# Public expression records: prom1a / prom1b

## ZFIN wild-type expression (curated)

### prom1a (49 records)

| Anatomy | Stage (start) | Assay | ZFIN publication |
|---|---|---|---|
| brain | Adult | Reverse transcription PCR | ZDB-PUB-100601-11 |
| central nucleus of ventral telencephalon | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| cerebellum | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| diffuse nucleus inferior lobe | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| dorsal telencephalon | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| dorsal telencephalon > proliferative region | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| dorsal thalamus | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| epiphysis | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| epiphysis | Pharyngula:Prim-25 | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| epiphysis | Pharyngula:Prim-5 | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| eye | Adult | Reverse transcription PCR | ZDB-PUB-100601-11 |
| eye | Adult | Reverse transcription PCR | ZDB-PUB-201201-3 |
| eye | Pharyngula:Prim-5 | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| facial lobe | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| forebrain > proliferative region | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| gill | Adult | Reverse transcription PCR | ZDB-PUB-100601-11 |
| hindbrain | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| hypothalamus | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| intestine | Adult | Reverse transcription PCR | ZDB-PUB-100601-11 |
| kidney | Adult | Reverse transcription PCR | ZDB-PUB-100601-11 |
| lens | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| lens | Pharyngula:Prim-25 | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| lens epithelium | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| midbrain > proliferative region | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| midbrain hindbrain boundary | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| muscle | Adult | Reverse transcription PCR | ZDB-PUB-100601-11 |
| olfactory epithelium | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| optic tectum | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| optic tectum | Pharyngula:Prim-25 | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| otic vesicle | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| otic vesicle | Pharyngula:Prim-5 | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| ovary | Adult | Reverse transcription PCR | ZDB-PUB-100601-11 |
| periventricular grey zone | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| preoptic area | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| retina | Adult | Western blot | ZDB-PUB-110407-1 |
| retinal inner nuclear layer | Adult | mRNA in situ hybridization | ZDB-PUB-110407-1 |
| retinal outer nuclear layer | Adult | mRNA in situ hybridization | ZDB-PUB-110407-1 |
| tegmentum | Pharyngula:Prim-25 | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| testis | Adult | Reverse transcription PCR | ZDB-PUB-100601-11 |
| torus longitudinalis | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| torus semicircularis | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| unspecified | Adult | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| ventral telencephalon | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| ventricular zone | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| ventricular zone | Pharyngula:Prim-25 | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| whole organism | Cleavage:4-cell | Reverse transcription PCR | ZDB-PUB-100601-11 |
| whole organism | Hatching:Long-pec | Reverse transcription PCR | ZDB-PUB-251202-10 |
| whole organism | Juvenile:Days 45-89 | Reverse transcription PCR | ZDB-PUB-190801-20 |
| whole organism | Pharyngula:Prim-5 | Reverse transcription PCR | ZDB-PUB-100601-11 |

### prom1b (34 records)

| Anatomy | Stage (start) | Assay | ZFIN publication |
|---|---|---|---|
| brain | Adult | Reverse transcription PCR | ZDB-PUB-100601-11 |
| cerebellum | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| dorsal thalamus | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| epiphysis | Pharyngula:Prim-15 | mRNA in situ hybridization | ZDB-PUB-040907-1 |
| epiphysis | Pharyngula:Prim-25 | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| epiphysis | Pharyngula:Prim-5 | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| epiphysis | Segmentation:20-25 somites | mRNA in situ hybridization | ZDB-PUB-040907-1 |
| eye | Adult | Reverse transcription PCR | ZDB-PUB-100601-11 |
| eye | Adult | Reverse transcription PCR | ZDB-PUB-201201-3 |
| facial lobe | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| griseum centrale | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| hindbrain > proliferative region | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| hypothalamus | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| optic furrow | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| otic vesicle | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| periventricular grey zone | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| preoptic area | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| retina | Adult | Western blot | ZDB-PUB-110407-1 |
| retina | Juvenile:Days 30-44 | Western blot | ZDB-PUB-190801-20 |
| retina | Pharyngula:High-pec | mRNA in situ hybridization | ZDB-PUB-040907-1 |
| retinal inner nuclear layer | Adult | mRNA in situ hybridization | ZDB-PUB-110407-1 |
| retinal inner nuclear layer | Pharyngula:High-pec | mRNA in situ hybridization | ZDB-PUB-040907-1 |
| retinal neural layer | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| retinal outer nuclear layer | Adult | mRNA in situ hybridization | ZDB-PUB-110407-1 |
| retinal pigmented epithelium | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| tegmentum | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| testis | Adult | Reverse transcription PCR | ZDB-PUB-100601-11 |
| torus semicircularis | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| unspecified | Adult | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| valvula cerebelli | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| ventral telencephalon | Adult | mRNA in situ hybridization | ZDB-PUB-130708-43 |
| ventricular zone | Hatching:Long-pec | mRNA in situ hybridization | ZDB-PUB-100601-11 |
| whole organism | Hatching:Long-pec | Reverse transcription PCR | ZDB-PUB-100601-11 |
| whole organism | Larval:Days 7-13 | Reverse transcription PCR | ZDB-PUB-190801-20 |

- Shared ZFIN anatomy terms: brain, cerebellum, dorsal thalamus, epiphysis, eye, facial lobe, hypothalamus, otic vesicle, periventricular grey zone, preoptic area, retina, retinal inner nuclear layer, retinal outer nuclear layer, tegmentum, testis, torus semicircularis, unspecified, ventral telencephalon, ventricular zone, whole organism
- prom1a only: central nucleus of ventral telencephalon, diffuse nucleus inferior lobe, dorsal telencephalon, dorsal telencephalon > proliferative region, forebrain > proliferative region, gill, hindbrain, intestine, kidney, lens, lens epithelium, midbrain > proliferative region, midbrain hindbrain boundary, muscle, olfactory epithelium, optic tectum, ovary, torus longitudinalis
- prom1b only: griseum centrale, hindbrain > proliferative region, optic furrow, retinal neural layer, retinal pigmented epithelium, valvula cerebelli

## Bgee expression calls (all data types)

### prom1a (46 calls)

| Condition | Expression score | State | Data types |
|---|---|---|---|
| eyeball of camera-type eye | 96.79 | expressed | in situ hybridization,RNA-Seq |
| retina | 96.79 | expressed | in situ hybridization,RNA-Seq |
| brain | 92.63 | expressed | in situ hybridization,RNA-Seq |
| diffuse nuclei | 87.50 | expressed | in situ hybridization |
| early embryo | 81.22 | expressed | RNA-Seq |
| blastula | 76.00 | expressed | RNA-Seq |
| mature ovarian follicle | 75.30 | expressed | RNA-Seq |
| facial lobe | 75.00 | expressed | in situ hybridization |
| periventricular grey zone | 75.00 | expressed | in situ hybridization |
| muscle tissue | 73.87 | expressed | RNA-Seq |
| bone element | 73.67 | expressed | RNA-Seq |
| pallium | 73.07 | expressed | in situ hybridization |
| larva | 71.28 | expressed | RNA-Seq |
| torus longitudinalis | 66.67 | expressed | in situ hybridization |
| outer nuclear layer of retina | 66.66 | expressed | in situ hybridization |
| dorsal thalamus | 64.99 | expressed | in situ hybridization |
| ventral part of telencephalon | 64.27 | expressed | in situ hybridization |
| swim bladder | 63.73 | expressed | RNA-Seq |
| tail | 63.72 | expressed | RNA-Seq |
| olfactory epithelium | 63.63 | expressed | in situ hybridization |
| torus semicircularis | 62.50 | expressed | in situ hybridization |
| testis | 62.06 | expressed | RNA-Seq |
| gastrula | 61.35 | expressed | RNA-Seq |
| preoptic area | 61.09 | expressed | in situ hybridization |
| inner nuclear layer of retina | 59.58 | expressed | in situ hybridization |
| head kidney | 57.95 | expressed | RNA-Seq |
| granulocyte | 57.63 | expressed | RNA-Seq |
| lens of camera-type eye | 57.53 | expressed | in situ hybridization |
| zone of skin | 57.31 | expressed | RNA-Seq |
| eye epithelium | 57.11 | expressed | in situ hybridization |
| ventricular system of central nervous system | 55.36 | expressed | in situ hybridization |
| epithalamus | 54.82 | expressed | in situ hybridization |
| cerebellum | 54.58 | expressed | in situ hybridization |
| gland of diencephalon | 54.55 | expressed | in situ hybridization |
| ventricular zone | 54.48 | expressed | in situ hybridization |
| midbrain-hindbrain boundary | 54.00 | expressed | in situ hybridization |
| ectoderm | 53.16 | expressed | in situ hybridization |
| pineal body | 53.02 | expressed | in situ hybridization |
| ear vesicle | 52.76 | expressed | in situ hybridization |
| midbrain tegmentum | 51.51 | expressed | in situ hybridization |
| central nucleus of ventral telencephalon (Danio) | 50.00 | expressed | in situ hybridization |
| epithelium of lens | 49.99 | expressed | in situ hybridization |
| spleen | 48.09 | expressed | RNA-Seq |
| heart | 46.90 | expressed | RNA-Seq |
| intestine | 42.80 | expressed | RNA-Seq |
| pharyngeal gill | 41.44 | expressed | RNA-Seq |

### prom1b (5 calls)

| Condition | Expression score | State | Data types |
|---|---|---|---|
| retina | 86.29 | expressed | Affymetrix,RNA-Seq |
| larva | 76.04 | expressed | Affymetrix,RNA-Seq |
| brain | 67.00 | expressed | Affymetrix,RNA-Seq |
| embryo | 38.01 | expressed | Affymetrix,RNA-Seq |
| bone element | 36.24 | expressed | RNA-Seq |

- Shared Bgee conditions: bone element, brain, larva, retina
- prom1a only: blastula, central nucleus of ventral telencephalon (Danio), cerebellum, diffuse nuclei, dorsal thalamus, ear vesicle, early embryo, ectoderm, epithalamus, epithelium of lens, eye epithelium, eyeball of camera-type eye, facial lobe, gastrula, gland of diencephalon, granulocyte, head kidney, heart, inner nuclear layer of retina, intestine, lens of camera-type eye, mature ovarian follicle, midbrain tegmentum, midbrain-hindbrain boundary, muscle tissue, olfactory epithelium, outer nuclear layer of retina, pallium, periventricular grey zone, pharyngeal gill, pineal body, preoptic area, spleen, swim bladder, tail, testis, torus longitudinalis, torus semicircularis, ventral part of telencephalon, ventricular system of central nervous system, ventricular zone, zone of skin
- prom1b only: embryo