Can f 2, a minor dog allergen: a secreted lipocalin (calycin superfamily, lipocalin family) related to mouse major urinary protein / odorant-binding lipocalins. It binds small hydrophobic odorant ligands in its beta-barrel calyx and is produced in salivary/skin secretions and shed on hair. It is recognized by IgE in a subset of dog-allergic patients.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0005576
extracellular region
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Can f 2 is a secreted lipocalin; extracellular localization is well supported.
Reason: Secretory lipocalin acting in the extracellular space.
Supporting Evidence:
file:CANLF/Canf2/Canf2-uniprot.txt
SUBCELLULAR LOCATION: Secreted
|
|
GO:0005549
odorant binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Can f 2 binds small hydrophobic odorant ligands in its lipocalin calyx, consistent with its odorant-binding-lipocalin relatives.
Reason: Phylogenetic inference matching the odorant-binding lipocalin family.
Supporting Evidence:
file:CANLF/Canf2/Canf2-uniprot.txt
Belongs to the calycin superfamily. Lipocalin family.
|
|
GO:0005549
odorant binding
|
IEA
GO_REF:0000118 |
ACCEPT |
Summary: TreeGrafter (IEA) duplicate of the odorant-binding inference.
Reason: Electronic inference matching the lipocalin odorant-binding function.
Supporting Evidence:
file:CANLF/Canf2/Canf2-uniprot.txt
Belongs to the calycin superfamily. Lipocalin family.
|
|
GO:0005576
extracellular region
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Automated subcellular-location annotation consistent with secretion.
Reason: Consistent with the secreted nature of the lipocalin.
Supporting Evidence:
file:CANLF/Canf2/Canf2-uniprot.txt
SUBCELLULAR LOCATION: Secreted
|
|
GO:0036094
small molecule binding
|
IEA
GO_REF:0000002 |
MARK AS OVER ANNOTATED |
Summary: Generic parent of the more specific odorant binding already annotated.
Reason: Uninformative broad parent; the specific odorant-binding activity is already captured.
|
Q: What specific odorant/pheromone ligand does Can f 2 carry, and in which secretion is it functionally relevant?
Experiment: Characterize ligand binding of recombinant Can f 2 by fluorescent-probe displacement against a panel of odorants/lipids and identify native co-purifying ligands by GC-MS.
Hypothesis: Can f 2 binds specific volatile odorant ligands characteristic of its lipocalin subfamily.
Type: biophysical binding assay
ALLERGENS backlog (alias Canf2). Secreted odorant-binding lipocalin. IEDB: 9 epitopes.
Curation: ACCEPT odorant binding (IBA/IEA) + extracellular region; MARK_AS_OVER_ANNOTATED
generic small molecule binding. Core: odorant binding lipocalin (characterized -> low gap).
id: O18874
gene_symbol: Canf2
product_type: PROTEIN
status: DRAFT
taxon:
id: NCBITaxon:9615
label: Canis lupus familiaris
description: >-
Can f 2, a minor dog allergen: a secreted lipocalin (calycin superfamily,
lipocalin family) related to mouse major urinary protein / odorant-binding
lipocalins. It binds small hydrophobic odorant ligands in its beta-barrel calyx
and is produced in salivary/skin secretions and shed on hair. It is recognized by
IgE in a subset of dog-allergic patients.
existing_annotations:
- term:
id: GO:0005576
label: extracellular region
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: is_active_in
review:
summary: Can f 2 is a secreted lipocalin; extracellular localization is well supported.
action: ACCEPT
reason: Secretory lipocalin acting in the extracellular space.
supported_by:
- reference_id: file:CANLF/Canf2/Canf2-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted'
- term:
id: GO:0005549
label: odorant binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: enables
review:
summary: >-
Can f 2 binds small hydrophobic odorant ligands in its lipocalin calyx,
consistent with its odorant-binding-lipocalin relatives.
action: ACCEPT
reason: Phylogenetic inference matching the odorant-binding lipocalin family.
supported_by:
- reference_id: file:CANLF/Canf2/Canf2-uniprot.txt
supporting_text: Belongs to the calycin superfamily. Lipocalin family.
- term:
id: GO:0005549
label: odorant binding
evidence_type: IEA
original_reference_id: GO_REF:0000118
qualifier: enables
review:
summary: TreeGrafter (IEA) duplicate of the odorant-binding inference.
action: ACCEPT
reason: Electronic inference matching the lipocalin odorant-binding function.
supported_by:
- reference_id: file:CANLF/Canf2/Canf2-uniprot.txt
supporting_text: Belongs to the calycin superfamily. Lipocalin family.
- term:
id: GO:0005576
label: extracellular region
evidence_type: IEA
original_reference_id: GO_REF:0000044
qualifier: located_in
review:
summary: Automated subcellular-location annotation consistent with secretion.
action: ACCEPT
reason: Consistent with the secreted nature of the lipocalin.
supported_by:
- reference_id: file:CANLF/Canf2/Canf2-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted'
- term:
id: GO:0036094
label: small molecule binding
evidence_type: IEA
original_reference_id: GO_REF:0000002
qualifier: enables
review:
summary: Generic parent of the more specific odorant binding already annotated.
action: MARK_AS_OVER_ANNOTATED
reason: Uninformative broad parent; the specific odorant-binding activity is already captured.
core_functions:
- description: >-
Secreted odorant-binding lipocalin that binds small hydrophobic odorant ligands
in its beta-barrel calyx.
molecular_function:
id: GO:0005549
label: odorant binding
supported_by:
- reference_id: file:CANLF/Canf2/Canf2-uniprot.txt
supporting_text: Belongs to the calycin superfamily. Lipocalin family.
locations:
- id: GO:0005576
label: extracellular region
proposed_new_terms: []
suggested_questions:
- question: What specific odorant/pheromone ligand does Can f 2 carry, and in which secretion is it functionally relevant?
experts: []
suggested_experiments:
- hypothesis: Can f 2 binds specific volatile odorant ligands characteristic of its lipocalin subfamily.
description: >-
Characterize ligand binding of recombinant Can f 2 by fluorescent-probe
displacement against a panel of odorants/lipids and identify native co-purifying
ligands by GC-MS.
experiment_type: biophysical binding assay
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with GO terms
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
findings: []
- id: GO_REF:0000118
title: TreeGrafter-generated GO annotations
findings: []
- id: file:CANLF/Canf2/Canf2-uniprot.txt
title: UniProt entry O18874 (Minor allergen Can f 2), Canis lupus familiaris
findings:
- statement: Can f 2 is a secreted odorant-binding lipocalin (calycin superfamily) minor dog allergen.
supporting_text: Belongs to the calycin superfamily. Lipocalin family.
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Curated UniProt record; supports secreted odorant-binding lipocalin classification.