TODO: Add description for K9IJK6
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0014909
smooth muscle cell migration
|
IEA
GO_REF:0000118 |
REMOVE |
Summary: TreeGrafter smooth muscle cell migration annotation lacks direct evidence for this salivary protein.
Reason: No experimental support for smooth muscle cell migration; UniProt notes a secreted plasminogen activator with caution about conserved residues.
Supporting Evidence:
file:DESRO/K9IJK6/K9IJK6-uniprot.txt
"CAUTION: Lacks conserved residue(s) required for the propagation of feature annotation."
|
|
GO:0031639
plasminogen activation
|
IEA
GO_REF:0000118 |
UNDECIDED |
Summary: Plasminogen activation is suggested computationally, but UniProt cautions that conserved residues required for feature propagation are missing.
Reason: No direct experimental evidence for plasminogen activation in this DESRO protein and UniProt flags missing conserved residues.
Supporting Evidence:
file:DESRO/K9IJK6/K9IJK6-uniprot.txt
"CAUTION: Lacks conserved residue(s) required for the propagation of feature annotation."
file:DESRO/K9IJK6/K9IJK6-deep-research-falcon.md
Tissue-type plasminogen activator (tPA) is a secreted serine protease that converts plasminogen to plasmin, the effector protease of fibrinolysis; it is strongly potentiated by fibrin binding
|
|
GO:0048008
platelet-derived growth factor receptor signaling pathway
|
IEA
GO_REF:0000118 |
REMOVE |
Summary: PDGF receptor signaling pathway annotation is an automated inference not supported by evidence for this salivary protein.
Reason: No experimental support or UniProt evidence for PDGF receptor pathway involvement in DESRO K9IJK6.
|
|
GO:0004252
serine-type endopeptidase activity
|
IEA
GO_REF:0000120 |
UNDECIDED |
Summary: Serine-type endopeptidase activity is predicted, but UniProt flags missing conserved residues for feature propagation.
Reason: Activity is inferred from EC mapping; caution indicates uncertainty about catalytic competence.
Supporting Evidence:
file:DESRO/K9IJK6/K9IJK6-uniprot.txt
"CAUTION: Lacks conserved residue(s) required for the propagation of feature annotation."
file:DESRO/K9IJK6/K9IJK6-deep-research-falcon.md
Tissue-type plasminogen activator (tPA) is a secreted serine protease that converts plasminogen to plasmin, the effector protease of fibrinolysis; it is strongly potentiated by fibrin binding
|
|
GO:0005576
extracellular region
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: Secreted protein annotation supports extracellular region localization.
Reason: UniProt indicates the protein is secreted.
Supporting Evidence:
file:DESRO/K9IJK6/K9IJK6-uniprot.txt
"SUBCELLULAR LOCATION: Secreted"
file:DESRO/K9IJK6/K9IJK6-deep-research-falcon.md
Tissue-type plasminogen activator (tPA) is a secreted serine protease that converts plasminogen to plasmin, the effector protease of fibrinolysis; it is strongly potentiated by fibrin binding
|
|
GO:0005615
extracellular space
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Secreted protein annotation supports extracellular space localization.
Reason: UniProt indicates the protein is secreted.
Supporting Evidence:
file:DESRO/K9IJK6/K9IJK6-uniprot.txt
"SUBCELLULAR LOCATION: Secreted"
file:DESRO/K9IJK6/K9IJK6-deep-research-falcon.md
Tissue-type plasminogen activator (tPA) is a secreted serine protease that converts plasminogen to plasmin, the effector protease of fibrinolysis; it is strongly potentiated by fibrin binding
|
|
GO:0006508
proteolysis
|
IEA
GO_REF:0000120 |
UNDECIDED |
Summary: Proteolysis is inferred from enzyme keywords but catalytic activity is uncertain due to UniProt caution.
Reason: No experimental evidence and UniProt flags missing conserved residues needed for confident protease annotation.
Supporting Evidence:
file:DESRO/K9IJK6/K9IJK6-uniprot.txt
"CAUTION: Lacks conserved residue(s) required for the propagation of feature annotation."
|
|
GO:0008233
peptidase activity
|
IEA
GO_REF:0000043 |
UNDECIDED |
Summary: Peptidase activity is a keyword-based inference with uncertainty about catalytic residues.
Reason: UniProt caution suggests catalytic activity may not be preserved.
Supporting Evidence:
file:DESRO/K9IJK6/K9IJK6-uniprot.txt
"CAUTION: Lacks conserved residue(s) required for the propagation of feature annotation."
|
|
GO:0008236
serine-type peptidase activity
|
IEA
GO_REF:0000043 |
UNDECIDED |
Summary: Serine-type peptidase activity is inferred but uncertain due to missing conserved residues.
Reason: UniProt caution flags lack of conserved residues required for feature propagation.
Supporting Evidence:
file:DESRO/K9IJK6/K9IJK6-uniprot.txt
"CAUTION: Lacks conserved residue(s) required for the propagation of feature annotation."
|
|
GO:0016787
hydrolase activity
|
IEA
GO_REF:0000043 |
UNDECIDED |
Summary: Hydrolase activity is a generic inference and is uncertain given UniProt caution.
Reason: No direct evidence for hydrolase activity; UniProt flags missing conserved residues.
Supporting Evidence:
file:DESRO/K9IJK6/K9IJK6-uniprot.txt
"CAUTION: Lacks conserved residue(s) required for the propagation of feature annotation."
|
|
GO:0071396
cellular response to lipid
|
IEA
GO_REF:0000117 |
REMOVE |
Summary: Cellular response to lipid is an ARBA inference with no direct evidence for this salivary protein.
Reason: No experimental support for cellular response to lipid in DESRO K9IJK6.
|
|
GO:1901701
cellular response to oxygen-containing compound
|
IEA
GO_REF:0000117 |
REMOVE |
Summary: Cellular response to oxygen-containing compound is an ARBA inference without direct evidence.
Reason: No experimental support for cellular response to oxygen-containing compound in DESRO K9IJK6.
|
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Research plan status: All objectives completed; final report below. Citations include URLs and publication dates where available. An artifact summarizing key features is embedded.
Gene/protein identity verification
- The UniProt accession K9IJK6 corresponds to a tissue-type plasminogen activator (t-PA)-like serine protease (EC 3.4.21.68) from the common vampire bat, Desmodus rotundus. Domain annotations include kringle motifs and a Peptidase S1 (trypsin-like) catalytic domain, aligning with canonical mammalian tPA family architecture and vampire-bat tPA orthologs (desmoteplase/DSPA) (hazare2024diverseoriginsof pages 6-7, hazare2024diverseoriginsof pages 5-6).
- Literature on vampire bat salivary plasminogen activators (DSPA) confirms the organism and protein family context for a bat tPA ortholog and supports kringle-containing, S1 peptidase architecture (medcalf2012desmoteplasediscoveryinsights pages 2-3, medcalf2012desmoteplasediscoveryinsights pages 5-7).
Key concepts and definitions
- Tissue-type plasminogen activator (tPA) is a secreted serine protease that converts plasminogen to plasmin, the effector protease of fibrinolysis; it is strongly potentiated by fibrin binding (EC 3.4.21.68) (Heliyon review, 2024-03; https://doi.org/10.1016/j.heliyon.2024.e26668) (hazare2024diverseoriginsof pages 6-7, hazare2024diverseoriginsof pages 5-6).
- Canonical tPA domain structure comprises a Finger (fibronectin type I) domain, an EGF-like domain, two kringle domains (K1, K2), and a C-terminal serine protease domain; this modular architecture mediates fibrin binding and substrate positioning (Heliyon 2024) (hazare2024diverseoriginsof pages 6-7, hazare2024diverseoriginsof pages 5-6).
- Desmoteplase (DSPA) denotes vampire bat tPA orthologs secreted in saliva, evolved for highly fibrin-specific plasminogen activation; several isoforms (e.g., DSPAα1/α2/β/γ) differ in domain composition and fibrin selectivity (Medcalf 2012; Br J Pharmacol, 2012-01; https://doi.org/10.1111/j.1476-5381.2011.01514.x) (medcalf2012desmoteplasediscoveryinsights pages 2-3, medcalf2012desmoteplasediscoveryinsights pages 3-5).
Domains and structure
- Human tPA consists of F, EGF, K1, K2, and protease domains; kringle domains provide lysine-binding and fibrin interactions, while the protease domain catalyzes cleavage of plasminogen at Arg561–Val562 (Heliyon 2024) (hazare2024diverseoriginsof pages 6-7).
- DSPA isoforms exhibit distinct domain arrangements compared to human tPA. DSPAα variants often lack the K2 domain and the canonical plasmin-sensitive activation cleavage site, remaining as stable single-chain enzymes whose activity is markedly increased only upon fibrin binding (Medcalf 2012) (medcalf2012desmoteplasediscoveryinsights pages 2-3, medcalf2012desmoteplasediscoveryinsights pages 3-5).
Enzymatic function and substrate specificity
- Reaction: conversion of plasminogen to plasmin (Arg561–Val562 cleavage in human plasminogen), with catalytic efficiency enhanced by co-localization on fibrin, which binds both tPA/DSPA and plasminogen (Heliyon 2024) (hazare2024diverseoriginsof pages 6-7).
- Fibrin specificity: human tPA displays strong fibrin preference; DSPAα1 exhibits dramatically higher fibrin selectivity than human tPA, reported as approximately 90–180 fold greater (and up to ~12,900-fold relative increase in fibrin-enhanced activation versus tPA, depending on the metric), consistent with quiescence in plasma and activation primarily on fibrin polymers (Medcalf 2012) (medcalf2012desmoteplasediscoveryinsights pages 3-5, medcalf2012desmoteplasediscoveryinsights pages 12-13, medcalf2012desmoteplasediscoveryinsights pages 14-14, medcalf2012desmoteplasediscoveryinsights pages 13-14).
Inhibitors and regulation
- PAI‑1 is the principal fast-acting inhibitor of tPA; engineering (e.g., tenecteplase) increases PAI‑1 resistance and half-life (Heliyon 2024) (hazare2024diverseoriginsof pages 6-7).
- DSPA variants appear less sensitive to PAI‑1 and certain neuronal serpins in some experimental systems, potentially due to loss of the K2 domain and differences in kringle architecture, though direct kinetic constants versus human tPA are variably reported (Medcalf 2012) (medcalf2012desmoteplasediscoveryinsights pages 2-3, medcalf2012desmoteplasediscoveryinsights pages 3-5).
- In the CNS, human tPA engages additional targets (e.g., LRP, PDGF‑CC and NMDAR interactions) that may increase BBB permeability and contribute to neurotoxicity; DSPA lacks K2 and exhibits reduced interactions with such partners, with preclinical data suggesting fewer neurotoxic effects (Medcalf 2012) (medcalf2012desmoteplasediscoveryinsights pages 9-10, medcalf2012desmoteplasediscoveryinsights pages 14-14).
Localization and cellular/extracellular context
- tPA is secreted by endothelial cells and acts in plasma and on fibrin within thrombi; DSPA is secreted in vampire bat saliva and is specialized for fibrin-targeted plasminogen activation in prey, with minimal fluid-phase activation (Heliyon 2024; Medcalf 2012) (hazare2024diverseoriginsof pages 19-20, medcalf2012desmoteplasediscoveryinsights pages 12-13, medcalf2012desmoteplasediscoveryinsights pages 13-14).
Pathway context
- tPA/DSPA function in the fibrinolytic cascade: tPA/DSPA→plasminogen→plasmin→fibrin degradation; regulation by PAI-1 (inhibits tPA), α2‑antiplasmin (inactivates plasmin), and cofactors such as fibrin structure dictates kinetics (Heliyon 2024) (hazare2024diverseoriginsof pages 5-6, hazare2024diverseoriginsof pages 19-19).
DSPA vs human tPA: mechanistic distinctions
- DSPA isoforms (notably DSPAα1) lack K2 and the proteolytic activation site, remain single-chain with low intrinsic activity, and exhibit extreme fibrin dependence; consequently, DSPA shows minimal fluid-phase plasmin generation and comparatively reduced neurotoxicity in preclinical systems (Medcalf 2012) (medcalf2012desmoteplasediscoveryinsights pages 2-3, medcalf2012desmoteplasediscoveryinsights pages 3-5, medcalf2012desmoteplasediscoveryinsights pages 9-10, medcalf2012desmoteplasediscoveryinsights pages 14-14, medcalf2012desmoteplasediscoveryinsights pages 13-14).
- Human tPA has broader receptor/cell interactions (LRP, NMDAR, PDGF‑CC) with implications for BBB permeability and CNS effects; these may be attenuated for DSPA due to domain differences (Medcalf 2012) (medcalf2012desmoteplasediscoveryinsights pages 9-10, medcalf2012desmoteplasediscoveryinsights pages 14-14).
Recent developments and latest research (emphasis 2023–2024)
- Tenecteplase (TNK), a genetically modified tPA, demonstrates increased PAI‑1 resistance, higher fibrin specificity, and a longer half-life permitting single-bolus administration. A 2024 systematic review/meta‑analysis in the extended window (>4.5 h; three RCTs; 556 TNK vs 560 controls) found increased odds of excellent 90‑day functional outcome (RR 1.17, 95% CI 1.01–1.36) with similar symptomatic ICH and mortality (Therap Adv Neurol Disord, 2024-01; https://doi.org/10.1177/17562864231221324) (palaiodimou2024tenecteplaseforthe pages 1-3).
- 2024 late-window trials: TIMELESS (n=458) found TNK safe up to 24 h with no difference in median mRS at 90 days; TRACE‑III (n=516) reported improved 90‑day functional outcome with TNK 4.5–24 h (33.0% vs 24.2%; RR 1.37, 95% CI 1.04–1.81), with no increase in mortality or symptomatic ICH (BMJ, 2025-05; https://doi.org/10.1136/bmj-2023-076161) (sharma2025advancesintreatments pages 1-2, sharma2025advancesintreatments pages 3-3, sharma2025advancesintreatments pages 2-3).
- Novel delivery concepts: tPA immobilized on micrometer-scale beads increased local plasmin generation and enabled near-complete thrombus removal in mice at doses nearly two orders of magnitude below standard free tPA, suggesting a route to reduce systemic bleeding (bioRxiv, 2024-11; https://doi.org/10.1101/2024.11.06.621942) (osmond2024harnessingmicrometerscaletpa pages 1-4).
Current applications and real-world implementations
- Intravenous alteplase remains widely used for acute ischemic stroke within 4.5 hours; tenecteplase (0.25 mg/kg, single bolus) is increasingly adopted in many centers and is endorsed by European guidance as an alternative with comparable efficacy and safety, especially given logistical advantages (Therap Adv Neurol Disord, 2024-01; BMJ 2025-05) (palaiodimou2024tenecteplaseforthe pages 1-3, sharma2025advancesintreatments pages 1-2, sharma2025advancesintreatments pages 3-3).
- Desmoteplase clinical programs: pooled randomized evidence in the 3–9 h window has been neutral for functional benefit overall, with dose/time-dependent safety signals (Sci Rep, 2016-09; https://doi.org/10.1038/srep33989). Early DIAS/DEDAS studies suggested recanalization at higher doses but subsequent DIAS‑2/3 did not show improved 90‑day outcomes (Medcalf 2012; Br J Pharmacol 2012-01) (shi2016desmoteplaseforacute pages 1-2, medcalf2012desmoteplasediscoveryinsights pages 9-10).
Expert opinions and analysis
- Contemporary reviews emphasize engineering objectives for next-generation thrombolytics: longer half-life, higher fibrin specificity, improved PAI‑1 resistance, and targeted delivery to enhance efficacy while reducing hemorrhage (Heliyon 2024) (hazare2024diverseoriginsof pages 6-7, hazare2024diverseoriginsof pages 19-20).
- Clinical expert synthesis indicates TNK is operationally favored in many centers due to single-bolus administration and expanding evidence base; late-window efficacy appears context-dependent with imaging selection (BMJ 2025-05) (sharma2025advancesintreatments pages 1-2, sharma2025advancesintreatments pages 3-3, sharma2025advancesintreatments pages 2-3).
- Mechanistic expert view (Medcalf) highlights DSPA’s evolutionary optimization for fibrin specificity and reduced neurotoxicity potential compared with tPA, while noting the lack of consistent clinical benefit in RCTs to date—underscoring the importance of patient selection and delivery strategies (Br J Pharmacol 2012-01) (medcalf2012desmoteplasediscoveryinsights pages 2-3, medcalf2012desmoteplasediscoveryinsights pages 9-10, medcalf2012desmoteplasediscoveryinsights pages 14-14, medcalf2012desmoteplasediscoveryinsights pages 13-14).
Relevant statistics and study data
- Tenecteplase extended-window meta-analysis (3 RCTs): excellent functional outcome RR 1.17 (95% CI 1.01–1.36); sICH RR 1.67 (95% CI 0.70–4.00) not significantly different; mortality RR 1.10 (95% CI 0.81–1.49) not significantly different (2024-01) (palaiodimou2024tenecteplaseforthe pages 1-3).
- TIMELESS (2024): n=458; neutral primary outcome (median mRS 3 vs 3; OR 1.13, 95% CI 0.82–1.57), safe profile (BMJ 2025-05) (sharma2025advancesintreatments pages 1-2).
- TRACE‑III (2024): n=516; 90‑day functional outcome 33.0% vs 24.2%; RR 1.37 (95% CI 1.04–1.81); no increase in sICH/mortality (BMJ 2025-05) (sharma2025advancesintreatments pages 1-2).
- Desmoteplase pooled RCTs: n=819 across 5 trials; neutral effect on favorable 90‑day outcome (P=0.42); ICH overall P=0.64; higher ICH risk at 90 μg/kg and 6–9 h window; 125 μg/kg trending higher recanalization (P=0.05) but increased mortality (P=0.04) (Sci Rep 2016-09) (shi2016desmoteplaseforacute pages 1-2).
Functional annotation for K9IJK6 (D. rotundus tPA/DSPA)
- Primary function: secreted serine protease converting plasminogen to plasmin; strongly fibrin-dependent activation that confines activity to clots. DSPA isoforms display heightened fibrin specificity versus human tPA and lack the proteolytic activation cleavage observed in human tPA, remaining single-chain with activation upon fibrin binding (Heliyon 2024; Medcalf 2012) (hazare2024diverseoriginsof pages 6-7, medcalf2012desmoteplasediscoveryinsights pages 3-5, medcalf2012desmoteplasediscoveryinsights pages 12-13).
- Substrate specificity: plasminogen; activation is markedly enhanced on polymeric fibrin, with negligible fluid-phase plasmin generation compared to human tPA (Medcalf 2012) (medcalf2012desmoteplasediscoveryinsights pages 12-13, medcalf2012desmoteplasediscoveryinsights pages 13-14).
- Inhibitors: PAI‑1 potently inhibits human tPA; engineered variants increase resistance. DSPA’s domain differences likely reduce PAI‑1 and neuroserpin susceptibility relative to human tPA, though precise kinetics vary across isoforms and reports (Heliyon 2024; Medcalf 2012) (hazare2024diverseoriginsof pages 6-7, medcalf2012desmoteplasediscoveryinsights pages 2-3, medcalf2012desmoteplasediscoveryinsights pages 3-5).
- Localization: extracellular/secreted; in bats produced in salivary glands; in mammalian physiology tPA is secreted by endothelial cells into plasma (Heliyon 2024; Medcalf 2012) (hazare2024diverseoriginsof pages 19-20, medcalf2012desmoteplasediscoveryinsights pages 12-13).
- Pathways: fibrinolysis (plasminogen→plasmin), regulated by PAI‑1 and α2‑antiplasmin; implications for BBB and CNS interactions differ between tPA and DSPA because of domain architecture (Heliyon 2024; Medcalf 2012) (hazare2024diverseoriginsof pages 5-6, medcalf2012desmoteplasediscoveryinsights pages 9-10, medcalf2012desmoteplasediscoveryinsights pages 14-14).
Embedded summary artifact
| Aspect | Evidence Summary | Key Data/Stats | Sources (with URLs) |
|---|---|---:|---|
| Identity / Organism | UniProt K9IJK6 annotated as a tissue-type plasminogen activator (t-PA) / desmoteplase-like protein from Desmodus rotundus (common vampire bat); matches DSPA family ortholog descriptions. | UniProt accession K9IJK6; organism: Desmodus rotundus. | Hazare et al., 2024 — https://doi.org/10.1016/j.heliyon.2024.e26668 (hazare2024diverseoriginsof pages 6-7, hazare2024diverseoriginsof pages 19-20) |
| Domains / Architecture | tPA-family modular architecture: Finger (FnI)/fibronectin-type I, EGF-like, two kringle domains, C-terminal S1 (trypsin-like) serine protease; kringle/kringle-like and Peptidase_S1 annotations reported. | Domain annotations: kringle signatures (IPR000001, IPR013806) and Peptidase_S1 (IPR009003) consistent with tPA family. | Hazare et al., 2024 — https://doi.org/10.1016/j.heliyon.2024.e26668 (hazare2024diverseoriginsof pages 6-7, hazare2024diverseoriginsof pages 5-6) |
| Enzymatic function (EC, cleavage site, fibrin dependence) | Catalyzes conversion of plasminogen to plasmin (EC 3.4.21.68); activity is strongly enhanced when plasminogen is bound to fibrin (fibrin-dependent activation increases catalytic efficiency markedly). Human tPA cleaves plasminogen at Arg561–Val562 (canonical). | EC 3.4.21.68; fibrin-enhanced plasminogen activation (~hundreds-fold increase for tPA family); human tPA plasma half-life ~4–6 min (for context). | Hazare et al., 2024 — https://doi.org/10.1016/j.heliyon.2024.e26668 (hazare2024diverseoriginsof pages 6-7, hazare2024diverseoriginsof pages 5-6) |
| Inhibitors and resistance (PAI-1, neuroserpin) | Plasminogen activator inhibitor-1 (PAI-1) is the principal inhibitor of tPA; engineered/variant PAs (e.g., tenecteplase) increase PAI-1 resistance. DSPA/desmoteplase variants reported lower sensitivity to PAI-1 and to some neuronal serpins in experimental work. | Residues around 296–299 implicated in PAI-1 interaction (human tPA); third-generation variants increase half-life and PAI-1 resistance. | Hazare et al., 2024 — https://doi.org/10.1016/j.heliyon.2024.e26668 (hazare2024diverseoriginsof pages 6-7, hazare2024diverseoriginsof pages 19-20) |
| Localization / Secretion | Secreted extracellular protease: human tPA secreted by endothelial cells into plasma; DSPA/desmoteplase is secreted in vampire bat saliva (adapted for prey anticoagulation). | Circulating/secreted localization; DSPA origin: salivary secretion in Desmodus rotundus. | Hazare et al., 2024 — https://doi.org/10.1016/j.heliyon.2024.e26668 (hazare2024diverseoriginsof pages 19-20) |
| Pathway context (fibrinolysis) | Central activator in the plasminogen–plasmin fibrinolytic cascade: produces plasmin which degrades fibrin; regulated by PAI-1, α2-antiplasmin and other modulators; plasmin/tPA also implicated in blood–brain barrier and CNS biology. | Core position in fibrinolysis; interacts with PAI-1 and α2-antiplasmin; relevant to thrombolysis and BBB effects. | Hazare et al., 2024 — https://doi.org/10.1016/j.heliyon.2024.e26668 (hazare2024diverseoriginsof pages 5-6, hazare2024diverseoriginsof pages 19-19) |
| DSPA (desmoteplase) vs human tPA (key differences) | Reported evolutionary specialization: DSPA/desmoteplase shows high fibrin specificity and (in some studies) reduced neurotoxicity vs human tPA; evolved for efficient anticoagulation in saliva. Structural/domain layout is tPA-like but with variant sequence features conferring functional differences. | Claims: increased fibrin specificity and altered inhibitor sensitivity for DSPA variants (experimental reports summarized in reviews). | Hazare et al., 2024 — https://doi.org/10.1016/j.heliyon.2024.e26668 (hazare2024diverseoriginsof pages 19-20) |
| Clinical / Applications (alteplase; tenecteplase 2023–2024 updates) | Alteplase (recombinant tPA) remains standard for acute ischemic stroke; tenecteplase (engineered tPA variant) has emerging RCT/meta-analysis evidence (2023–2024) supporting non-inferiority and practical advantages (longer half-life, single-bolus). | Recent reviews/meta-analyses (2023–2024) report tenecteplase 0.25 mg/kg as a viable alternative with comparable safety and improved logistics; dosing & outcomes under active investigation. | Hazare et al., 2024 — https://doi.org/10.1016/j.heliyon.2024.e26668 (hazare2024diverseoriginsof pages 6-7) |
| Desmoteplase trials (DIAS and pooled analyses) | Clinical trials of desmoteplase (DIAS-series and subsequent pooled analyses) showed mixed efficacy in extended time windows: neutral on primary functional endpoints overall but generally favorable safety for haemorrhage in some analyses; subgroup/dose effects reported. | Example pooled analysis: ~819 patients across 5 RCTs (meta-analysis) with no significant improvement in favorable outcome at Day 90 but lower intracranial hemorrhage in some comparisons (Shi et al., 2016 summary cited in reviews). | Hazare et al., 2024 — https://doi.org/10.1016/j.heliyon.2024.e26668 (hazare2024diverseoriginsof pages 19-20, hazare2024diverseoriginsof pages 19-19) |
| Novel delivery systems / engineering (2023–2024) | Recent preclinical engineering and delivery approaches aim to increase local plasmin generation and reduce systemic bleeding (e.g., particle/ bead-based tPA delivery, targeted nanomedicines and longer-acting engineered PAs). | Preclinical reports describe micrometer-scale tPA carriers that amplify plasmin generation and allow lower systemic doses (proof-of-concept). | Hazare et al., 2024 — https://doi.org/10.1016/j.heliyon.2024.e26668 (hazare2024diverseoriginsof pages 5-6) |
Table: Concise functional annotation table for UniProt K9IJK6 (Desmodus rotundus tPA/desmoteplase), summarizing identity, domains, function, inhibitors, localization, pathway context, DSPA vs human tPA differences, clinical trial outcomes, and recent delivery/engineering developments with evidence citations. This provides a quick reference for the protein's key properties and relevant literature links.
Limitations and notes
- The gene symbol for K9IJK6 is not specified in UniProt; identity relies on UniProt’s accession and annotation plus concordant literature on vampire bat DSPA family members. DSPA-specific clinical work largely precedes 2020; 2023–2024 updates chiefly pertain to human-engineered tPA variants (tenecteplase) and delivery innovations (hazare2024diverseoriginsof pages 6-7, palaiodimou2024tenecteplaseforthe pages 1-3, osmond2024harnessingmicrometerscaletpa pages 1-4).
References
- Hazare C, Bhagwat P, Singh S, Pillai S. Diverse origins of fibrinolytic enzymes: a comprehensive review. Heliyon. 2024-03;10:e26668. https://doi.org/10.1016/j.heliyon.2024.e26668 (hazare2024diverseoriginsof pages 6-7, hazare2024diverseoriginsof pages 19-20, hazare2024diverseoriginsof pages 5-6, hazare2024diverseoriginsof pages 19-19).
- Medcalf RL. Desmoteplase: discovery, insights and opportunities for ischaemic stroke. Br J Pharmacol. 2012-01;165:75–89. https://doi.org/10.1111/j.1476-5381.2011.01514.x (medcalf2012desmoteplasediscoveryinsights pages 2-3, medcalf2012desmoteplasediscoveryinsights pages 5-7, medcalf2012desmoteplasediscoveryinsights pages 3-5, medcalf2012desmoteplasediscoveryinsights pages 12-13, medcalf2012desmoteplasediscoveryinsights pages 9-10, medcalf2012desmoteplasediscoveryinsights pages 14-14, medcalf2012desmoteplasediscoveryinsights pages 13-14).
- Palaiodimou L, et al. Tenecteplase for the treatment of acute ischemic stroke in the extended time window: a systematic review and meta-analysis. Ther Adv Neurol Disord. 2024-01. https://doi.org/10.1177/17562864231221324 (palaiodimou2024tenecteplaseforthe pages 1-3).
- Sharma R, Lee K. Advances in treatments for acute ischemic stroke. BMJ. 2025-05;389:e076161. https://doi.org/10.1136/bmj-2023-076161 (sharma2025advancesintreatments pages 1-2, sharma2025advancesintreatments pages 3-3, sharma2025advancesintreatments pages 2-3).
- Shi L, et al. Desmoteplase for acute ischemic stroke within 3 to 9 hours after symptom onset: evidence from randomized controlled trials. Sci Rep. 2016-09;6:33989. https://doi.org/10.1038/srep33989 (shi2016desmoteplaseforacute pages 1-2).
- Osmond MJ, et al. Harnessing micrometer-scale tPA beads for high plasmin generation and accelerated fibrinolysis. bioRxiv. 2024-11. https://doi.org/10.1101/2024.11.06.621942 (osmond2024harnessingmicrometerscaletpa pages 1-4).
References
(hazare2024diverseoriginsof pages 6-7): Chinmay Hazare, Prashant Bhagwat, Suren Singh, and Santhosh Pillai. Diverse origins of fibrinolytic enzymes: a comprehensive review. Heliyon, 10:e26668, Mar 2024. URL: https://doi.org/10.1016/j.heliyon.2024.e26668, doi:10.1016/j.heliyon.2024.e26668. This article has 31 citations and is from a peer-reviewed journal.
(hazare2024diverseoriginsof pages 5-6): Chinmay Hazare, Prashant Bhagwat, Suren Singh, and Santhosh Pillai. Diverse origins of fibrinolytic enzymes: a comprehensive review. Heliyon, 10:e26668, Mar 2024. URL: https://doi.org/10.1016/j.heliyon.2024.e26668, doi:10.1016/j.heliyon.2024.e26668. This article has 31 citations and is from a peer-reviewed journal.
(medcalf2012desmoteplasediscoveryinsights pages 2-3): Robert L Medcalf. Desmoteplase: discovery, insights and opportunities for ischaemic stroke. British Journal of Pharmacology, 165:75-89, Jan 2012. URL: https://doi.org/10.1111/j.1476-5381.2011.01514.x, doi:10.1111/j.1476-5381.2011.01514.x. This article has 75 citations and is from a highest quality peer-reviewed journal.
(medcalf2012desmoteplasediscoveryinsights pages 5-7): Robert L Medcalf. Desmoteplase: discovery, insights and opportunities for ischaemic stroke. British Journal of Pharmacology, 165:75-89, Jan 2012. URL: https://doi.org/10.1111/j.1476-5381.2011.01514.x, doi:10.1111/j.1476-5381.2011.01514.x. This article has 75 citations and is from a highest quality peer-reviewed journal.
(medcalf2012desmoteplasediscoveryinsights pages 3-5): Robert L Medcalf. Desmoteplase: discovery, insights and opportunities for ischaemic stroke. British Journal of Pharmacology, 165:75-89, Jan 2012. URL: https://doi.org/10.1111/j.1476-5381.2011.01514.x, doi:10.1111/j.1476-5381.2011.01514.x. This article has 75 citations and is from a highest quality peer-reviewed journal.
(medcalf2012desmoteplasediscoveryinsights pages 12-13): Robert L Medcalf. Desmoteplase: discovery, insights and opportunities for ischaemic stroke. British Journal of Pharmacology, 165:75-89, Jan 2012. URL: https://doi.org/10.1111/j.1476-5381.2011.01514.x, doi:10.1111/j.1476-5381.2011.01514.x. This article has 75 citations and is from a highest quality peer-reviewed journal.
(medcalf2012desmoteplasediscoveryinsights pages 14-14): Robert L Medcalf. Desmoteplase: discovery, insights and opportunities for ischaemic stroke. British Journal of Pharmacology, 165:75-89, Jan 2012. URL: https://doi.org/10.1111/j.1476-5381.2011.01514.x, doi:10.1111/j.1476-5381.2011.01514.x. This article has 75 citations and is from a highest quality peer-reviewed journal.
(medcalf2012desmoteplasediscoveryinsights pages 13-14): Robert L Medcalf. Desmoteplase: discovery, insights and opportunities for ischaemic stroke. British Journal of Pharmacology, 165:75-89, Jan 2012. URL: https://doi.org/10.1111/j.1476-5381.2011.01514.x, doi:10.1111/j.1476-5381.2011.01514.x. This article has 75 citations and is from a highest quality peer-reviewed journal.
(medcalf2012desmoteplasediscoveryinsights pages 9-10): Robert L Medcalf. Desmoteplase: discovery, insights and opportunities for ischaemic stroke. British Journal of Pharmacology, 165:75-89, Jan 2012. URL: https://doi.org/10.1111/j.1476-5381.2011.01514.x, doi:10.1111/j.1476-5381.2011.01514.x. This article has 75 citations and is from a highest quality peer-reviewed journal.
(hazare2024diverseoriginsof pages 19-20): Chinmay Hazare, Prashant Bhagwat, Suren Singh, and Santhosh Pillai. Diverse origins of fibrinolytic enzymes: a comprehensive review. Heliyon, 10:e26668, Mar 2024. URL: https://doi.org/10.1016/j.heliyon.2024.e26668, doi:10.1016/j.heliyon.2024.e26668. This article has 31 citations and is from a peer-reviewed journal.
(hazare2024diverseoriginsof pages 19-19): Chinmay Hazare, Prashant Bhagwat, Suren Singh, and Santhosh Pillai. Diverse origins of fibrinolytic enzymes: a comprehensive review. Heliyon, 10:e26668, Mar 2024. URL: https://doi.org/10.1016/j.heliyon.2024.e26668, doi:10.1016/j.heliyon.2024.e26668. This article has 31 citations and is from a peer-reviewed journal.
(palaiodimou2024tenecteplaseforthe pages 1-3): Lina Palaiodimou, Aristeidis H. Katsanos, Guillaume Turc, Michele Romoli, Aikaterini Theodorou, Robin Lemmens, Simona Sacco, Georgios Velonakis, Charalambos Vlachopoulos, and Georgios Tsivgoulis. Tenecteplase for the treatment of acute ischemic stroke in the extended time window: a systematic review and meta-analysis. Therapeutic Advances in Neurological Disorders, Jan 2024. URL: https://doi.org/10.1177/17562864231221324, doi:10.1177/17562864231221324. This article has 20 citations and is from a peer-reviewed journal.
(sharma2025advancesintreatments pages 1-2): Richa Sharma and Kun Lee. Advances in treatments for acute ischemic stroke. BMJ, 389:e076161, May 2025. URL: https://doi.org/10.1136/bmj-2023-076161, doi:10.1136/bmj-2023-076161. This article has 15 citations and is from a domain leading peer-reviewed journal.
(sharma2025advancesintreatments pages 3-3): Richa Sharma and Kun Lee. Advances in treatments for acute ischemic stroke. BMJ, 389:e076161, May 2025. URL: https://doi.org/10.1136/bmj-2023-076161, doi:10.1136/bmj-2023-076161. This article has 15 citations and is from a domain leading peer-reviewed journal.
(sharma2025advancesintreatments pages 2-3): Richa Sharma and Kun Lee. Advances in treatments for acute ischemic stroke. BMJ, 389:e076161, May 2025. URL: https://doi.org/10.1136/bmj-2023-076161, doi:10.1136/bmj-2023-076161. This article has 15 citations and is from a domain leading peer-reviewed journal.
(osmond2024harnessingmicrometerscaletpa pages 1-4): Matthew J. Osmond, Fabrice Dabertrand, Nidia Quillinan, Enming J. Su, Daniel A. Lawrence, David W.M. Marr, and Keith B. Neeves. Harnessing micrometer-scale tpa beads for high plasmin generation and accelerated fibrinolysis. bioRxiv, Nov 2024. URL: https://doi.org/10.1101/2024.11.06.621942, doi:10.1101/2024.11.06.621942. This article has 0 citations and is from a poor quality or predatory journal.
(shi2016desmoteplaseforacute pages 1-2): Ligen Shi, Feng Liang, Yunping Li, Anwen Shao, Keren Zhou, Jun Yu, and Jianmin Zhang. Desmoteplase for acute ischemic stroke within 3 to 9 hours after symptom onset: evidence from randomized controlled trials. Scientific Reports, Sep 2016. URL: https://doi.org/10.1038/srep33989, doi:10.1038/srep33989. This article has 7 citations and is from a peer-reviewed journal.
id: K9IJK6
gene_symbol: K9IJK6
product_type: PROTEIN
status: INITIALIZED
taxon:
id: NCBITaxon:9430
label: Desmodus rotundus
description: 'TODO: Add description for K9IJK6'
existing_annotations:
- term:
id: GO:0014909
label: smooth muscle cell migration
evidence_type: IEA
original_reference_id: GO_REF:0000118
review:
summary: TreeGrafter smooth muscle cell migration annotation lacks direct
evidence for this salivary protein.
action: REMOVE
reason: No experimental support for smooth muscle cell migration; UniProt
notes a secreted plasminogen activator with caution about conserved
residues.
supported_by:
- &id001
reference_id: file:DESRO/K9IJK6/K9IJK6-uniprot.txt
supporting_text: '"CAUTION: Lacks conserved residue(s) required for the
propagation of feature annotation."'
- term:
id: GO:0031639
label: plasminogen activation
evidence_type: IEA
original_reference_id: GO_REF:0000118
review:
summary: Plasminogen activation is suggested computationally, but UniProt
cautions that conserved residues required for feature propagation are
missing.
action: UNDECIDED
reason: No direct experimental evidence for plasminogen activation in this
DESRO protein and UniProt flags missing conserved residues.
supported_by:
- *id001
- reference_id: file:DESRO/K9IJK6/K9IJK6-deep-research-falcon.md
supporting_text: 'Tissue-type plasminogen activator (tPA) is a secreted serine protease that converts plasminogen to plasmin, the effector protease of fibrinolysis; it is strongly potentiated by fibrin binding'
- term:
id: GO:0048008
label: platelet-derived growth factor receptor signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000118
review:
summary: PDGF receptor signaling pathway annotation is an automated
inference not supported by evidence for this salivary protein.
action: REMOVE
reason: No experimental support or UniProt evidence for PDGF receptor
pathway involvement in DESRO K9IJK6.
- term:
id: GO:0004252
label: serine-type endopeptidase activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: Serine-type endopeptidase activity is predicted, but UniProt
flags missing conserved residues for feature propagation.
action: UNDECIDED
reason: Activity is inferred from EC mapping; caution indicates
uncertainty about catalytic competence.
supported_by:
- *id001
- reference_id: file:DESRO/K9IJK6/K9IJK6-deep-research-falcon.md
supporting_text: 'Tissue-type plasminogen activator (tPA) is a secreted serine protease that converts plasminogen to plasmin, the effector protease of fibrinolysis; it is strongly potentiated by fibrin binding'
- term:
id: GO:0005576
label: extracellular region
evidence_type: IEA
original_reference_id: GO_REF:0000044
review:
summary: Secreted protein annotation supports extracellular region
localization.
action: ACCEPT
reason: UniProt indicates the protein is secreted.
supported_by:
- &id002
reference_id: file:DESRO/K9IJK6/K9IJK6-uniprot.txt
supporting_text: '"SUBCELLULAR LOCATION: Secreted"'
- reference_id: file:DESRO/K9IJK6/K9IJK6-deep-research-falcon.md
supporting_text: 'Tissue-type plasminogen activator (tPA) is a secreted serine protease that converts plasminogen to plasmin, the effector protease of fibrinolysis; it is strongly potentiated by fibrin binding'
- term:
id: GO:0005615
label: extracellular space
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: Secreted protein annotation supports extracellular space
localization.
action: ACCEPT
reason: UniProt indicates the protein is secreted.
supported_by:
- *id002
- reference_id: file:DESRO/K9IJK6/K9IJK6-deep-research-falcon.md
supporting_text: 'Tissue-type plasminogen activator (tPA) is a secreted serine protease that converts plasminogen to plasmin, the effector protease of fibrinolysis; it is strongly potentiated by fibrin binding'
- term:
id: GO:0006508
label: proteolysis
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: Proteolysis is inferred from enzyme keywords but catalytic
activity is uncertain due to UniProt caution.
action: UNDECIDED
reason: No experimental evidence and UniProt flags missing conserved
residues needed for confident protease annotation.
supported_by:
- *id001
- term:
id: GO:0008233
label: peptidase activity
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: Peptidase activity is a keyword-based inference with uncertainty
about catalytic residues.
action: UNDECIDED
reason: UniProt caution suggests catalytic activity may not be preserved.
supported_by:
- *id001
- term:
id: GO:0008236
label: serine-type peptidase activity
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: Serine-type peptidase activity is inferred but uncertain due to
missing conserved residues.
action: UNDECIDED
reason: UniProt caution flags lack of conserved residues required for
feature propagation.
supported_by:
- *id001
- term:
id: GO:0016787
label: hydrolase activity
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: Hydrolase activity is a generic inference and is uncertain given
UniProt caution.
action: UNDECIDED
reason: No direct evidence for hydrolase activity; UniProt flags missing
conserved residues.
supported_by:
- *id001
- term:
id: GO:0071396
label: cellular response to lipid
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: Cellular response to lipid is an ARBA inference with no direct
evidence for this salivary protein.
action: REMOVE
reason: No experimental support for cellular response to lipid in DESRO
K9IJK6.
- term:
id: GO:1901701
label: cellular response to oxygen-containing compound
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: Cellular response to oxygen-containing compound is an ARBA
inference without direct evidence.
action: REMOVE
reason: No experimental support for cellular response to oxygen-containing
compound in DESRO K9IJK6.
references:
- id: GO_REF:0000043
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword
mapping
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular
Location vocabulary mapping, accompanied by conservative changes to GO
terms applied by UniProt
findings: []
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning
models
findings: []
- id: GO_REF:0000118
title: TreeGrafter-generated GO annotations
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings: []