Co-IP of EDS1-90-MYC and PAD4-MYC with EDS1-80-FLAG

Core Functions

Ligand-responsive EDS1-PAD4 immune signaling adaptor. PAD4 forms an EDS1-PAD4 complex that amplifies salicylic-acid-associated antibacterial and systemic defense programs and, in current mechanistic models, helps connect TIR-derived immune signals to ADR1-family helper NLR activation.

Supporting Evidence:
  • file:ARATH/PAD4/PAD4-deep-research-falcon.md
    PAD4 forms an EDS1-PAD4 heterodimer that serves as a ligand-enabled receptor/scaffold for ADR1
  • file:ARATH/PAD4/PAD4-deep-research-falcon.md
    EDS1–PAD4–ADR1 heterotrimer bound to **pRib-ADP**
  • PMID:11574472
    EDS1 and PAD4 proteins interact in healthy and pathogen-challenged plant cells
  • file:ARATH/PAD4/PAD4-deep-research-falcon.md
    PAD4 promotes defense transcriptional reprogramming and salicylic-acid-associated immunity rather than acting as the dedicated cell-death branch

References

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Suggested Questions for Experts

Q: Should GO add a more specific molecular function term for ligand-responsive EDS1-family immune adaptor activity, distinct from generic protein-containing complex binding?

Q: Should older PAD4 lipase-activity annotations be retired or replaced systematically for EDS1-family proteins unless direct hydrolase activity is demonstrated?

Suggested Experiments

Experiment: Reconstitute Arabidopsis EDS1-PAD4 with candidate TIR-derived nucleotide ligands and ADR1-family helper NLRs to quantify PAD4-dependent complex assembly and signaling output.

Experiment: Test purified PAD4 and EDS1-PAD4 complexes against lipid and ester substrates alongside catalytic-site mutants to determine whether any physiologically relevant hydrolase activity exists.

Deep Research

Falcon

(PAD4-deep-research-falcon.md)

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