TODO: Add description for P10930
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
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GO:0019062
virion attachment to host cell
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IEA
GO_REF:0000043 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0046718
symbiont entry into host cell
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IEA
GO_REF:0000043 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0046872
metal ion binding
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IEA
GO_REF:0000002 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0098015
virus tail
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IEA
GO_REF:0000043 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0098024
virus tail, fiber
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IEA
GO_REF:0000120 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0098670
entry receptor-mediated virion attachment to host cell
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IEA
GO_REF:0000043 |
PENDING |
Summary: TODO: Review this GOA annotation
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GO:0098025
virus tail, baseplate
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IDA
PMID:27193680 Structure of the T4 baseplate and its function in triggering... |
PENDING |
Summary: TODO: Review this GOA annotation
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The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
The target described in UniProt (P10930) is gene product 12 (gp12) from Enterobacteria phage T4, annotated as the short tail fiber protein. Across structural and mechanistic literature, “gene 12 / gp12” in T4 consistently refers to the baseplate-anchored short tail fiber (STF) that participates in adsorption to Gram-negative hosts by binding lipopolysaccharide (LPS) core structures and is trimeric. This matches the UniProt-provided family/domain context (tevenvirinae STF; “Short_tail_fibre_C” etc.). (thomassen2003thestructureof pages 1-2, raaij2001crystalstructureof pages 1-2, leiman2010morphogenesisofthe pages 2-5)
Limitation: within the retrieved full text, the UniProt accession P10930 is not explicitly mentioned, so the UniProt↔literature mapping is supported by concordant name/organism/function/domain evidence rather than an explicit accession cross-reference. (thomassen2003thestructureof pages 1-2, leiman2010morphogenesisofthe pages 2-5)
In T4-like myophages, adsorption is commonly conceptualized as a two-stage process: initial, reversible surface engagement (often dominated by long tail fibers) followed by an irreversible (or pseudo-irreversible) commitment step mediated by short tail fibers. In contemporary terminology, gp12 forms the STF and is the component responsible for pseudo-irreversible binding to a secondary receptor such as LPS. (kleinsousa2024towardsacomplete pages 1-4, mourosi2022understandingbacteriophagetail pages 9-11)
RBPs are the virion components that contact host receptors (outer membrane proteins, glycans/exopolysaccharides, flagella). Tail fibers/spikes are prominent RBPs. Modern work emphasizes modularity of RBPs (N-terminal attachment modules + C-terminal receptor-recognition modules), which underpins host-range evolution and engineering. (kleinsousa2024towardsacomplete pages 1-4)
The term reflects that adsorption can be extremely stable due to multivalency (multiple binding sites per fiber and multiple fibers per virion), even if individual interactions may be reversible. A structure-based model for gp12 proposes multiple LPS-binding grooves per trimer, and six STF trimers per phage increases avidity, shifting the overall interaction to quasi-irreversible. (thomassen2003thestructureof pages 5-7, leiman2010morphogenesisofthe pages 2-5)
gp12 forms the short tail fibers of bacteriophage T4 and mediates irreversible binding to the host by binding the core region of Escherichia coli LPS. This is explicitly stated in primary structural papers on gp12 receptor-binding domains. (thomassen2003thestructureof pages 1-2, raaij2001crystalstructureof pages 1-2)
A mechanistic model for T4 infection initiation describes how, after long-tail-fiber-mediated receptor searching and transmission of a mechanical signal to the baseplate, short tail fibers are unpinned, rotate downward, and irreversibly bind the lipid A–inner core region of LPS; this anchoring is coupled to baseplate rearrangements that enable tail sheath contraction and genome delivery. (mourosi2022understandingbacteriophagetail pages 9-11)
Across sources, receptor binding is consistently localized to LPS core structures, with some sources phrasing the bound epitope as “core region of LPS” and others specifying “lipid A–inner core region.” (thomassen2003thestructureof pages 1-2, raaij2001crystalstructureof pages 1-2, mourosi2022understandingbacteriophagetail pages 9-11)
A 2024 preprint summarizing tail-fiber diversity explicitly identifies T4 gp12 STF as responsible for pseudo-irreversible binding to LPS as a secondary receptor. (kleinsousa2024towardsacomplete pages 1-4)
gp12 is part of the T4 tail baseplate apparatus, localized at the baseplate outer rim, with 18 copies per tail (6 STF trimers). (leiman2010morphogenesisofthe pages 2-5)
Short tail fibers are parallel homotrimers. Structural reviews describe that gp12 N-termini attach to gp10 trimers in the baseplate, while gp11 trimers hold the short tail fibers at a hinge roughly halfway along the fiber—placing gp12 within a defined baseplate attachment/hinge architecture. (hyman2018bacteriophaget4long pages 6-7)
Multiple sources describe gp12 as a parallel, in-register homotrimer with 527 residues per subunit. (hyman2018bacteriophaget4long pages 6-7, thomassen2003thestructureof pages 1-2, raaij2001crystalstructureof pages 1-2)
Leiman et al. summarize gp12 as ~55.3 kDa per monomer, trimeric, with 18 copies per tail. (leiman2010morphogenesisofthe pages 2-5)
Primary X-ray crystallography of gp12 fragments established that the short tail fiber contains a right-handed triple-stranded β-helix and a C-terminal globular receptor-binding region. (raaij2001crystalstructureof pages 1-2, thomassen2003thestructureof pages 5-7)
A high-resolution receptor-binding domain structure (reported at 1.5 Å) reveals a knitted trimeric fold with a head/bonnet subdivision and proposes that the positively charged apex and grooves lined with aromatic/basic residues form the LPS-binding surface(s). (thomassen2003thestructureof pages 1-2, thomassen2003thestructureof pages 5-7)
Earlier crystallography of a protease-stable domain (reported at 1.9 Å) likewise supports a β-helix + β-sandwich/globular organization consistent with a robust, inextensible fiber tip used for stable anchoring. (raaij2001crystalstructureof pages 1-2)
The receptor-binding domain structure contains a Zn2+ ion coordinated octahedrally by six histidines—specifically His445 and His447 from each monomer—forming an unusual metal-binding site at the interface of receptor-binding subdomains. (thomassen2003thestructureof pages 5-7, leiman2010morphogenesisofthe pages 7-8)
A tail morphogenesis review lists gp12 structures corresponding to PDB 1H6W and 1OCY, and the 2003 receptor-binding domain work explicitly associates 1H6W with a gp12 fragment. (thomassen2003thestructureof pages 1-2, leiman2010morphogenesisofthe pages 2-5)
gp12 folding/trimerization is chaperone-dependent: sources describe that gp12 trimers require the chaperone gp57 (gp57A) for folding and proper trimer formation and that full-length gp12 aggregates readily without appropriate assisted folding. (leiman2010morphogenesisofthe pages 7-8, miernikiewicz2016t4phagetail pages 6-7)
This chaperone dependence has practical implications: recombinant production of functional gp12 generally includes co-expression with gp57. (miernikiewicz2016t4phagetail pages 6-7, miernikiewicz2016t4phagetail pages 3-6)
gp12 is not an enzyme catalyzing a chemical transformation; rather, it is a structural adhesin/RBP acting in the adsorption and entry pathway. The mechanistic pathway is: reversible sampling → baseplate triggering → STF deployment/rotation → stable LPS-core anchoring → tail contraction/genome injection. (mourosi2022understandingbacteriophagetail pages 9-11)
A 2024 bioRxiv preprint introduces RBPseg, a segmentation/assembly strategy leveraging modern deep-learning structure prediction (ESMFold + AlphaFold2-multimer), and uses T4 as a canonical example with two tail-fiber sets, explicitly noting gp12 STFs as responsible for pseudo-irreversible LPS binding. This exemplifies current trends: integrating predictive models with targeted cryo-EM to build comprehensive tail-fiber structural atlases and to support RBP engineering. (kleinsousa2024towardsacomplete pages 1-4)
A 2023 study of a T-even-like myovirus (CkP1) reiterates the adsorption framework in which irreversible binding is mediated by short tail fibers, while reversible binding by long tail fibers plays a major role in defining host range. This is representative of how T4’s adsorption logic continues to guide interpretation and engineering of related phages. (oliveira2023ckp1bacteriophagea pages 1-2)
A peer-reviewed 2016 study produced recombinant gp12 (with chaperone gp57), demonstrated it forms trimers and binds LPS in vitro, and tested it in mice as a modulator of LPS-induced inflammation. This is a direct real-world translational direction: using a phage adhesin as a selective LPS-binding/sequestering agent rather than as a whole phage therapeutic. (miernikiewicz2016t4phagetail pages 6-7, miernikiewicz2016t4phagetail pages 3-6)
Modern RBP-focused engineering emphasizes modularity and the ability to build chimeric RBPs by swapping domains at defined “hotspots.” T4 gp12 is frequently used as a canonical STF reference in discussions of tail-fiber architecture and receptor selection, supporting its relevance as a scaffold or comparative template for host-range engineering (even if gp12 itself is often the secondary-receptor adhesin rather than the primary host-range determinant). (kleinsousa2024towardsacomplete pages 1-4, mourosi2022understandingbacteriophagetail pages 9-11)
Contemporary work on tail fibers as receptor binders demonstrates that isolated tail fibers can bind LPS with high affinity and can be proposed as detection reagents. While this is shown in 2023 for another myovirus tail fiber, it reinforces why gp12-like fibers are actively considered for diagnostic capture/decoration strategies: strong, selective binding to conserved bacterial surface glycans. (oliveira2023ckp1bacteriophagea pages 1-2)
The 2003 JMB receptor-binding domain structure proposes that grooves at the positively charged trimer apex form binding sites for LPS molecules and that multivalent binding (three sites per trimer, many trimers per virion) can explain quasi-irreversible adsorption—an interpretation that remains consistent with contemporary “pseudo-irreversible” language. (thomassen2003thestructureof pages 5-7, kleinsousa2024towardsacomplete pages 1-4)
The 2022 IJMS review provides a detailed conformational/mechanical model: after LTF-mediated probing, baseplate switching triggers STF deployment and LPS-core binding, which then aligns the baseplate and triggers downstream contraction and genome ejection. This represents a current synthesis of structural and single-particle observations into an actionable model for engineering receptor usage. (mourosi2022understandingbacteriophagetail pages 9-11)
Dynamic light scattering showed gp12 alone ~51 nm, LPS alone ~95.45 nm, and the gp12+LPS mixture forming large complexes averaging ~1980 nm within minutes and stabilizing near ~2000 nm after ~45 min. (miernikiewicz2016t4phagetail pages 3-6)
With LPS challenge (1 mg/kg) and immediate gp12 treatment (100 µg/mouse), serum cytokines were reduced: IL-1α decreased by 72% at 7 h (p=0.002) and IL-6 decreased by 48% at 3 h (p=0.001), with cytokines normalizing by 24 h; histology supported reduced inflammatory infiltrates in multiple organs. (miernikiewicz2016t4phagetail pages 6-7)
The following table provides a compact, citation-linked map of gp12 functional annotation, evidence type, quantitative data, and recent (2023–2024) developments.
| Functional aspect | Key findings | Evidence type | Primary supporting citations with year/URL |
|---|---|---|---|
| Adsorption role | • gp12 is the T4 short tail fiber (STF) that mediates the irreversible or pseudo-irreversible adsorption step after long-tail-fiber sampling • STF engagement anchors the baseplate for downstream sheath contraction and DNA delivery (mourosi2022understandingbacteriophagetail pages 9-11, kleinsousa2024towardsacomplete pages 1-4) | Review/mechanistic model; comparative structural review | Mourosi et al., 2022, https://doi.org/10.3390/ijms232012146; Klein-Sousa et al., 2024, https://doi.org/10.1101/2024.10.28.620165 |
| Receptor specificity | • gp12 binds the core region of E. coli LPS • authoritative reviews/primary studies variously localize this to the lipid A–inner core region, the inner core/heptose region, or broadly the LPS core/outer-core interface, indicating consensus on core-LPS targeting but some wording differences across sources (thomassen2003thestructureof pages 1-2, raaij2001crystalstructureof pages 1-2, mourosi2022understandingbacteriophagetail pages 9-11) | X-ray structure paper context; genome/review synthesis; mechanistic review | Thomassen et al., 2003, https://doi.org/10.1016/S0022-2836(03)00755-1; van Raaij et al., 2001, https://doi.org/10.1006/jmbi.2000.5204; Mourosi et al., 2022, https://doi.org/10.3390/ijms232012146 |
| Structural organization | • gp12 is a parallel, in-register homotrimer • each monomer is 527 aa (~55.3 kDa) • there are 18 gp12 subunits per virion tail (6 STF trimers) (hyman2018bacteriophaget4long pages 6-7, thomassen2003thestructureof pages 1-2, leiman2010morphogenesisofthe pages 2-5) | X-ray structure; tail morphogenesis review | Hyman & van Raaij, 2018, https://doi.org/10.1007/s12551-017-0348-5; Thomassen et al., 2003, https://doi.org/10.1016/S0022-2836(03)00755-1; Leiman et al., 2010, https://doi.org/10.1186/1743-422X-7-355 |
| Domain architecture and receptor-binding fold | • C-terminal receptor-binding domain includes head and bonnet subdomains • central right-handed triple-stranded β-helix plus a knitted globular C-terminal domain • trimer buries ~7400 Ų total (~60% of monomer surface) (thomassen2003thestructureof pages 1-2, thomassen2003thestructureof pages 5-7, leiman2010morphogenesisofthe pages 7-8) | X-ray crystallography | Thomassen et al., 2003, https://doi.org/10.1016/S0022-2836(03)00755-1; van Raaij et al., 2001, https://doi.org/10.1006/jmbi.2000.5204 |
| Metal binding | • gp12 contains a Zn-binding site in the C-terminal domain • Zn2+ is coordinated octahedrally by His445 and His447 from each of the three protomers • this unusual metallocenter likely stabilizes the trimeric receptor-binding tip (thomassen2003thestructureof pages 1-2, thomassen2003thestructureof pages 5-7, leiman2010morphogenesisofthe pages 7-8) | X-ray crystallography; structural interpretation | Thomassen et al., 2003, https://doi.org/10.1016/S0022-2836(03)00755-1; Leiman et al., 2010, https://doi.org/10.1186/1743-422X-7-355 |
| Structural resources | • experimentally determined gp12 fragments are represented by PDB entries 1H6W and 1OCY • the 2003 structure paper explicitly links 1H6W to a 33-kDa C-terminal fragment (thomassen2003thestructureof pages 1-2, leiman2010morphogenesisofthe pages 2-5) | X-ray structure; database-linked structural review | Thomassen et al., 2003, https://doi.org/10.1016/S0022-2836(03)00755-1; Leiman et al., 2010, https://doi.org/10.1186/1743-422X-7-355 |
| Assembly/localization in the virion | • gp12 N-termini attach to gp10 trimers in the T4 baseplate • gp11 trimers hold gp12 at a hinge about halfway along the fiber • gp12 localizes to the outer rim of the baseplate and is added late in tail assembly (hyman2018bacteriophaget4long pages 6-7, thomassen2003thestructureof pages 1-2, leiman2010morphogenesisofthe pages 2-5) | Structural review; morphogenesis review; primary crystallography context | Hyman & van Raaij, 2018, https://doi.org/10.1007/s12551-017-0348-5; Leiman et al., 2010, https://doi.org/10.1186/1743-422X-7-355; Thomassen et al., 2003, https://doi.org/10.1016/S0022-2836(03)00755-1 |
| Chaperone requirement | • proper folding/trimerization of gp12 requires the phage chaperone gp57/gp57A • full-length gp12 aggregates readily without correct assisted folding • recombinant expression with gp57 yields native-like trimers (thomassen2003thestructureof pages 1-2, leiman2010morphogenesisofthe pages 7-8, miernikiewicz2016t4phagetail pages 6-7, miernikiewicz2016t4phagetail pages 3-6) | X-ray structure context; biochemical expression study | Thomassen et al., 2003, https://doi.org/10.1016/S0022-2836(03)00755-1; Leiman et al., 2010, https://doi.org/10.1186/1743-422X-7-355; Miernikiewicz et al., 2016, https://doi.org/10.3389/fmicb.2016.01112 |
| Triggering mechanism during infection | • after reversible long-tail-fiber contact, a mechanical signal converts the baseplate conformation • STFs are unpinned, rotate downward, and bind LPS • this reorients the baseplate parallel to the cell surface and promotes sheath contraction/genome injection (mourosi2022understandingbacteriophagetail pages 9-11) | Mechanistic review/model | Mourosi et al., 2022, https://doi.org/10.3390/ijms232012146 |
| LPS-binding structural model | • the trimer apex is positively charged with grooves lined by aromatic/basic residues • each groove was proposed to bind one LPS molecule, with phosphates engaging basic residues and sugars contacting aromatic residues • multivalency explains quasi-irreversible adsorption (thomassen2003thestructureof pages 5-7) | X-ray structure-based binding model | Thomassen et al., 2003, https://doi.org/10.1016/S0022-2836(03)00755-1 |
| Quantitative experimental data: oligomerization and LPS complex formation | • recombinant gp12 runs as ~172.5 kDa trimer and ~57.5 kDa monomer by SDS-PAGE • DLS showed gp12 alone ~51 nm and LPS alone ~95.45 nm • mixed gp12+LPS formed complexes averaging ~1980 nm within minutes and stabilizing near ~2000 nm after ~45 min (miernikiewicz2016t4phagetail pages 6-7, miernikiewicz2016t4phagetail pages 3-6, miernikiewicz2016t4phagetail pages 2-3) | Biochemical assay (SDS-PAGE, DLS) | Miernikiewicz et al., 2016, https://doi.org/10.3389/fmicb.2016.01112 |
| Quantitative in vivo data relevant to function/application | • in LPS-challenged mice, gp12 reduced serum IL-1α by 72% at 7 h (p=0.002) • IL-6 was reduced by 48% at 3 h (p=0.001) • histopathology showed reduced inflammatory infiltrates in liver and spleen, with broader attenuation in spleen/liver/kidney/lung (miernikiewicz2016t4phagetail pages 6-7) | In vivo murine study | Miernikiewicz et al., 2016, https://doi.org/10.3389/fmicb.2016.01112 |
| Biological pathway context | • gp12 functions in the adsorption/penetration phase of the T4 infection cycle rather than as an enzyme • it acts as the secondary receptor-binding element connecting host recognition to conformational activation of the contractile tail machine (mourosi2022understandingbacteriophagetail pages 9-11) | Mechanistic review | Mourosi et al., 2022, https://doi.org/10.3390/ijms232012146 |
| Applications and engineering relevance | • recombinant gp12 can bind purified LPS and modulate LPS-induced inflammation, suggesting use as an LPS-sequestering biologic • tail fibers are major host-range determinants and attractive engineering targets for diagnostics, biocontrol, and phage therapy • gp12-like STF modules inform RBP swapping/chimera design (miernikiewicz2016t4phagetail pages 6-7, kleinsousa2024towardsacomplete pages 1-4, oliveira2023ckp1bacteriophagea pages 1-2) | Biochemical/in vivo; computational/engineering; translational review | Miernikiewicz et al., 2016, https://doi.org/10.3389/fmicb.2016.01112; Klein-Sousa et al., 2024, https://doi.org/10.1101/2024.10.28.620165; Oliveira et al., 2023, https://doi.org/10.1007/s00253-023-12547-8 |
| Recent 2023-2024 developments | • 2024 RBPseg/structure-atlas work explicitly cites T4 gp12 as the STF responsible for pseudo-irreversible LPS binding • recent RBP studies emphasize modularity, domain exchange, and structure-guided engineering of tail fibers • 2023 T-even-like phage studies continue to use the T4 STF/LTF paradigm for interpreting host-range mechanisms (kleinsousa2024towardsacomplete pages 1-4, oliveira2023ckp1bacteriophagea pages 1-2) | Computational/engineering; contemporary comparative phage biology | Klein-Sousa et al., 2024, https://doi.org/10.1101/2024.10.28.620165; Oliveira et al., 2023, https://doi.org/10.1007/s00253-023-12547-8 |
Table: This table summarizes the experimentally supported function, structure, assembly, and application relevance of Enterobacteria phage T4 gene product 12 (gp12), with emphasis on adsorption to LPS and recent 2023-2024 context. It is useful as a compact evidence map for functional annotation and literature-supported reporting.
Gene 12 (gp12; short tail fiber protein) encodes a trimeric baseplate-anchored adhesin that mediates the irreversible/pseudo-irreversible adsorption step of bacteriophage T4 by binding conserved core regions of host LPS (often described as lipid A–inner core). gp12 fibers are attached to the baseplate via gp10 and stabilized/positioned by gp11. The receptor-binding tip contains a high-resolution characterized, Zn-stabilized knitted trimeric fold (His445/His447 coordination) with a proposed multivalent LPS-binding surface. Folding requires the chaperone gp57A. gp12 acts extracellularly at the phage–bacterium interface during adsorption/entry, and recombinant gp12 retains LPS-binding activity and has been explored as an LPS-sequestering anti-inflammatory modulator in vivo. (mourosi2022understandingbacteriophagetail pages 9-11, hyman2018bacteriophaget4long pages 6-7, thomassen2003thestructureof pages 5-7, miernikiewicz2016t4phagetail pages 6-7)
References
(thomassen2003thestructureof pages 1-2): Ellen Thomassen, Gerrit Gielen, Michael Schütz, Guy Schoehn, Jan Pieter Abrahams, Stefan Miller, and Mark J. van Raaij. The structure of the receptor-binding domain of the bacteriophage t4 short tail fibre reveals a knitted trimeric metal-binding fold. Journal of molecular biology, 331 2:361-73, Aug 2003. URL: https://doi.org/10.1016/s0022-2836(03)00755-1, doi:10.1016/s0022-2836(03)00755-1. This article has 135 citations and is from a domain leading peer-reviewed journal.
(raaij2001crystalstructureof pages 1-2): Mark J van Raaij, Guy Schoehn, Martin R Burda, and Stefan Miller. Crystal structure of a heat and protease-stable part of the bacteriophage t4 short tail fibre. Journal of molecular biology, 314 5:1137-46, Dec 2001. URL: https://doi.org/10.1006/jmbi.2000.5204, doi:10.1006/jmbi.2000.5204. This article has 125 citations and is from a domain leading peer-reviewed journal.
(leiman2010morphogenesisofthe pages 2-5): Petr G Leiman, Fumio Arisaka, Mark J van Raaij, Victor A Kostyuchenko, Anastasia A Aksyuk, Shuji Kanamaru, and Michael G Rossmann. Morphogenesis of the t4 tail and tail fibers. Virology Journal, 7:355-355, Dec 2010. URL: https://doi.org/10.1186/1743-422x-7-355, doi:10.1186/1743-422x-7-355. This article has 319 citations and is from a peer-reviewed journal.
(kleinsousa2024towardsacomplete pages 1-4): Victor Klein-Sousa, Aritz Roa-Eguiara, Claudia S. Kielkopf, Nicholas Sofos, and Nicholas M. I. Taylor. Towards a complete phage tail fiber structure atlas. bioRxiv, Oct 2024. URL: https://doi.org/10.1101/2024.10.28.620165, doi:10.1101/2024.10.28.620165. This article has 2 citations.
(mourosi2022understandingbacteriophagetail pages 9-11): Jarin Taslem Mourosi, Ayobami I. Awe, Wenzheng Guo, Himanshu Batra, Harrish Ganesh, Xiaorong Wu, and Jingen Zhu. Understanding bacteriophage tail fiber interaction with host surface receptor: the key “blueprint” for reprogramming phage host range. International Journal of Molecular Sciences, 23:12146, Oct 2022. URL: https://doi.org/10.3390/ijms232012146, doi:10.3390/ijms232012146. This article has 193 citations.
(thomassen2003thestructureof pages 5-7): Ellen Thomassen, Gerrit Gielen, Michael Schütz, Guy Schoehn, Jan Pieter Abrahams, Stefan Miller, and Mark J. van Raaij. The structure of the receptor-binding domain of the bacteriophage t4 short tail fibre reveals a knitted trimeric metal-binding fold. Journal of molecular biology, 331 2:361-73, Aug 2003. URL: https://doi.org/10.1016/s0022-2836(03)00755-1, doi:10.1016/s0022-2836(03)00755-1. This article has 135 citations and is from a domain leading peer-reviewed journal.
(hyman2018bacteriophaget4long pages 6-7): Paul Hyman and Mark van Raaij. Bacteriophage t4 long tail fiber domains. Biophysical Reviews, 10:463-471, Dec 2018. URL: https://doi.org/10.1007/s12551-017-0348-5, doi:10.1007/s12551-017-0348-5. This article has 64 citations and is from a peer-reviewed journal.
(leiman2010morphogenesisofthe pages 7-8): Petr G Leiman, Fumio Arisaka, Mark J van Raaij, Victor A Kostyuchenko, Anastasia A Aksyuk, Shuji Kanamaru, and Michael G Rossmann. Morphogenesis of the t4 tail and tail fibers. Virology Journal, 7:355-355, Dec 2010. URL: https://doi.org/10.1186/1743-422x-7-355, doi:10.1186/1743-422x-7-355. This article has 319 citations and is from a peer-reviewed journal.
(miernikiewicz2016t4phagetail pages 6-7): Paulina Miernikiewicz, Anna Kłopot, Ryszard Soluch, Piotr Szkuta, Weronika Kęska, Katarzyna Hodyra-Stefaniak, Agnieszka Konopka, Marcin Nowak, Dorota Lecion, Zuzanna Kaźmierczak, Joanna Majewska, Marek Harhala, Andrzej Górski, and Krystyna Dąbrowska. T4 phage tail adhesin gp12 counteracts lps-induced inflammation in vivo. Frontiers in Microbiology, Jul 2016. URL: https://doi.org/10.3389/fmicb.2016.01112, doi:10.3389/fmicb.2016.01112. This article has 118 citations and is from a peer-reviewed journal.
(miernikiewicz2016t4phagetail pages 3-6): Paulina Miernikiewicz, Anna Kłopot, Ryszard Soluch, Piotr Szkuta, Weronika Kęska, Katarzyna Hodyra-Stefaniak, Agnieszka Konopka, Marcin Nowak, Dorota Lecion, Zuzanna Kaźmierczak, Joanna Majewska, Marek Harhala, Andrzej Górski, and Krystyna Dąbrowska. T4 phage tail adhesin gp12 counteracts lps-induced inflammation in vivo. Frontiers in Microbiology, Jul 2016. URL: https://doi.org/10.3389/fmicb.2016.01112, doi:10.3389/fmicb.2016.01112. This article has 118 citations and is from a peer-reviewed journal.
(oliveira2023ckp1bacteriophagea pages 1-2): Hugo Oliveira, Sílvio Santos, Diana P. Pires, Dimitri Boeckaerts, Graça Pinto, Rita Domingues, Jennifer Otero, Yves Briers, Rob Lavigne, Mathias Schmelcher, Andreas Dötsch, and Joana Azeredo. Ckp1 bacteriophage, a s16-like myovirus that recognizes citrobacter koseri lipopolysaccharide through its long tail fibers. Applied Microbiology and Biotechnology, 107:3621-3636, May 2023. URL: https://doi.org/10.1007/s00253-023-12547-8, doi:10.1007/s00253-023-12547-8. This article has 4 citations and is from a domain leading peer-reviewed journal.
(miernikiewicz2016t4phagetail pages 2-3): Paulina Miernikiewicz, Anna Kłopot, Ryszard Soluch, Piotr Szkuta, Weronika Kęska, Katarzyna Hodyra-Stefaniak, Agnieszka Konopka, Marcin Nowak, Dorota Lecion, Zuzanna Kaźmierczak, Joanna Majewska, Marek Harhala, Andrzej Górski, and Krystyna Dąbrowska. T4 phage tail adhesin gp12 counteracts lps-induced inflammation in vivo. Frontiers in Microbiology, Jul 2016. URL: https://doi.org/10.3389/fmicb.2016.01112, doi:10.3389/fmicb.2016.01112. This article has 118 citations and is from a peer-reviewed journal.
id: P10930
gene_symbol: P10930
product_type: PROTEIN
status: INITIALIZED
taxon:
id: NCBITaxon:10665
label: Enterobacteria phage T4
description: 'TODO: Add description for P10930'
existing_annotations:
- term:
id: GO:0019062
label: virion attachment to host cell
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0046718
label: symbiont entry into host cell
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0046872
label: metal ion binding
evidence_type: IEA
original_reference_id: GO_REF:0000002
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0098015
label: virus tail
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0098024
label: virus tail, fiber
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0098670
label: entry receptor-mediated virion attachment to host cell
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
- term:
id: GO:0098025
label: virus tail, baseplate
evidence_type: IDA
original_reference_id: PMID:27193680
review:
summary: 'TODO: Review this GOA annotation'
action: PENDING
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with GO
terms
findings: []
- id: GO_REF:0000043
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings: []
- id: PMID:27193680
title: Structure of the T4 baseplate and its function in triggering sheath contraction.
findings: []