RasC is a member of the Ras subfamily of small monomeric GTPases in the social amoeba Dictyostelium discoideum. Like other Ras proteins, it cycles between an inactive GDP-bound and an active GTP-bound state, possesses intrinsic GTPase activity (EC 3.6.5.2), and is post-translationally prenylated at a C-terminal geranylgeranyl cysteine that anchors it to the cytoplasmic face of the plasma membrane. RasC is activated in response to extracellular cAMP sensed through G-protein-coupled cAMP receptors, via its dedicated guanine-nucleotide exchange factor RasGEFA (Aimless). Together with the partly redundant paralog RasG, RasC is a central regulator of early development. It is required for aggregation, where it preferentially controls activation of adenylyl cyclase (ACA) and the cAMP relay, and it is the principal Ras that activates the TORC2-PKB (Akt/PKBR1) pathway, binding the catalytic domain of TOR and forming a hetero-oligomer with phosphorylated GDP-bound RacE to stimulate mTORC2-mediated AKT phosphorylation. Through TORC2-PKB signaling, active RasC, enriched at the leading edge of chemotaxing cells, sets the temporal and spatial dynamics of the actin cytoskeleton, pseudopod formation, and directed cell migration. RasC also participates in additional Ras-dependent responses including folate chemotaxis and polyphosphate signaling, and it interacts with effectors and regulators such as the LATS-family kinase NdrC, the RasGAP C2GAP1, and the scaffold-associated RasGEF complex.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0003924
GTPase activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: RasC is a Ras-family small GTPase with intrinsic GTPase activity that hydrolyzes bound GTP; this is a core molecular function conserved across the Ras subfamily.
Reason: Intrinsic GTPase activity is a defining, well-supported feature of Ras subfamily proteins and is consistent with the UniProt record (EC 3.6.5.2) and the biochemical framing of RasC as a GDP/GTP molecular switch.
Supporting Evidence:
PMID:15143344
the subsequent inactivation is due to an enhancement of the intrinsic GTPase activity, which is stimulated by the GTPase-activating proteins (GAPs)
|
|
GO:0005886
plasma membrane
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: RasC is a prenylated (geranylgeranylated) protein anchored to the plasma membrane, where activated RasC is enriched at the leading edge of chemotaxing cells.
Reason: Plasma-membrane localization is expected for a lipid-anchored Ras GTPase and is consistent with the leading-edge enrichment of active Ras in migrating cells.
Supporting Evidence:
PMID:20493808
active Ras is enriched at the leading edge of chemotaxing cells
|
|
GO:0007264
small GTPase-mediated signal transduction
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: RasC functions as a small GTPase molecular switch transducing extracellular (chemoattractant) signals to downstream effector pathways.
Reason: This is the core biological process for RasC, which relays G-protein-coupled receptor signals to adenylyl cyclase and the TORC2-PKB pathway.
Supporting Evidence:
PMID:17380187
Ras proteins are small, monomeric GTPases that act as crucial regulators of a number of cellular signalling pathways
|
|
GO:0000281
mitotic cytokinesis
|
IBA
GO_REF:0000033 |
REMOVE |
Summary: This phylogenetic (IBA) inference of a cytokinesis role is contradicted by direct experimental evidence in Dictyostelium, where loss of RasC leaves cytokinesis and the division rate essentially normal.
Reason: The IBA annotation is over-propagated from Ras-family members that function in cytokinesis. In Dictyostelium, cytokinesis is regulated mainly by RasG/RasB (via NdrC), whereas rasC-null cells divide normally, so this term does not represent RasC function.
Propagation Review
Root cause:
PROPAGATION BAD
Failure modes:
WRONG ORTHOLOG OR PARALOG
Sources checked:
PANTHER:PTN001177391
· PANTHER node for the Ras small-GTPase family
SUPPORTS SOURCE BUT NOT TARGET
Mitotic cytokinesis in Dictyostelium is the role of RasG; the term is over-propagated across Ras paralogs to RasC
dictyBase:DDB_G0293434
· Dictyostelium Ras-family paralog (RasG-type)
SUPPORTS SOURCE BUT NOT TARGET
Cytokinesis function belongs to RasG, not RasC
Supporting Evidence:
PMID:15878331
there was no change in the rate of cell division
|
|
GO:0044351
macropinocytosis
|
IBA
GO_REF:0000033 |
MARK AS OVER ANNOTATED |
Summary: The IBA macropinocytosis inference is not supported for RasC; in Dictyostelium, RasG is the Ras protein that promotes macropinocytosis, and loss of RasC actually increases fluid-phase endocytosis rather than reducing it.
Reason: RasC does not positively drive macropinocytosis; rasC-null cells show increased liquid-phase endocytosis. The term is over-propagated from RasG-like family members.
Propagation Review
Root cause:
PROPAGATION BAD
Failure modes:
WRONG ORTHOLOG OR PARALOG
Sources checked:
PANTHER:PTN001177391
· PANTHER node for the Ras small-GTPase family
SUPPORTS SOURCE BUT NOT TARGET
Macropinocytosis is driven by other Dictyostelium Ras paralogs such as RasG and RasS; rasC-null cells show increased macropinocytosis, so the positive role does not belong to RasC
dictyBase:DDB_G0293434
· Dictyostelium Ras-family paralog
SUPPORTS SOURCE BUT NOT TARGET
Macropinocytosis role belongs to a different Ras paralog subfamily, not RasC
Supporting Evidence:
PMID:15878331
Cells lacking RasC also contained more protein and were larger in
|
|
GO:0003925
G protein activity
|
IEA
GO_REF:0000003 |
ACCEPT |
Summary: RasC is a small monomeric GTPase (G protein), consistent with the EC 3.6.5.2 mapping used for this electronic annotation.
Reason: RasC is a bona fide Ras-family small GTPase functioning as a nucleotide-dependent molecular switch; the EC-to-GO mapping is appropriate.
Supporting Evidence:
PMID:15143344
The Ras subfamily consists of small, monomeric GTPases that act as molecular switches in cellular signalling events
|
|
GO:0005525
GTP binding
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: RasC binds guanine nucleotides (GTP/GDP), cycling between active GTP-bound and inactive GDP-bound states.
Reason: GTP binding is a defining feature of Ras GTPases and is directly supported by the demonstration that RasC is activated (GTP-loaded) in response to cAMP.
Supporting Evidence:
PMID:15143344
it was shown that RasC was activated in aggregation-competent cells in response to cAMP
|
|
GO:0003924
GTPase activity
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: InterPro2GO inference of GTPase activity from the small-GTPase domain; correct and consistent with the IBA GTPase annotation.
Reason: RasC possesses intrinsic GTPase activity as a Ras-family small GTPase.
Supporting Evidence:
PMID:15143344
the subsequent inactivation is due to an enhancement of the intrinsic GTPase activity, which is stimulated by the GTPase-activating proteins (GAPs)
|
|
GO:0005886
plasma membrane
|
IEA
GO_REF:0000044 |
ACCEPT |
Summary: UniProt subcellular-location mapping to plasma membrane, consistent with the C-terminal prenyl (geranylgeranyl) lipid anchor and leading-edge localization of active RasC.
Reason: Membrane localization is expected for a lipid-anchored Ras GTPase; this duplicates the IBA plasma membrane annotation.
Supporting Evidence:
PMID:20493808
active Ras is enriched at the leading edge of chemotaxing cells
|
|
GO:0007165
signal transduction
|
IEA
GO_REF:0000002 |
ACCEPT |
Summary: General signal transduction term consistent with RasC's role as a signaling GTPase; correct but non-specific relative to more informative child terms.
Reason: RasC is a signaling molecular switch; the term is accurate though general.
Supporting Evidence:
PMID:11500376
RasC appears to function as a regulatory molecule for both the cAMP relay and the chemotactic response to cAMP.
|
|
GO:0016020
membrane
|
IEA
GO_REF:0000002 |
KEEP AS NON CORE |
Summary: Generic membrane localization term, redundant with the more specific plasma membrane annotation.
Reason: The parent term "membrane" is correct but uninformative given the specific plasma membrane localization of prenylated RasC.
Supporting Evidence:
PMID:20493808
active Ras is enriched at the leading edge of chemotaxing cells
|
|
GO:0071321
cellular response to cGMP
|
IGI
PMID:18180289 Rap1 activation in response to cAMP occurs downstream of ras... |
KEEP AS NON CORE |
Summary: RasC (with RasG) is required for cAMP-induced guanylyl cyclase activation during aggregation; the connection to cGMP responses is indirect and predominantly through RasG.
Reason: The genetic evidence links RasC/RasG to guanylyl cyclase activation, but cGMP signaling is predominantly a RasG function and is peripheral to RasC's core role in ACA and TORC2 activation.
Supporting Evidence:
PMID:18180289
guanylyl cyclase activation is also abolished in the
|
|
GO:0019887
protein kinase regulator activity
|
IDA
PMID:15878331 Loss of the Dictyostelium RasC protein alters vegetative cel... |
KEEP AS NON CORE |
Summary: RasC positively regulates the activity of the PKB/Akt kinases (via TORC2), reflected in reduced Akt/PKB and ERK2 phosphorylation in rasC-null cells.
Reason: RasC regulates downstream protein kinases indirectly (through TORC2), so a general "protein kinase regulator activity" molecular function is defensible but less informative than its GTPase/TORC2-activation functions.
Supporting Evidence:
PMID:15878331
ERK2 phosphorylation and reduced Akt/PKB phosphorylation in response to folate
|
|
GO:0043491
phosphatidylinositol 3-kinase/protein kinase B signal transduction
|
IMP
PMID:15878331 Loss of the Dictyostelium RasC protein alters vegetative cel... |
ACCEPT |
Summary: RasC acts upstream of the PI3K/PKB (Akt) pathway; loss of RasC reduces Akt/PKB phosphorylation in response to chemoattractant.
Reason: RasC is a genuine upstream activator of PKB signaling (chiefly via TORC2), a core aspect of its function during chemotaxis and aggregation.
Supporting Evidence:
PMID:15878331
ERK2 phosphorylation and reduced Akt/PKB phosphorylation in response to folate
PMID:11500376
RasC appears to be a central regulatory molecule acting downstream of serpentine receptor stimulation by cAMP that is required for two distinct effector pathways: the activation of Akt/PKB through PI3K and the activation of adenylyl cyclase.
|
|
GO:0140986
G protein-coupled chemorepellent receptor signaling pathway
|
IGI
PMID:30462573 An endogenous chemorepellent directs cell movement by inhibi... |
KEEP AS NON CORE |
Summary: RasC (redundantly with RasG) is required for AprA chemorepellent responses; rasC-/rasG- double mutants fail to move away from AprA.
Reason: The chemorepulsion role is genuine but redundant with RasG and peripheral to RasC's principal roles in ACA and TORC2 activation.
Supporting Evidence:
PMID:30462573
signal transduction pathways including Ras
|
|
GO:0000165
MAPK cascade
|
IMP
PMID:15878331 Loss of the Dictyostelium RasC protein alters vegetative cel... |
KEEP AS NON CORE |
Summary: RasC influences ERK2/MAPK phosphorylation in a context-dependent manner (reduced in response to folate), although for cAMP relay ERK2 activation is RasC-independent.
Reason: The MAPK role is context-dependent and not RasC's core output; during cAMP relay, cAMP-induced ERK2 phosphorylation is unaffected in rasC-null cells.
Supporting Evidence:
PMID:15878331
ERK2 phosphorylation and reduced Akt/PKB phosphorylation in response to folate
|
|
GO:0031932
TORC2 complex
|
IDA
PMID:31263268 Phosphorylated Rho-GDP directly activates mTORC2 kinase towa... |
KEEP AS NON CORE |
Summary: Activated RasC associates with TORC2 by binding TOR and by forming a RacE-RasC-mTORC2 supercomplex, but RasC is a regulatory GTPase rather than a stoichiometric core subunit of TORC2.
Reason: RasC transiently binds and activates TORC2 rather than being a constitutive subunit, so the part_of relationship overstates the association. The functional binding and activation are better captured by the TORC2-binding and positive-regulation terms.
Supporting Evidence:
PMID:31263268
assembles the RacE-RasC-mTORC2 supercomplex that phosphorylates AKT
|
|
GO:1904515
positive regulation of TORC2 signaling
|
IDA
PMID:31263268 Phosphorylated Rho-GDP directly activates mTORC2 kinase towa... |
ACCEPT |
Summary: GTP-bound RasC, together with phosphorylated GDP-RacE, directly stimulates mTORC2 kinase activity toward AKT.
Reason: Positive regulation of TORC2 is a core RasC function, demonstrated by in vitro reconstitution of RasC-dependent mTORC2-mediated AKT phosphorylation.
Supporting Evidence:
PMID:31263268
assembles the RacE-RasC-mTORC2 supercomplex that phosphorylates AKT
|
|
GO:0051593
response to folic acid
|
IGI
PMID:23132928 Delineating the core regulatory elements crucial for directe... |
KEEP AS NON CORE |
Summary: RasC contributes to folic-acid-stimulated responses in vegetative cells, notably PKB substrate phosphorylation, via the TORC2 pathway.
Reason: RasC participates in folate-triggered signaling but this is one of several redundant vegetative-cell roles, secondary to its core aggregation/ACA and TORC2 functions.
Supporting Evidence:
PMID:23132928
Ras C activates the TORC2 complex, which in turn triggers PKBA and a second PKB homolog, PKBR1
|
|
GO:0007165
signal transduction
|
IMP
PMID:11500376 RasC is required for optimal activation of adenylyl cyclase ... |
ACCEPT |
Summary: RasC is a signaling GTPase required for cAMP relay and chemotactic responses during aggregation.
Reason: Signal transduction is accurate for RasC, supported by the aggregation-defective phenotype of rasC-null cells and their role in cAMP signaling.
Supporting Evidence:
PMID:11500376
RasC appears to function as a regulatory molecule for both the cAMP relay and the chemotactic response to cAMP.
|
|
GO:0007188
adenylate cyclase-modulating G protein-coupled receptor signaling pathway
|
IMP
PMID:15143344 Chemoattractant-induced Ras activation during Dictyostelium ... |
ACCEPT |
Summary: RasC is activated downstream of the cAMP GPCR and is required for chemoattractant-induced activation of adenylyl cyclase (the cAMP relay).
Reason: This is a core function of RasC - transducing cAMP-receptor signals to adenylyl cyclase during aggregation.
Supporting Evidence:
PMID:15143344
it was shown that RasC was activated in aggregation-competent cells in response to cAMP
PMID:17380187
RasG regulates chemotaxis and RasC is responsible for adenylyl cyclase activation
|
|
GO:1903665
negative regulation of asexual reproduction
|
IMP
PMID:34154396 An Autocrine Negative Feedback Loop Inhibits Dictyostelium d... |
KEEP AS NON CORE |
Summary: RasC is required for extracellular-polyphosphate-mediated inhibition of cell proliferation under low-nutrient conditions.
Reason: RasC participates in the polyphosphate proliferation-inhibition pathway, but this is a specialized, redundant signaling role distinct from its core aggregation/TORC2 functions.
Supporting Evidence:
PMID:34154396
the loss of GrlD or RasC blocked the sensitivity of cells to polyphosphate
|
|
GO:0051291
protein heterooligomerization
|
IDA
PMID:33238110 Hetero-oligomerization of Rho and Ras GTPases Connects GPCR ... |
KEEP AS NON CORE |
Summary: Chemoattractant stimulation induces GTP-bound RasC to hetero-oligomerize with phosphorylated GDP-bound RacE, an interaction required for mTORC2-AKT activation.
Reason: The RasC-RacE hetero-oligomerization is a genuine, directly demonstrated interaction, but it is a mechanistic step in TORC2 activation rather than a stand-alone core function.
Supporting Evidence:
PMID:33238110
these two GTPases directly interact in cells
|
|
GO:0003925
G protein activity
|
IDA
PMID:17380187 Cyclic AMP signalling in Dictyostelium: G-proteins activate ... |
ACCEPT |
Summary: RasC is a small GTPase whose GDP-to-GTP exchange is catalyzed specifically by RasGEFA, confirming its function as a nucleotide-switch G protein.
Reason: Direct in vitro nucleotide-exchange and activation assays establish RasC as a functional Ras-family G protein.
Supporting Evidence:
PMID:17380187
RasGEFA catalysed the removal of GDP from RasC but not from other Ras subfamily proteins, confirming that RasGEFA is specific for RasC
|
|
GO:0003925
G protein activity
|
IMP
PMID:23132928 Delineating the core regulatory elements crucial for directe... |
ACCEPT |
Summary: RasC functions as an activatable G protein upstream of the TORC2-PKB pathway in chemotactic responses.
Reason: Consistent with the direct IDA evidence that RasC is a Ras-family G protein; this genetic annotation supports the same molecular function.
Supporting Evidence:
PMID:23132928
Ras C activates the TORC2 complex, which in turn triggers PKBA and a second PKB homolog, PKBR1
|
|
GO:0005515
protein binding
|
IPI
PMID:31263268 Phosphorylated Rho-GDP directly activates mTORC2 kinase towa... |
KEEP AS NON CORE |
Summary: Activated RasC physically associates with the mTORC2 machinery and RacE within a signaling supercomplex.
Reason: Bare "protein binding" is uninformative; the functional interaction (RasC-RacE-mTORC2 supercomplex, RasC-TOR binding) is better captured by the TORC2-binding and TORC2-activation terms.
Supporting Evidence:
PMID:31263268
assembles the RacE-RasC-mTORC2 supercomplex that phosphorylates AKT
|
|
GO:0007265
Ras protein signal transduction
|
IMP
PMID:15878331 Loss of the Dictyostelium RasC protein alters vegetative cel... |
ACCEPT |
Summary: RasC-mediated signal transduction affects motility, polarity, endocytosis, and chemotactic responses in vegetative and developing cells.
Reason: Ras protein signal transduction is the core process RasC executes as a signaling GTPase.
Supporting Evidence:
PMID:15878331
loss of signal transduction through the RasC protein was found to
|
|
GO:0007265
Ras protein signal transduction
|
IMP
PMID:20660630 Ras-mediated activation of the TORC2-PKB pathway is critical... |
ACCEPT |
Summary: RasC signal transduction controls the TORC2-PKB pathway governing chemotaxis.
Reason: Directly supported - RasC is the upstream Ras controlling TORC2-PKB signaling during chemotaxis.
Supporting Evidence:
PMID:20660630
RasC is required for TORC2-mediated activation of PKB
|
|
GO:0106070
regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway
|
IMP
PMID:11500376 RasC is required for optimal activation of adenylyl cyclase ... |
ACCEPT |
Summary: RasC regulates cAMP-receptor-mediated activation of adenylyl cyclase; rasC-null cells fail to produce cAMP in response to receptor stimulation.
Reason: Regulation of the adenylyl-cyclase-activating GPCR pathway is a core RasC function underlying the cAMP relay during aggregation.
Supporting Evidence:
PMID:11500376
RasC appears to be a central regulatory molecule acting downstream of serpentine receptor stimulation by cAMP that is required for two distinct effector pathways: the activation of Akt/PKB through PI3K and the activation of adenylyl cyclase.
|
|
GO:0005515
protein binding
|
IPI
PMID:24986648 Regulation of a LATS-homolog by Ras GTPases is important for... |
KEEP AS NON CORE |
Summary: Activated RasC binds the LATS-family kinase NdrC via its Ras-binding domain (lower affinity than RasG/RasB).
Reason: Documents a specific RasC-NdrC interaction, but as bare "protein binding" it is uninformative; the cytokinesis phenotype is driven by RasG/RasB, not RasC.
Supporting Evidence:
PMID:24986648
NdrC was the only protein that bound RasC in the yeast two-hybrid screen
|
|
GO:0005515
protein binding
|
IPI
PMID:26424797 PP2A/B56 and GSK3/Ras suppress PKB activity during Dictyoste... |
KEEP AS NON CORE |
Summary: The PP2A regulatory subunit B56 preferentially associates with the GDP-bound form of RasC (and RasD), part of a phosphatase-mediated negative regulation of PKB.
Reason: A real interaction, but "protein binding" is uninformative; the functional significance is regulatory (PP2A/B56 modulating Ras and PKB activity).
Supporting Evidence:
PMID:26424797
GDP forms of RasC and RasD, but not with RasG in vitro
|
|
GO:0005515
protein binding
|
IPI
PMID:27172998 The small GTPases Ras and Rap1 bind to and control TORC2 act... |
KEEP AS NON CORE |
Summary: Active RasC binds directly to the catalytic (FRB/kinase) domain of TOR, the proposed mechanism by which RasC activates TORC2.
Reason: This specific RasC-TOR interaction is functionally important but is better represented by TORC2-binding/activation terms than by generic "protein binding".
Supporting Evidence:
PMID:27172998
we found that TOR kinase itself specifically co-purifies with RasCGppNHp
|
|
GO:0005515
protein binding
|
IPI
PMID:29109256 GPCR-controlled membrane recruitment of negative regulator C... |
KEEP AS NON CORE |
Summary: The negative regulator C2GAP1 (a RasGAP) binds RasC in vitro, consistent with its role in terminating Ras signaling for adaptation.
Reason: Documents a RasC-C2GAP1 interaction; bare "protein binding" is uninformative relative to the GAP-mediated regulation it represents.
Supporting Evidence:
PMID:29109256
the in vitro binding assay indicates that C2GAP1 binds both GTP- and GDP-bound Ras protein
|
|
GO:0005525
GTP binding
|
IDA
PMID:15143344 Chemoattractant-induced Ras activation during Dictyostelium ... |
ACCEPT |
Summary: RasC binds and is activated by GTP; an RBD-based assay directly detected GTP-loaded (active) RasC upon cAMP stimulation.
Reason: Direct experimental demonstration of RasC nucleotide binding/activation supports the GTP-binding molecular function.
Supporting Evidence:
PMID:15143344
it was shown that RasC was activated in aggregation-competent cells in response to cAMP
|
|
GO:0005811
lipid droplet
|
HDA
PMID:24036346 Dictyostelium lipid droplets host novel proteins. |
MARK AS OVER ANNOTATED |
Summary: RasC was recovered in a high-throughput lipid-droplet proteome, but its established localization is the plasma membrane/leading edge; lipid-droplet association likely reflects the shared lipid-anchor/membrane biochemistry rather than a functional role.
Reason: High-throughput organelle proteomes frequently capture membrane-anchored proteins as background. There is no functional evidence for RasC acting at lipid droplets, whose biology is unrelated to Ras chemotactic signaling.
Supporting Evidence:
PMID:24036346
Among the novel protein components are LdpA, a protein specific to Dictyostelium
|
|
GO:0010856
adenylate cyclase activator activity
|
IGI
PMID:18180289 Rap1 activation in response to cAMP occurs downstream of ras... |
ACCEPT |
Summary: RasC (with RasG) is required for cAMP-receptor-mediated activation of adenylyl cyclase during aggregation, with RasC being the more important of the two for ACA activation.
Reason: Activation of adenylyl cyclase is a core RasC function underlying the cAMP relay; RasC/RasG are the presumptive GTPases required for cyclase activation.
Supporting Evidence:
PMID:18180289
proteins that are necessary for optimum cAMP signaling
PMID:17380187
RasG regulates chemotaxis and RasC is responsible for adenylyl cyclase activation
|
|
GO:0030250
guanylate cyclase activator activity
|
IMP
PMID:18180289 Rap1 activation in response to cAMP occurs downstream of ras... |
KEEP AS NON CORE |
Summary: In vitro guanylyl cyclase activation is abolished in rasC-/rasG- cells, identifying RasC/RasG as required for cyclase activation; however, RasG predominates for the cGMP branch.
Reason: RasC contributes to guanylyl cyclase activation but this is largely a RasG-dominated function and secondary to RasC's principal ACA/TORC2 roles.
Supporting Evidence:
PMID:18180289
guanylyl cyclase activation is also abolished in the
|
|
GO:0030250
guanylate cyclase activator activity
|
IGI
PMID:18180289 Rap1 activation in response to cAMP occurs downstream of ras... |
KEEP AS NON CORE |
Summary: Genetic-interaction evidence that RasC (with RasG) is required for guanylyl cyclase activation; duplicate of the IMP annotation.
Reason: Same rationale as the paired IMP annotation - a redundant, RasG-dominated function.
Supporting Evidence:
PMID:18180289
guanylyl cyclase activation is also abolished in the
|
|
GO:0031252
cell leading edge
|
IC
PMID:20493808 A Ras signaling complex controls the RasC-TORC2 pathway and ... |
ACCEPT |
Summary: Active RasC signaling (RasC-TORC2) is localized to the leading edge of chemotaxing cells, where the Sca1/RasGEF complex promotes local RasC activation.
Reason: Leading-edge localization of active RasC signaling is a core spatial feature underlying directed migration.
Supporting Evidence:
PMID:20493808
active Ras is enriched at the leading edge of chemotaxing cells
|
|
GO:0031982
vesicle
|
IDA
PMID:19589376 Nanovesicles released by Dictyostelium cells: a potential ca... |
MARK AS OVER ANNOTATED |
Summary: RasC was detected among proteins of secreted Dictyostelium nanovesicles (a proteome dominated by actin and endosomal markers); this does not reflect a functional vesicle role.
Reason: Recovery in a released-nanovesicle proteome is expected for a membrane-anchored protein and does not indicate a dedicated vesicle function; RasC acts at the plasma membrane/leading edge.
Supporting Evidence:
PMID:19589376
A proteomic analysis reveals a predominance of actin and actin-related proteins.
|
|
GO:0051602
response to electrical stimulus
|
IMP
PMID:26012633 A large-scale screen reveals genes that mediate electrotaxis... |
KEEP AS NON CORE |
Summary: rasC was identified among genes affecting electrotaxis in a large-scale screen; the specific mechanistic role is not defined.
Reason: A screen-level hit indicating involvement in electrotaxis, but peripheral to RasC's characterized core functions and without detailed mechanistic support in the accessible text.
|
|
GO:1904841
TORC2 complex binding
|
IDA
PMID:20660630 Ras-mediated activation of the TORC2-PKB pathway is critical... |
ACCEPT |
Summary: TORC2 binds specifically to the activated (GTP-bound) form of RasC, as shown by co-immunoprecipitation with the TORC2 component Rip3.
Reason: Direct binding of activated RasC to TORC2 is a core molecular function central to RasC-mediated PKB activation and chemotaxis.
Supporting Evidence:
PMID:20660630
This result shows that RasC and TORC2 interact in a regulated fashion
|
|
GO:0005515
protein binding
|
IPI
PMID:27009206 The novel RacE-binding protein GflB sharpens Ras activity at... |
KEEP AS NON CORE |
Summary: The RacE-binding, RhoGAP/RasGEF-domain protein GflB binds RasC (and RasG), linking directional sensing to Ras/Rho activity at the leading edge.
Reason: A real RasC-GflB interaction, but bare "protein binding" is uninformative and GflB's characterized activity is chiefly on RasG/Rac.
Supporting Evidence:
PMID:27009206
GflB also binds to Ras GTPases
|
|
GO:0110094
polyphosphate-mediated signaling
|
IMP
PMID:28584190 Extracellular polyphosphate signals through Ras and Akt to p... |
KEEP AS NON CORE |
Summary: RasC (with Akt/PKB) mediates extracellular-polyphosphate signaling that primes cells for development and inhibits the proteasome.
Reason: RasC participates in polyphosphate signaling, but this is a specialized branch secondary to its core aggregation and TORC2 roles.
Supporting Evidence:
PMID:28584190
mediated by Akt proteins and RasC in Dictyostelium
|
|
GO:0051897
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
|
IMP
PMID:20660630 Ras-mediated activation of the TORC2-PKB pathway is critical... |
ACCEPT |
Summary: RasC positively regulates PKB activation, primarily through TORC2-mediated phosphorylation of PKBR1/PKBA (largely PIP3-independent).
Reason: Positive regulation of PKB signaling is a core RasC output; RasC deletion reduces, and activated RasC prolongs, PKB phosphorylation.
Supporting Evidence:
PMID:20660630
RasC is required for TORC2-mediated activation of PKB
|
|
GO:0061122
positive regulation of positive chemotaxis to cAMP
|
IMP
PMID:20660630 Ras-mediated activation of the TORC2-PKB pathway is critical... |
KEEP AS NON CORE |
Summary: Proper temporal control of RasC-TORC2-PKBR1 signaling is required for efficient directed migration toward cAMP; dysregulated RasC impairs chemotaxis.
Reason: RasC contributes to cAMP chemotaxis via TORC2, but chemotactic gradient sensing is dominated by RasG/PI3K; RasC's contribution here is modulatory.
Supporting Evidence:
PMID:20660630
RasC is required for TORC2-mediated activation of PKB
|
|
GO:1904515
positive regulation of TORC2 signaling
|
IMP
PMID:20660630 Ras-mediated activation of the TORC2-PKB pathway is critical... |
ACCEPT |
Summary: RasC is required for and, when constitutively active, prolongs TORC2-mediated PKB signaling.
Reason: Positive regulation of TORC2 is a core RasC function established by genetic and in vitro reconstitution evidence.
Supporting Evidence:
PMID:20660630
RasC is required for TORC2-mediated activation of PKB
|
|
GO:0048870
cell motility
|
IMP
PMID:15878331 Loss of the Dictyostelium RasC protein alters vegetative cel... |
KEEP AS NON CORE |
Summary: Vegetative rasC-null cells show reduced random motility and are less polarized, indicating a role for RasC in cell motility.
Reason: RasC affects motility, but the dominant motility/polarity regulator among the Ras proteins is RasG; RasC's contribution is partial.
Supporting Evidence:
PMID:15878331
reduced random motility, were less polarized and had altered F-actin
|
|
GO:0019954
asexual reproduction
|
IGI
PMID:18180289 Rap1 activation in response to cAMP occurs downstream of ras... |
KEEP AS NON CORE |
Summary: RasC is required (with RasG) for aggregation, the developmental process that leads to asexual sporulation.
Reason: The link to asexual reproduction is via RasC's role in aggregation/cAMP signaling rather than a distinct reproductive function.
Supporting Evidence:
PMID:18180289
proteins that are necessary for optimum cAMP signaling
|
|
GO:0043326
chemotaxis to folate
|
IGI
PMID:20833893 Ras proteins have multiple functions in vegetative cells of ... |
KEEP AS NON CORE |
Summary: RasC can partially substitute for RasG in folate chemotaxis; rasC-/rasG- cells are completely incapable of folate chemotaxis.
Reason: RasC contributes to folate chemotaxis but redundantly with (and secondarily to) RasG.
Supporting Evidence:
PMID:20833893
to folate, RasC is capable of partially substituting for RasG
|
|
GO:0043327
chemotaxis to cAMP
|
IGI
PMID:18180289 Rap1 activation in response to cAMP occurs downstream of ras... |
KEEP AS NON CORE |
Summary: RasC (with RasG) is required for optimal cAMP signaling that underlies chemotaxis during aggregation.
Reason: RasC contributes to cAMP chemotaxis but the chemotactic branch is predominantly RasG-dependent; RasC's core role is ACA activation.
Supporting Evidence:
PMID:18180289
proteins that are necessary for optimum cAMP signaling
|
|
GO:0051897
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
|
IGI
PMID:18180289 Rap1 activation in response to cAMP occurs downstream of ras... |
ACCEPT |
Summary: RasC (with RasG) acts upstream of PKB activation during cAMP signaling.
Reason: Positive regulation of PKB activation is a core RasC output during cAMP signaling, consistent with the reduced PKB phosphorylation of rasC-null cells.
Supporting Evidence:
PMID:18180289
proteins that are necessary for optimum cAMP signaling
|
|
GO:0031152
aggregation involved in sorocarp development
|
IMP
PMID:16885420 Delineation of the roles played by RasG and RasC in cAMP-dep... |
ACCEPT |
Summary: RasC is required for aggregation, controlling both cAMP relay (ACA activation) and, partly, chemotaxis during early development.
Reason: Aggregation is a core developmental process requiring RasC; rasC-null cells fail to aggregate.
Supporting Evidence:
PMID:16885420
the Ras protein RasC is involved in both processes
|
|
GO:0031152
aggregation involved in sorocarp development
|
IGI
PMID:16885420 Delineation of the roles played by RasG and RasC in cAMP-dep... |
ACCEPT |
Summary: Genetic-interaction evidence (RasC vs RasG) confirming RasC's role in aggregation, predominantly via ACA activation.
Reason: Duplicate line of evidence for RasC's core aggregation function.
Supporting Evidence:
PMID:16885420
signal transduction through RasC is more important in ACA activation
|
|
GO:0043327
chemotaxis to cAMP
|
IMP
PMID:16885420 Delineation of the roles played by RasG and RasC in cAMP-dep... |
KEEP AS NON CORE |
Summary: RasC contributes to cAMP chemotaxis, though signaling through RasG is more important for chemotaxis while RasC is more important for the cAMP relay.
Reason: RasC's chemotactic contribution is secondary to RasG; its core role is ACA activation.
Supporting Evidence:
PMID:16885420
signal transduction through RasC is more important in ACA activation
|
|
GO:0051897
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
|
IMP
PMID:16885420 Delineation of the roles played by RasG and RasC in cAMP-dep... |
ACCEPT |
Summary: RasC contributes to cAMP-stimulated PKB phosphorylation during aggregation.
Reason: Positive regulation of PKB is a core RasC output; this is consistent supporting evidence from the isogenic RasC/RasG null comparison.
Supporting Evidence:
PMID:16885420
signal transduction through RasC is more important in ACA activation
|
|
GO:0051897
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
|
IGI
PMID:16885420 Delineation of the roles played by RasG and RasC in cAMP-dep... |
ACCEPT |
Summary: Genetic-interaction evidence that RasC contributes to PKB activation during aggregation.
Reason: Positive regulation of PKB is a core RasC output; consistent supporting evidence.
Supporting Evidence:
PMID:16885420
signal transduction through RasC is more important in ACA activation
|
|
GO:0051897
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
|
IMP
PMID:11500376 RasC is required for optimal activation of adenylyl cyclase ... |
ACCEPT |
Summary: cAMP-induced Akt/PKB phosphorylation through a PI3K-dependent pathway is dramatically reduced in rasC-null cells.
Reason: RasC positively regulating PKB activation is a core function, directly demonstrated by reduced Akt/PKB phosphorylation in rasC-null cells.
Supporting Evidence:
PMID:11500376
RasC appears to be a central regulatory molecule acting downstream of serpentine receptor stimulation by cAMP that is required for two distinct effector pathways: the activation of Akt/PKB through PI3K and the activation of adenylyl cyclase.
|
|
GO:0031152
aggregation involved in sorocarp development
|
IMP
PMID:16023096 The effect of the disruption of a gene encoding a PI4 kinase... |
ACCEPT |
Summary: Disruption of rasC produces a strain that fails to aggregate, with defects in both cAMP signal relay and chemotaxis.
Reason: Core developmental phenotype - RasC is required for aggregation.
Supporting Evidence:
PMID:16023096
fails to aggregate with defects in both cAMP
|
|
GO:0043327
chemotaxis to cAMP
|
IMP
PMID:16023096 The effect of the disruption of a gene encoding a PI4 kinase... |
KEEP AS NON CORE |
Summary: rasC-null cells are defective in cAMP chemotaxis (as part of the aggregation-negative phenotype).
Reason: RasC contributes to cAMP chemotaxis but redundantly with/secondarily to RasG; its core role is ACA activation.
Supporting Evidence:
PMID:16023096
fails to aggregate with defects in both cAMP
|
|
GO:0001558
regulation of cell growth
|
IMP
PMID:15878331 Loss of the Dictyostelium RasC protein alters vegetative cel... |
KEEP AS NON CORE |
Summary: rasC-null cells contain more protein and are larger than wild type, indicating a role for RasC in regulating cell size/growth.
Reason: RasC influences vegetative cell size, but this is one of several secondary vegetative-cell phenotypes rather than a core function.
Supporting Evidence:
PMID:15878331
Cells lacking RasC also contained more protein and were larger in
|
|
GO:0051491
positive regulation of filopodium assembly
|
IMP
PMID:15878331 Loss of the Dictyostelium RasC protein alters vegetative cel... |
KEEP AS NON CORE |
Summary: Loss of RasC alters F-actin distribution and cell polarity, consistent with a role in actin-based protrusion regulation; the abstract does not specifically detail filopodium assembly.
Reason: RasC affects the actin cytoskeleton and protrusions, but a specific filopodium-assembly function is a minor aspect and only indirectly supported by the accessible abstract.
Supporting Evidence:
PMID:15878331
reduced random motility, were less polarized and had altered F-actin
|
|
GO:0007163
establishment or maintenance of cell polarity
|
IMP
PMID:15878331 Loss of the Dictyostelium RasC protein alters vegetative cel... |
KEEP AS NON CORE |
Summary: rasC-null cells are less polarized, indicating a role for RasC in cell polarity.
Reason: RasC contributes to polarity/actin organization but is not the dominant polarity regulator among Dictyostelium Ras proteins.
Supporting Evidence:
PMID:15878331
reduced random motility, were less polarized and had altered F-actin
|
|
GO:0030036
actin cytoskeleton organization
|
IMP
PMID:15878331 Loss of the Dictyostelium RasC protein alters vegetative cel... |
KEEP AS NON CORE |
Summary: Loss of RasC alters F-actin distribution, linking RasC signaling to actin cytoskeleton organization.
Reason: RasC influences the actin cytoskeleton (via TORC2-PKB and downstream effectors), a secondary consequence of its signaling rather than a direct core function.
Supporting Evidence:
PMID:15878331
reduced random motility, were less polarized and had altered F-actin
|
|
GO:0043326
chemotaxis to folate
|
IMP
PMID:15878331 Loss of the Dictyostelium RasC protein alters vegetative cel... |
KEEP AS NON CORE |
Summary: rasC-null cells chemotax poorly to folate and show reduced folate-induced F-actin and PKB responses.
Reason: RasC contributes to folate chemotaxis but redundantly with RasG; this is a vegetative-cell role secondary to RasC's core aggregation/ACA function.
Supporting Evidence:
PMID:15878331
chemotaxed poorly to folate
|
|
GO:0120320
lateral pseudopodium retraction
|
IMP
PMID:15878331 Loss of the Dictyostelium RasC protein alters vegetative cel... |
UNDECIDED |
Summary: This specific term (lateral pseudopodium retraction) is not addressed in the accessible (abstract-only) record for this reference, which reports reduced polarity and altered F-actin but not pseudopod retraction dynamics per se.
Reason: The cached publication is abstract-only and does not provide verifiable support for a specific lateral-pseudopodium-retraction function; the curator likely relied on full-text data not accessible here.
|
|
GO:0031152
aggregation involved in sorocarp development
|
IMP
PMID:11500376 RasC is required for optimal activation of adenylyl cyclase ... |
ACCEPT |
Summary: Disruption of rasC generates cells incapable of aggregation, a defect restricted to the aggregation stage and rescuable by exogenous cAMP pulses.
Reason: RasC's requirement for aggregation is a core developmental function directly demonstrated by the rasC-null phenotype.
Supporting Evidence:
PMID:11500376
generated cells incapable of aggregation
|
id: P32253
gene_symbol: rasC
product_type: PROTEIN
status: COMPLETE
taxon:
id: NCBITaxon:44689
label: Dictyostelium discoideum
description: >-
RasC is a member of the Ras subfamily of small monomeric GTPases in the social
amoeba Dictyostelium discoideum. Like other Ras proteins, it cycles between an
inactive GDP-bound and an active GTP-bound state, possesses intrinsic GTPase
activity (EC 3.6.5.2), and is post-translationally prenylated at a C-terminal
geranylgeranyl cysteine that anchors it to the cytoplasmic face of the plasma
membrane. RasC is activated in response to extracellular cAMP sensed through
G-protein-coupled cAMP receptors, via its dedicated guanine-nucleotide exchange
factor RasGEFA (Aimless). Together with the partly redundant paralog RasG, RasC
is a central regulator of early development. It is required for aggregation, where
it preferentially controls activation of adenylyl cyclase (ACA) and the cAMP relay,
and it is the principal Ras that activates the TORC2-PKB (Akt/PKBR1) pathway,
binding the catalytic domain of TOR and forming a hetero-oligomer with
phosphorylated GDP-bound RacE to stimulate mTORC2-mediated AKT phosphorylation.
Through TORC2-PKB signaling, active RasC, enriched at the leading edge of
chemotaxing cells, sets the temporal and spatial dynamics of the actin
cytoskeleton, pseudopod formation, and directed cell migration. RasC also
participates in additional Ras-dependent responses including folate chemotaxis and
polyphosphate signaling, and it interacts with effectors and regulators such as the
LATS-family kinase NdrC, the RasGAP C2GAP1, and the scaffold-associated RasGEF
complex.
existing_annotations:
- term:
id: GO:0003924
label: GTPase activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: enables
review:
summary: RasC is a Ras-family small GTPase with intrinsic GTPase activity that hydrolyzes
bound GTP; this is a core molecular function conserved across the Ras subfamily.
action: ACCEPT
reason: Intrinsic GTPase activity is a defining, well-supported feature of Ras subfamily
proteins and is consistent with the UniProt record (EC 3.6.5.2) and the biochemical
framing of RasC as a GDP/GTP molecular switch.
supported_by:
- reference_id: PMID:15143344
supporting_text: the subsequent inactivation is due to an enhancement of the intrinsic
GTPase activity, which is stimulated by the GTPase-activating proteins (GAPs)
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: is_active_in
review:
summary: RasC is a prenylated (geranylgeranylated) protein anchored to the plasma
membrane, where activated RasC is enriched at the leading edge of chemotaxing cells.
action: ACCEPT
reason: Plasma-membrane localization is expected for a lipid-anchored Ras GTPase and
is consistent with the leading-edge enrichment of active Ras in migrating cells.
supported_by:
- reference_id: PMID:20493808
supporting_text: active Ras is enriched at the leading edge of chemotaxing cells
- term:
id: GO:0007264
label: small GTPase-mediated signal transduction
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: involved_in
review:
summary: RasC functions as a small GTPase molecular switch transducing extracellular
(chemoattractant) signals to downstream effector pathways.
action: ACCEPT
reason: This is the core biological process for RasC, which relays G-protein-coupled
receptor signals to adenylyl cyclase and the TORC2-PKB pathway.
supported_by:
- reference_id: PMID:17380187
supporting_text: Ras proteins are small, monomeric GTPases that act as crucial regulators
of a number of cellular signalling pathways
- term:
id: GO:0000281
label: mitotic cytokinesis
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: involved_in
review:
summary: This phylogenetic (IBA) inference of a cytokinesis role is contradicted by
direct experimental evidence in Dictyostelium, where loss of RasC leaves cytokinesis
and the division rate essentially normal.
action: REMOVE
propagation_review:
root_cause: PROPAGATION_BAD
failure_modes:
- WRONG_ORTHOLOG_OR_PARALOG
source_entities:
- source_id: PANTHER:PTN001177391
source_label: "PANTHER node for the Ras small-GTPase family"
source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
comment: "Mitotic cytokinesis in Dictyostelium is the role of RasG; the term is over-propagated across Ras paralogs to RasC"
- source_id: dictyBase:DDB_G0293434
source_label: "Dictyostelium Ras-family paralog (RasG-type)"
source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
comment: "Cytokinesis function belongs to RasG, not RasC"
reason: The IBA annotation is over-propagated from Ras-family members that function
in cytokinesis. In Dictyostelium, cytokinesis is regulated mainly by RasG/RasB (via
NdrC), whereas rasC-null cells divide normally, so this term does not represent RasC
function.
supported_by:
- reference_id: PMID:15878331
supporting_text: there was no change in the rate of cell division
- term:
id: GO:0044351
label: macropinocytosis
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: involved_in
review:
summary: The IBA macropinocytosis inference is not supported for RasC; in Dictyostelium,
RasG is the Ras protein that promotes macropinocytosis, and loss of RasC actually
increases fluid-phase endocytosis rather than reducing it.
action: MARK_AS_OVER_ANNOTATED
propagation_review:
root_cause: PROPAGATION_BAD
failure_modes:
- WRONG_ORTHOLOG_OR_PARALOG
source_entities:
- source_id: PANTHER:PTN001177391
source_label: "PANTHER node for the Ras small-GTPase family"
source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
comment: "Macropinocytosis is driven by other Dictyostelium Ras paralogs such as RasG and RasS; rasC-null cells show increased macropinocytosis, so the positive role does not belong to RasC"
- source_id: dictyBase:DDB_G0293434
source_label: "Dictyostelium Ras-family paralog"
source_status: SUPPORTS_SOURCE_BUT_NOT_TARGET
comment: "Macropinocytosis role belongs to a different Ras paralog subfamily, not RasC"
reason: RasC does not positively drive macropinocytosis; rasC-null cells show increased
liquid-phase endocytosis. The term is over-propagated from RasG-like family members.
supported_by:
- reference_id: PMID:15878331
supporting_text: Cells lacking RasC also contained more protein and were larger in
- term:
id: GO:0003925
label: G protein activity
evidence_type: IEA
original_reference_id: GO_REF:0000003
qualifier: enables
review:
summary: RasC is a small monomeric GTPase (G protein), consistent with the EC 3.6.5.2
mapping used for this electronic annotation.
action: ACCEPT
reason: RasC is a bona fide Ras-family small GTPase functioning as a nucleotide-dependent
molecular switch; the EC-to-GO mapping is appropriate.
supported_by:
- reference_id: PMID:15143344
supporting_text: The Ras subfamily consists of small, monomeric GTPases that act as
molecular switches in cellular signalling events
- term:
id: GO:0005525
label: GTP binding
evidence_type: IEA
original_reference_id: GO_REF:0000002
qualifier: enables
review:
summary: RasC binds guanine nucleotides (GTP/GDP), cycling between active GTP-bound
and inactive GDP-bound states.
action: ACCEPT
reason: GTP binding is a defining feature of Ras GTPases and is directly supported
by the demonstration that RasC is activated (GTP-loaded) in response to cAMP.
supported_by:
- reference_id: PMID:15143344
supporting_text: it was shown that RasC was activated in aggregation-competent cells
in response to cAMP
- term:
id: GO:0003924
label: GTPase activity
evidence_type: IEA
original_reference_id: GO_REF:0000002
qualifier: enables
review:
summary: InterPro2GO inference of GTPase activity from the small-GTPase domain; correct
and consistent with the IBA GTPase annotation.
action: ACCEPT
reason: RasC possesses intrinsic GTPase activity as a Ras-family small GTPase.
supported_by:
- reference_id: PMID:15143344
supporting_text: the subsequent inactivation is due to an enhancement of the intrinsic
GTPase activity, which is stimulated by the GTPase-activating proteins (GAPs)
- term:
id: GO:0005886
label: plasma membrane
evidence_type: IEA
original_reference_id: GO_REF:0000044
qualifier: located_in
review:
summary: UniProt subcellular-location mapping to plasma membrane, consistent with the
C-terminal prenyl (geranylgeranyl) lipid anchor and leading-edge localization of
active RasC.
action: ACCEPT
reason: Membrane localization is expected for a lipid-anchored Ras GTPase; this duplicates
the IBA plasma membrane annotation.
supported_by:
- reference_id: PMID:20493808
supporting_text: active Ras is enriched at the leading edge of chemotaxing cells
- term:
id: GO:0007165
label: signal transduction
evidence_type: IEA
original_reference_id: GO_REF:0000002
qualifier: involved_in
review:
summary: General signal transduction term consistent with RasC's role as a signaling
GTPase; correct but non-specific relative to more informative child terms.
action: ACCEPT
reason: RasC is a signaling molecular switch; the term is accurate though general.
supported_by:
- reference_id: PMID:11500376
supporting_text: RasC appears to function as a regulatory molecule for both the cAMP
relay and the chemotactic response to cAMP.
- term:
id: GO:0016020
label: membrane
evidence_type: IEA
original_reference_id: GO_REF:0000002
qualifier: located_in
review:
summary: Generic membrane localization term, redundant with the more specific plasma
membrane annotation.
action: KEEP_AS_NON_CORE
reason: The parent term "membrane" is correct but uninformative given the specific
plasma membrane localization of prenylated RasC.
supported_by:
- reference_id: PMID:20493808
supporting_text: active Ras is enriched at the leading edge of chemotaxing cells
- term:
id: GO:0071321
label: cellular response to cGMP
evidence_type: IGI
original_reference_id: PMID:18180289
qualifier: acts_upstream_of_or_within
review:
summary: RasC (with RasG) is required for cAMP-induced guanylyl cyclase activation
during aggregation; the connection to cGMP responses is indirect and predominantly
through RasG.
action: KEEP_AS_NON_CORE
reason: The genetic evidence links RasC/RasG to guanylyl cyclase activation, but cGMP
signaling is predominantly a RasG function and is peripheral to RasC's core role
in ACA and TORC2 activation.
supported_by:
- reference_id: PMID:18180289
supporting_text: guanylyl cyclase activation is also abolished in the
- term:
id: GO:0019887
label: protein kinase regulator activity
evidence_type: IDA
original_reference_id: PMID:15878331
qualifier: enables
review:
summary: RasC positively regulates the activity of the PKB/Akt kinases (via TORC2),
reflected in reduced Akt/PKB and ERK2 phosphorylation in rasC-null cells.
action: KEEP_AS_NON_CORE
reason: RasC regulates downstream protein kinases indirectly (through TORC2), so a
general "protein kinase regulator activity" molecular function is defensible but
less informative than its GTPase/TORC2-activation functions.
supported_by:
- reference_id: PMID:15878331
supporting_text: ERK2 phosphorylation and reduced Akt/PKB phosphorylation in response
to folate
- term:
id: GO:0043491
label: phosphatidylinositol 3-kinase/protein kinase B signal transduction
evidence_type: IMP
original_reference_id: PMID:15878331
qualifier: acts_upstream_of_or_within
review:
summary: RasC acts upstream of the PI3K/PKB (Akt) pathway; loss of RasC reduces Akt/PKB
phosphorylation in response to chemoattractant.
action: ACCEPT
reason: RasC is a genuine upstream activator of PKB signaling (chiefly via TORC2),
a core aspect of its function during chemotaxis and aggregation.
supported_by:
- reference_id: PMID:15878331
supporting_text: ERK2 phosphorylation and reduced Akt/PKB phosphorylation in response
to folate
- reference_id: PMID:11500376
supporting_text: 'RasC appears to be a central regulatory molecule acting downstream
of serpentine receptor stimulation by cAMP that is required for two distinct effector
pathways: the activation of Akt/PKB through PI3K and the activation of adenylyl
cyclase.'
- term:
id: GO:0140986
label: G protein-coupled chemorepellent receptor signaling pathway
evidence_type: IGI
original_reference_id: PMID:30462573
qualifier: involved_in
review:
summary: RasC (redundantly with RasG) is required for AprA chemorepellent responses;
rasC-/rasG- double mutants fail to move away from AprA.
action: KEEP_AS_NON_CORE
reason: The chemorepulsion role is genuine but redundant with RasG and peripheral to
RasC's principal roles in ACA and TORC2 activation.
supported_by:
- reference_id: PMID:30462573
supporting_text: signal transduction pathways including Ras
- term:
id: GO:0000165
label: MAPK cascade
evidence_type: IMP
original_reference_id: PMID:15878331
qualifier: involved_in
review:
summary: RasC influences ERK2/MAPK phosphorylation in a context-dependent manner (reduced
in response to folate), although for cAMP relay ERK2 activation is RasC-independent.
action: KEEP_AS_NON_CORE
reason: The MAPK role is context-dependent and not RasC's core output; during cAMP
relay, cAMP-induced ERK2 phosphorylation is unaffected in rasC-null cells.
supported_by:
- reference_id: PMID:15878331
supporting_text: ERK2 phosphorylation and reduced Akt/PKB phosphorylation in response
to folate
- term:
id: GO:0031932
label: TORC2 complex
evidence_type: IDA
original_reference_id: PMID:31263268
qualifier: part_of
review:
summary: Activated RasC associates with TORC2 by binding TOR and by forming a RacE-RasC-mTORC2
supercomplex, but RasC is a regulatory GTPase rather than a stoichiometric core subunit
of TORC2.
action: KEEP_AS_NON_CORE
reason: RasC transiently binds and activates TORC2 rather than being a constitutive
subunit, so the part_of relationship overstates the association. The functional binding
and activation are better captured by the TORC2-binding and positive-regulation terms.
supported_by:
- reference_id: PMID:31263268
supporting_text: assembles the RacE-RasC-mTORC2 supercomplex that phosphorylates AKT
- term:
id: GO:1904515
label: positive regulation of TORC2 signaling
evidence_type: IDA
original_reference_id: PMID:31263268
qualifier: involved_in
review:
summary: GTP-bound RasC, together with phosphorylated GDP-RacE, directly stimulates
mTORC2 kinase activity toward AKT.
action: ACCEPT
reason: Positive regulation of TORC2 is a core RasC function, demonstrated by in vitro
reconstitution of RasC-dependent mTORC2-mediated AKT phosphorylation.
supported_by:
- reference_id: PMID:31263268
supporting_text: assembles the RacE-RasC-mTORC2 supercomplex that phosphorylates AKT
- term:
id: GO:0051593
label: response to folic acid
evidence_type: IGI
original_reference_id: PMID:23132928
qualifier: involved_in
review:
summary: RasC contributes to folic-acid-stimulated responses in vegetative cells, notably
PKB substrate phosphorylation, via the TORC2 pathway.
action: KEEP_AS_NON_CORE
reason: RasC participates in folate-triggered signaling but this is one of several redundant
vegetative-cell roles, secondary to its core aggregation/ACA and TORC2 functions.
supported_by:
- reference_id: PMID:23132928
supporting_text: Ras C activates the TORC2 complex, which in turn triggers PKBA and
a second PKB homolog, PKBR1
- term:
id: GO:0007165
label: signal transduction
evidence_type: IMP
original_reference_id: PMID:11500376
qualifier: involved_in
review:
summary: RasC is a signaling GTPase required for cAMP relay and chemotactic responses
during aggregation.
action: ACCEPT
reason: Signal transduction is accurate for RasC, supported by the aggregation-defective
phenotype of rasC-null cells and their role in cAMP signaling.
supported_by:
- reference_id: PMID:11500376
supporting_text: RasC appears to function as a regulatory molecule for both the cAMP
relay and the chemotactic response to cAMP.
- term:
id: GO:0007188
label: adenylate cyclase-modulating G protein-coupled receptor signaling pathway
evidence_type: IMP
original_reference_id: PMID:15143344
qualifier: involved_in
review:
summary: RasC is activated downstream of the cAMP GPCR and is required for chemoattractant-induced
activation of adenylyl cyclase (the cAMP relay).
action: ACCEPT
reason: This is a core function of RasC - transducing cAMP-receptor signals to adenylyl
cyclase during aggregation.
supported_by:
- reference_id: PMID:15143344
supporting_text: it was shown that RasC was activated in aggregation-competent cells
in response to cAMP
- reference_id: PMID:17380187
supporting_text: RasG regulates chemotaxis and RasC is responsible for adenylyl cyclase
activation
- term:
id: GO:1903665
label: negative regulation of asexual reproduction
evidence_type: IMP
original_reference_id: PMID:34154396
qualifier: acts_upstream_of_or_within
review:
summary: RasC is required for extracellular-polyphosphate-mediated inhibition of cell
proliferation under low-nutrient conditions.
action: KEEP_AS_NON_CORE
reason: RasC participates in the polyphosphate proliferation-inhibition pathway, but
this is a specialized, redundant signaling role distinct from its core aggregation/TORC2
functions.
supported_by:
- reference_id: PMID:34154396
supporting_text: the loss of GrlD or RasC blocked the sensitivity of cells to polyphosphate
- term:
id: GO:0051291
label: protein heterooligomerization
evidence_type: IDA
original_reference_id: PMID:33238110
qualifier: involved_in
review:
summary: Chemoattractant stimulation induces GTP-bound RasC to hetero-oligomerize with
phosphorylated GDP-bound RacE, an interaction required for mTORC2-AKT activation.
action: KEEP_AS_NON_CORE
reason: The RasC-RacE hetero-oligomerization is a genuine, directly demonstrated interaction,
but it is a mechanistic step in TORC2 activation rather than a stand-alone core function.
supported_by:
- reference_id: PMID:33238110
supporting_text: these two GTPases directly interact in cells
- term:
id: GO:0003925
label: G protein activity
evidence_type: IDA
original_reference_id: PMID:17380187
qualifier: enables
review:
summary: RasC is a small GTPase whose GDP-to-GTP exchange is catalyzed specifically
by RasGEFA, confirming its function as a nucleotide-switch G protein.
action: ACCEPT
reason: Direct in vitro nucleotide-exchange and activation assays establish RasC as
a functional Ras-family G protein.
supported_by:
- reference_id: PMID:17380187
supporting_text: RasGEFA catalysed the removal of GDP from RasC but not from other
Ras subfamily proteins, confirming that RasGEFA is specific for RasC
- term:
id: GO:0003925
label: G protein activity
evidence_type: IMP
original_reference_id: PMID:23132928
qualifier: enables
review:
summary: RasC functions as an activatable G protein upstream of the TORC2-PKB pathway
in chemotactic responses.
action: ACCEPT
reason: Consistent with the direct IDA evidence that RasC is a Ras-family G protein;
this genetic annotation supports the same molecular function.
supported_by:
- reference_id: PMID:23132928
supporting_text: Ras C activates the TORC2 complex, which in turn triggers PKBA and
a second PKB homolog, PKBR1
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:31263268
qualifier: enables
review:
summary: Activated RasC physically associates with the mTORC2 machinery and RacE within
a signaling supercomplex.
action: KEEP_AS_NON_CORE
reason: Bare "protein binding" is uninformative; the functional interaction (RasC-RacE-mTORC2
supercomplex, RasC-TOR binding) is better captured by the TORC2-binding and TORC2-activation
terms.
supported_by:
- reference_id: PMID:31263268
supporting_text: assembles the RacE-RasC-mTORC2 supercomplex that phosphorylates AKT
- term:
id: GO:0007265
label: Ras protein signal transduction
evidence_type: IMP
original_reference_id: PMID:15878331
qualifier: involved_in
review:
summary: RasC-mediated signal transduction affects motility, polarity, endocytosis,
and chemotactic responses in vegetative and developing cells.
action: ACCEPT
reason: Ras protein signal transduction is the core process RasC executes as a signaling
GTPase.
supported_by:
- reference_id: PMID:15878331
supporting_text: loss of signal transduction through the RasC protein was found to
- term:
id: GO:0007265
label: Ras protein signal transduction
evidence_type: IMP
original_reference_id: PMID:20660630
qualifier: involved_in
review:
summary: RasC signal transduction controls the TORC2-PKB pathway governing chemotaxis.
action: ACCEPT
reason: Directly supported - RasC is the upstream Ras controlling TORC2-PKB signaling
during chemotaxis.
supported_by:
- reference_id: PMID:20660630
supporting_text: RasC is required for TORC2-mediated activation of PKB
- term:
id: GO:0106070
label: regulation of adenylate cyclase-activating G protein-coupled receptor signaling
pathway
evidence_type: IMP
original_reference_id: PMID:11500376
qualifier: involved_in
review:
summary: RasC regulates cAMP-receptor-mediated activation of adenylyl cyclase; rasC-null
cells fail to produce cAMP in response to receptor stimulation.
action: ACCEPT
reason: Regulation of the adenylyl-cyclase-activating GPCR pathway is a core RasC function
underlying the cAMP relay during aggregation.
supported_by:
- reference_id: PMID:11500376
supporting_text: 'RasC appears to be a central regulatory molecule acting downstream
of serpentine receptor stimulation by cAMP that is required for two distinct effector
pathways: the activation of Akt/PKB through PI3K and the activation of adenylyl
cyclase.'
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:24986648
qualifier: enables
review:
summary: Activated RasC binds the LATS-family kinase NdrC via its Ras-binding domain
(lower affinity than RasG/RasB).
action: KEEP_AS_NON_CORE
reason: Documents a specific RasC-NdrC interaction, but as bare "protein binding" it
is uninformative; the cytokinesis phenotype is driven by RasG/RasB, not RasC.
supported_by:
- reference_id: PMID:24986648
supporting_text: NdrC was the only protein that bound RasC in the yeast two-hybrid
screen
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:26424797
qualifier: enables
review:
summary: The PP2A regulatory subunit B56 preferentially associates with the GDP-bound
form of RasC (and RasD), part of a phosphatase-mediated negative regulation of PKB.
action: KEEP_AS_NON_CORE
reason: A real interaction, but "protein binding" is uninformative; the functional
significance is regulatory (PP2A/B56 modulating Ras and PKB activity).
supported_by:
- reference_id: PMID:26424797
supporting_text: GDP forms of RasC and RasD, but not with RasG in vitro
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:27172998
qualifier: enables
review:
summary: Active RasC binds directly to the catalytic (FRB/kinase) domain of TOR, the
proposed mechanism by which RasC activates TORC2.
action: KEEP_AS_NON_CORE
reason: This specific RasC-TOR interaction is functionally important but is better represented
by TORC2-binding/activation terms than by generic "protein binding".
supported_by:
- reference_id: PMID:27172998
supporting_text: we found that TOR kinase itself specifically co-purifies with RasCGppNHp
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:29109256
qualifier: enables
review:
summary: The negative regulator C2GAP1 (a RasGAP) binds RasC in vitro, consistent with
its role in terminating Ras signaling for adaptation.
action: KEEP_AS_NON_CORE
reason: Documents a RasC-C2GAP1 interaction; bare "protein binding" is uninformative
relative to the GAP-mediated regulation it represents.
supported_by:
- reference_id: PMID:29109256
supporting_text: the in vitro binding assay indicates that C2GAP1 binds both GTP-
and GDP-bound Ras protein
- term:
id: GO:0005525
label: GTP binding
evidence_type: IDA
original_reference_id: PMID:15143344
qualifier: enables
review:
summary: RasC binds and is activated by GTP; an RBD-based assay directly detected GTP-loaded
(active) RasC upon cAMP stimulation.
action: ACCEPT
reason: Direct experimental demonstration of RasC nucleotide binding/activation supports
the GTP-binding molecular function.
supported_by:
- reference_id: PMID:15143344
supporting_text: it was shown that RasC was activated in aggregation-competent cells
in response to cAMP
- term:
id: GO:0005811
label: lipid droplet
evidence_type: HDA
original_reference_id: PMID:24036346
qualifier: part_of
review:
summary: RasC was recovered in a high-throughput lipid-droplet proteome, but its established
localization is the plasma membrane/leading edge; lipid-droplet association likely
reflects the shared lipid-anchor/membrane biochemistry rather than a functional role.
action: MARK_AS_OVER_ANNOTATED
reason: High-throughput organelle proteomes frequently capture membrane-anchored proteins
as background. There is no functional evidence for RasC acting at lipid droplets,
whose biology is unrelated to Ras chemotactic signaling.
supported_by:
- reference_id: PMID:24036346
supporting_text: Among the novel protein components are LdpA, a protein specific to
Dictyostelium
- term:
id: GO:0010856
label: adenylate cyclase activator activity
evidence_type: IGI
original_reference_id: PMID:18180289
qualifier: enables
review:
summary: RasC (with RasG) is required for cAMP-receptor-mediated activation of adenylyl
cyclase during aggregation, with RasC being the more important of the two for ACA
activation.
action: ACCEPT
reason: Activation of adenylyl cyclase is a core RasC function underlying the cAMP relay;
RasC/RasG are the presumptive GTPases required for cyclase activation.
supported_by:
- reference_id: PMID:18180289
supporting_text: proteins that are necessary for optimum cAMP signaling
- reference_id: PMID:17380187
supporting_text: RasG regulates chemotaxis and RasC is responsible for adenylyl cyclase
activation
- term:
id: GO:0030250
label: guanylate cyclase activator activity
evidence_type: IMP
original_reference_id: PMID:18180289
qualifier: enables
review:
summary: In vitro guanylyl cyclase activation is abolished in rasC-/rasG- cells, identifying
RasC/RasG as required for cyclase activation; however, RasG predominates for the cGMP
branch.
action: KEEP_AS_NON_CORE
reason: RasC contributes to guanylyl cyclase activation but this is largely a RasG-dominated
function and secondary to RasC's principal ACA/TORC2 roles.
supported_by:
- reference_id: PMID:18180289
supporting_text: guanylyl cyclase activation is also abolished in the
- term:
id: GO:0030250
label: guanylate cyclase activator activity
evidence_type: IGI
original_reference_id: PMID:18180289
qualifier: enables
review:
summary: Genetic-interaction evidence that RasC (with RasG) is required for guanylyl
cyclase activation; duplicate of the IMP annotation.
action: KEEP_AS_NON_CORE
reason: Same rationale as the paired IMP annotation - a redundant, RasG-dominated function.
supported_by:
- reference_id: PMID:18180289
supporting_text: guanylyl cyclase activation is also abolished in the
- term:
id: GO:0031252
label: cell leading edge
evidence_type: IC
original_reference_id: PMID:20493808
qualifier: is_active_in
review:
summary: Active RasC signaling (RasC-TORC2) is localized to the leading edge of chemotaxing
cells, where the Sca1/RasGEF complex promotes local RasC activation.
action: ACCEPT
reason: Leading-edge localization of active RasC signaling is a core spatial feature
underlying directed migration.
supported_by:
- reference_id: PMID:20493808
supporting_text: active Ras is enriched at the leading edge of chemotaxing cells
- term:
id: GO:0031982
label: vesicle
evidence_type: IDA
original_reference_id: PMID:19589376
qualifier: part_of
review:
summary: RasC was detected among proteins of secreted Dictyostelium nanovesicles (a
proteome dominated by actin and endosomal markers); this does not reflect a functional
vesicle role.
action: MARK_AS_OVER_ANNOTATED
reason: Recovery in a released-nanovesicle proteome is expected for a membrane-anchored
protein and does not indicate a dedicated vesicle function; RasC acts at the plasma
membrane/leading edge.
supported_by:
- reference_id: PMID:19589376
supporting_text: A proteomic analysis reveals a predominance of actin and actin-related
proteins.
- term:
id: GO:0051602
label: response to electrical stimulus
evidence_type: IMP
original_reference_id: PMID:26012633
qualifier: acts_upstream_of_or_within
review:
summary: rasC was identified among genes affecting electrotaxis in a large-scale screen;
the specific mechanistic role is not defined.
action: KEEP_AS_NON_CORE
reason: A screen-level hit indicating involvement in electrotaxis, but peripheral to
RasC's characterized core functions and without detailed mechanistic support in the
accessible text.
- term:
id: GO:1904841
label: TORC2 complex binding
evidence_type: IDA
original_reference_id: PMID:20660630
qualifier: enables
review:
summary: TORC2 binds specifically to the activated (GTP-bound) form of RasC, as shown
by co-immunoprecipitation with the TORC2 component Rip3.
action: ACCEPT
reason: Direct binding of activated RasC to TORC2 is a core molecular function central
to RasC-mediated PKB activation and chemotaxis.
supported_by:
- reference_id: PMID:20660630
supporting_text: This result shows that RasC and TORC2 interact in a regulated fashion
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:27009206
qualifier: enables
review:
summary: The RacE-binding, RhoGAP/RasGEF-domain protein GflB binds RasC (and RasG),
linking directional sensing to Ras/Rho activity at the leading edge.
action: KEEP_AS_NON_CORE
reason: A real RasC-GflB interaction, but bare "protein binding" is uninformative and
GflB's characterized activity is chiefly on RasG/Rac.
supported_by:
- reference_id: PMID:27009206
supporting_text: GflB also binds to Ras GTPases
- term:
id: GO:0110094
label: polyphosphate-mediated signaling
evidence_type: IMP
original_reference_id: PMID:28584190
qualifier: acts_upstream_of_or_within
review:
summary: RasC (with Akt/PKB) mediates extracellular-polyphosphate signaling that primes
cells for development and inhibits the proteasome.
action: KEEP_AS_NON_CORE
reason: RasC participates in polyphosphate signaling, but this is a specialized branch
secondary to its core aggregation and TORC2 roles.
supported_by:
- reference_id: PMID:28584190
supporting_text: mediated by Akt proteins and RasC in Dictyostelium
- term:
id: GO:0051897
label: positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal
transduction
evidence_type: IMP
original_reference_id: PMID:20660630
qualifier: acts_upstream_of_or_within
review:
summary: RasC positively regulates PKB activation, primarily through TORC2-mediated
phosphorylation of PKBR1/PKBA (largely PIP3-independent).
action: ACCEPT
reason: Positive regulation of PKB signaling is a core RasC output; RasC deletion reduces,
and activated RasC prolongs, PKB phosphorylation.
supported_by:
- reference_id: PMID:20660630
supporting_text: RasC is required for TORC2-mediated activation of PKB
- term:
id: GO:0061122
label: positive regulation of positive chemotaxis to cAMP
evidence_type: IMP
original_reference_id: PMID:20660630
qualifier: acts_upstream_of_or_within
review:
summary: Proper temporal control of RasC-TORC2-PKBR1 signaling is required for efficient
directed migration toward cAMP; dysregulated RasC impairs chemotaxis.
action: KEEP_AS_NON_CORE
reason: RasC contributes to cAMP chemotaxis via TORC2, but chemotactic gradient sensing
is dominated by RasG/PI3K; RasC's contribution here is modulatory.
supported_by:
- reference_id: PMID:20660630
supporting_text: RasC is required for TORC2-mediated activation of PKB
- term:
id: GO:1904515
label: positive regulation of TORC2 signaling
evidence_type: IMP
original_reference_id: PMID:20660630
qualifier: acts_upstream_of_or_within
review:
summary: RasC is required for and, when constitutively active, prolongs TORC2-mediated
PKB signaling.
action: ACCEPT
reason: Positive regulation of TORC2 is a core RasC function established by genetic and
in vitro reconstitution evidence.
supported_by:
- reference_id: PMID:20660630
supporting_text: RasC is required for TORC2-mediated activation of PKB
- term:
id: GO:0048870
label: cell motility
evidence_type: IMP
original_reference_id: PMID:15878331
qualifier: acts_upstream_of_or_within
review:
summary: Vegetative rasC-null cells show reduced random motility and are less polarized,
indicating a role for RasC in cell motility.
action: KEEP_AS_NON_CORE
reason: RasC affects motility, but the dominant motility/polarity regulator among the
Ras proteins is RasG; RasC's contribution is partial.
supported_by:
- reference_id: PMID:15878331
supporting_text: reduced random motility, were less polarized and had altered F-actin
- term:
id: GO:0019954
label: asexual reproduction
evidence_type: IGI
original_reference_id: PMID:18180289
qualifier: acts_upstream_of_or_within
review:
summary: RasC is required (with RasG) for aggregation, the developmental process that
leads to asexual sporulation.
action: KEEP_AS_NON_CORE
reason: The link to asexual reproduction is via RasC's role in aggregation/cAMP signaling
rather than a distinct reproductive function.
supported_by:
- reference_id: PMID:18180289
supporting_text: proteins that are necessary for optimum cAMP signaling
- term:
id: GO:0043326
label: chemotaxis to folate
evidence_type: IGI
original_reference_id: PMID:20833893
qualifier: acts_upstream_of_or_within
review:
summary: RasC can partially substitute for RasG in folate chemotaxis; rasC-/rasG- cells
are completely incapable of folate chemotaxis.
action: KEEP_AS_NON_CORE
reason: RasC contributes to folate chemotaxis but redundantly with (and secondarily
to) RasG.
supported_by:
- reference_id: PMID:20833893
supporting_text: to folate, RasC is capable of partially substituting for RasG
- term:
id: GO:0043327
label: chemotaxis to cAMP
evidence_type: IGI
original_reference_id: PMID:18180289
qualifier: acts_upstream_of_or_within
review:
summary: RasC (with RasG) is required for optimal cAMP signaling that underlies chemotaxis
during aggregation.
action: KEEP_AS_NON_CORE
reason: RasC contributes to cAMP chemotaxis but the chemotactic branch is predominantly
RasG-dependent; RasC's core role is ACA activation.
supported_by:
- reference_id: PMID:18180289
supporting_text: proteins that are necessary for optimum cAMP signaling
- term:
id: GO:0051897
label: positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal
transduction
evidence_type: IGI
original_reference_id: PMID:18180289
qualifier: acts_upstream_of_or_within
review:
summary: RasC (with RasG) acts upstream of PKB activation during cAMP signaling.
action: ACCEPT
reason: Positive regulation of PKB activation is a core RasC output during cAMP signaling,
consistent with the reduced PKB phosphorylation of rasC-null cells.
supported_by:
- reference_id: PMID:18180289
supporting_text: proteins that are necessary for optimum cAMP signaling
- term:
id: GO:0031152
label: aggregation involved in sorocarp development
evidence_type: IMP
original_reference_id: PMID:16885420
qualifier: acts_upstream_of_or_within
review:
summary: RasC is required for aggregation, controlling both cAMP relay (ACA activation)
and, partly, chemotaxis during early development.
action: ACCEPT
reason: Aggregation is a core developmental process requiring RasC; rasC-null cells
fail to aggregate.
supported_by:
- reference_id: PMID:16885420
supporting_text: the Ras protein RasC is involved in both processes
- term:
id: GO:0031152
label: aggregation involved in sorocarp development
evidence_type: IGI
original_reference_id: PMID:16885420
qualifier: acts_upstream_of_or_within
review:
summary: Genetic-interaction evidence (RasC vs RasG) confirming RasC's role in aggregation,
predominantly via ACA activation.
action: ACCEPT
reason: Duplicate line of evidence for RasC's core aggregation function.
supported_by:
- reference_id: PMID:16885420
supporting_text: signal transduction through RasC is more important in ACA activation
- term:
id: GO:0043327
label: chemotaxis to cAMP
evidence_type: IMP
original_reference_id: PMID:16885420
qualifier: acts_upstream_of_or_within
review:
summary: RasC contributes to cAMP chemotaxis, though signaling through RasG is more
important for chemotaxis while RasC is more important for the cAMP relay.
action: KEEP_AS_NON_CORE
reason: RasC's chemotactic contribution is secondary to RasG; its core role is ACA activation.
supported_by:
- reference_id: PMID:16885420
supporting_text: signal transduction through RasC is more important in ACA activation
- term:
id: GO:0051897
label: positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal
transduction
evidence_type: IMP
original_reference_id: PMID:16885420
qualifier: acts_upstream_of_or_within
review:
summary: RasC contributes to cAMP-stimulated PKB phosphorylation during aggregation.
action: ACCEPT
reason: Positive regulation of PKB is a core RasC output; this is consistent supporting
evidence from the isogenic RasC/RasG null comparison.
supported_by:
- reference_id: PMID:16885420
supporting_text: signal transduction through RasC is more important in ACA activation
- term:
id: GO:0051897
label: positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal
transduction
evidence_type: IGI
original_reference_id: PMID:16885420
qualifier: acts_upstream_of_or_within
review:
summary: Genetic-interaction evidence that RasC contributes to PKB activation during
aggregation.
action: ACCEPT
reason: Positive regulation of PKB is a core RasC output; consistent supporting evidence.
supported_by:
- reference_id: PMID:16885420
supporting_text: signal transduction through RasC is more important in ACA activation
- term:
id: GO:0051897
label: positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal
transduction
evidence_type: IMP
original_reference_id: PMID:11500376
qualifier: acts_upstream_of_or_within
review:
summary: cAMP-induced Akt/PKB phosphorylation through a PI3K-dependent pathway is dramatically
reduced in rasC-null cells.
action: ACCEPT
reason: RasC positively regulating PKB activation is a core function, directly demonstrated
by reduced Akt/PKB phosphorylation in rasC-null cells.
supported_by:
- reference_id: PMID:11500376
supporting_text: 'RasC appears to be a central regulatory molecule acting downstream
of serpentine receptor stimulation by cAMP that is required for two distinct effector
pathways: the activation of Akt/PKB through PI3K and the activation of adenylyl
cyclase.'
- term:
id: GO:0031152
label: aggregation involved in sorocarp development
evidence_type: IMP
original_reference_id: PMID:16023096
qualifier: acts_upstream_of_or_within
review:
summary: Disruption of rasC produces a strain that fails to aggregate, with defects
in both cAMP signal relay and chemotaxis.
action: ACCEPT
reason: Core developmental phenotype - RasC is required for aggregation.
supported_by:
- reference_id: PMID:16023096
supporting_text: fails to aggregate with defects in both cAMP
- term:
id: GO:0043327
label: chemotaxis to cAMP
evidence_type: IMP
original_reference_id: PMID:16023096
qualifier: acts_upstream_of_or_within
review:
summary: rasC-null cells are defective in cAMP chemotaxis (as part of the aggregation-negative
phenotype).
action: KEEP_AS_NON_CORE
reason: RasC contributes to cAMP chemotaxis but redundantly with/secondarily to RasG;
its core role is ACA activation.
supported_by:
- reference_id: PMID:16023096
supporting_text: fails to aggregate with defects in both cAMP
- term:
id: GO:0001558
label: regulation of cell growth
evidence_type: IMP
original_reference_id: PMID:15878331
qualifier: acts_upstream_of_or_within
review:
summary: rasC-null cells contain more protein and are larger than wild type, indicating
a role for RasC in regulating cell size/growth.
action: KEEP_AS_NON_CORE
reason: RasC influences vegetative cell size, but this is one of several secondary vegetative-cell
phenotypes rather than a core function.
supported_by:
- reference_id: PMID:15878331
supporting_text: Cells lacking RasC also contained more protein and were larger in
- term:
id: GO:0051491
label: positive regulation of filopodium assembly
evidence_type: IMP
original_reference_id: PMID:15878331
qualifier: acts_upstream_of_or_within
review:
summary: Loss of RasC alters F-actin distribution and cell polarity, consistent with
a role in actin-based protrusion regulation; the abstract does not specifically detail
filopodium assembly.
action: KEEP_AS_NON_CORE
reason: RasC affects the actin cytoskeleton and protrusions, but a specific filopodium-assembly
function is a minor aspect and only indirectly supported by the accessible abstract.
supported_by:
- reference_id: PMID:15878331
supporting_text: reduced random motility, were less polarized and had altered F-actin
- term:
id: GO:0007163
label: establishment or maintenance of cell polarity
evidence_type: IMP
original_reference_id: PMID:15878331
qualifier: acts_upstream_of_or_within
review:
summary: rasC-null cells are less polarized, indicating a role for RasC in cell polarity.
action: KEEP_AS_NON_CORE
reason: RasC contributes to polarity/actin organization but is not the dominant polarity
regulator among Dictyostelium Ras proteins.
supported_by:
- reference_id: PMID:15878331
supporting_text: reduced random motility, were less polarized and had altered F-actin
- term:
id: GO:0030036
label: actin cytoskeleton organization
evidence_type: IMP
original_reference_id: PMID:15878331
qualifier: acts_upstream_of_or_within
review:
summary: Loss of RasC alters F-actin distribution, linking RasC signaling to actin cytoskeleton
organization.
action: KEEP_AS_NON_CORE
reason: RasC influences the actin cytoskeleton (via TORC2-PKB and downstream effectors),
a secondary consequence of its signaling rather than a direct core function.
supported_by:
- reference_id: PMID:15878331
supporting_text: reduced random motility, were less polarized and had altered F-actin
- term:
id: GO:0043326
label: chemotaxis to folate
evidence_type: IMP
original_reference_id: PMID:15878331
qualifier: acts_upstream_of_or_within
review:
summary: rasC-null cells chemotax poorly to folate and show reduced folate-induced F-actin
and PKB responses.
action: KEEP_AS_NON_CORE
reason: RasC contributes to folate chemotaxis but redundantly with RasG; this is a vegetative-cell
role secondary to RasC's core aggregation/ACA function.
supported_by:
- reference_id: PMID:15878331
supporting_text: chemotaxed poorly to folate
- term:
id: GO:0120320
label: lateral pseudopodium retraction
evidence_type: IMP
original_reference_id: PMID:15878331
qualifier: acts_upstream_of_or_within
review:
summary: This specific term (lateral pseudopodium retraction) is not addressed in the
accessible (abstract-only) record for this reference, which reports reduced polarity
and altered F-actin but not pseudopod retraction dynamics per se.
action: UNDECIDED
reason: The cached publication is abstract-only and does not provide verifiable support
for a specific lateral-pseudopodium-retraction function; the curator likely relied
on full-text data not accessible here.
- term:
id: GO:0031152
label: aggregation involved in sorocarp development
evidence_type: IMP
original_reference_id: PMID:11500376
qualifier: acts_upstream_of_or_within
review:
summary: Disruption of rasC generates cells incapable of aggregation, a defect restricted
to the aggregation stage and rescuable by exogenous cAMP pulses.
action: ACCEPT
reason: RasC's requirement for aggregation is a core developmental function directly
demonstrated by the rasC-null phenotype.
supported_by:
- reference_id: PMID:11500376
supporting_text: generated cells incapable of aggregation
references:
- id: GO_REF:0000002
title: Gene Ontology annotation through association of InterPro records with GO terms
findings: []
- id: GO_REF:0000003
title: Gene Ontology annotation based on Enzyme Commission mapping
findings: []
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000044
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location
vocabulary mapping, accompanied by conservative changes to GO terms applied by
UniProt
findings: []
- id: PMID:11500376
title: RasC is required for optimal activation of adenylyl cyclase and Akt/PKB during
aggregation.
findings:
- statement: RasC is required for aggregation and acts downstream of the cAMP receptor
to activate both PI3K/Akt-PKB and adenylyl cyclase.
supporting_text: 'RasC appears to be a central regulatory molecule acting downstream
of serpentine receptor stimulation by cAMP that is required for two distinct effector
pathways: the activation of Akt/PKB through PI3K and the activation of adenylyl
cyclase.'
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Foundational rasC-null study establishing RasC's role in cAMP relay
(ACA activation) and PKB activation during aggregation; PMID/title verified against
the cached full text.
- id: PMID:15143344
title: Chemoattractant-induced Ras activation during Dictyostelium aggregation.
findings:
- statement: RasC is rapidly and transiently activated (GTP-loaded) in aggregation-competent
cells upon cAMP stimulation.
supporting_text: it was shown that RasC was activated in aggregation-competent cells
in response to cAMP
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Directly demonstrates cAMP-induced RasC activation via an RBD-binding
assay; supports GTP-binding and G-protein activity.
- id: PMID:15878331
title: Loss of the Dictyostelium RasC protein alters vegetative cell size, motility
and endocytosis.
findings:
- statement: rasC-null vegetative cells have reduced random motility, reduced polarity,
altered F-actin, larger size, and normal cytokinesis.
supporting_text: reduced random motility, were less polarized and had altered F-actin
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Abstract-only in cache; documents vegetative-cell phenotypes and shows
cytokinesis/division rate are unaffected in rasC-null cells.
- id: PMID:16023096
title: The effect of the disruption of a gene encoding a PI4 kinase on the developmental
defect exhibited by Dictyostelium rasC(-) cells.
findings:
- statement: rasC disruption produces a strain that fails to aggregate with defects
in both cAMP signal relay and chemotaxis.
supporting_text: fails to aggregate with defects in both cAMP
- id: PMID:16885420
title: Delineation of the roles played by RasG and RasC in cAMP-dependent signal
transduction during the early development of Dictyostelium discoideum.
findings:
- statement: RasG is more important for chemotaxis while RasC is more important for
adenylyl cyclase (cAMP relay) activation, with partial functional overlap.
supporting_text: signal transduction through RasC is more important in ACA activation
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Defines the division of labor between RasC (ACA/relay) and RasG (chemotaxis)
using isogenic single and double null strains.
- id: PMID:17380187
title: 'Cyclic AMP signalling in Dictyostelium: G-proteins activate separate Ras
pathways using specific RasGEFs.'
findings:
- statement: RasGEFA (Aimless) specifically activates RasC, and RasC is responsible
for adenylyl cyclase activation whereas RasG regulates chemotaxis.
supporting_text: RasGEFA catalysed the removal of GDP from RasC but not from other
Ras subfamily proteins, confirming that RasGEFA is specific for RasC
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Establishes RasGEFA-RasC specificity in vitro and in vivo and the
RasC-to-ACA / RasG-to-chemotaxis division.
- id: PMID:18180289
title: Rap1 activation in response to cAMP occurs downstream of ras activation during
Dictyostelium aggregation.
findings:
- statement: RasC/RasG are the presumptive GTPases required for cAMP-induced guanylyl
cyclase activation, and Rap1 acts downstream of the Ras proteins.
supporting_text: guanylyl cyclase activation is also abolished in the
- id: PMID:19589376
title: 'Nanovesicles released by Dictyostelium cells: a potential carrier for drug
delivery.'
findings:
- statement: Secreted Dictyostelium nanovesicle proteome is dominated by actin and
actin-related/endosomal proteins.
supporting_text: A proteomic analysis reveals a predominance of actin and actin-related
proteins.
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: High-throughput vesicle proteome; RasC recovery here does not indicate
a functional vesicle role.
- id: PMID:20493808
title: A Ras signaling complex controls the RasC-TORC2 pathway and directed cell
migration.
findings:
- statement: A Sca1/RasGEF/PP2A complex is enriched at the leading edge and controls
RasC activation and the downstream TORC2-PKB pathway; active Ras is enriched at
the leading edge.
supporting_text: active Ras is enriched at the leading edge of chemotaxing cells
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Establishes leading-edge, spatiotemporally controlled RasC-TORC2 signaling
via the Sca1 scaffold complex.
- id: PMID:20660630
title: Ras-mediated activation of the TORC2-PKB pathway is critical for chemotaxis.
findings:
- statement: RasC is required for and directly binds/activates TORC2, setting the temporal
dynamics of PKBR1/PKBA phosphorylation independently of PIP3.
supporting_text: RasC is required for TORC2-mediated activation of PKB
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Genetic plus in vitro reconstitution evidence that activated RasC is
an upstream regulator of TORC2; TORC2 binds the activated form of RasC.
- id: PMID:20833893
title: Ras proteins have multiple functions in vegetative cells of Dictyostelium.
findings:
- statement: RasC can partially substitute for RasG in folate chemotaxis, but not for
RasG's growth/cytokinesis or random-motility functions.
supporting_text: to folate, RasC is capable of partially substituting for RasG
- id: PMID:23132928
title: Delineating the core regulatory elements crucial for directed cell migration
by examining folic-acid-mediated responses.
findings:
- statement: RasC activates the TORC2 complex, which triggers PKBA and PKBR1, in a
pathway parallel to RasG/PI3K during folate and cAMP responses.
supporting_text: Ras C activates the TORC2 complex, which in turn triggers PKBA and
a second PKB homolog, PKBR1
- id: PMID:24036346
title: Dictyostelium lipid droplets host novel proteins.
findings:
- statement: High-throughput identification of the Dictyostelium lipid-droplet proteome.
supporting_text: Among the novel protein components are LdpA, a protein specific
to Dictyostelium
reference_review:
relevance: LOW
correctness: VERIFIED
review_notes: HDA lipid-droplet proteome; RasC recovery likely reflects membrane/lipid-anchor
background rather than a functional lipid-droplet role.
- id: PMID:24986648
title: Regulation of a LATS-homolog by Ras GTPases is important for the control of
cell division.
findings:
- statement: NdrC (LATS2 homolog) binds RasG/RasB (and less strongly RasC/Rap1); cell
division is controlled by RasG/RasB, not by RasC.
supporting_text: NdrC was the only protein that bound RasC in the yeast two-hybrid
screen
- id: PMID:26012633
title: A large-scale screen reveals genes that mediate electrotaxis in Dictyostelium
discoideum.
findings: []
- id: PMID:26424797
title: PP2A/B56 and GSK3/Ras suppress PKB activity during Dictyostelium chemotaxis.
findings:
- statement: The PP2A regulatory subunit B56 preferentially binds GDP-bound RasC and
RasD (not RasG) and contributes to suppression of PKB activity.
supporting_text: GDP forms of RasC and RasD, but not with RasG in vitro
- id: PMID:27009206
title: The novel RacE-binding protein GflB sharpens Ras activity at the leading edge
of migrating cells.
findings:
- statement: GflB (a RhoGAP/RasGEF-domain protein) binds RasC and RasG and balances
Ras/Rho activation to orient signaling toward higher chemoattractant concentrations.
supporting_text: GflB also binds to Ras GTPases
- id: PMID:27172998
title: The small GTPases Ras and Rap1 bind to and control TORC2 activity.
findings:
- statement: Active RasC binds the catalytic domain of TOR, while Rap1 binds RIP3/SIN1;
both control TORC2 activity, with RasC playing the major role.
supporting_text: we found that TOR kinase itself specifically co-purifies with RasCGppNHp
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Shows RasC binds TOR directly, providing a mechanism for RasC-mediated
TORC2 activation.
- id: PMID:28584190
title: Extracellular polyphosphate signals through Ras and Akt to prime Dictyostelium
discoideum cells for development.
findings:
- statement: Polyphosphate signals through RasC and Akt to inhibit the proteasome and
induce CsA expression, priming cells for development.
supporting_text: mediated by Akt proteins and RasC in Dictyostelium
- id: PMID:29109256
title: GPCR-controlled membrane recruitment of negative regulator C2GAP1 locally
inhibits Ras signaling for adaptation and long-range chemotaxis.
findings:
- statement: C2GAP1 is a RasGAP that binds Ras and locally inhibits Ras signaling for
adaptation during chemotaxis.
supporting_text: the in vitro binding assay indicates that C2GAP1 binds both GTP-
and GDP-bound Ras protein
- id: PMID:30462573
title: An endogenous chemorepellent directs cell movement by inhibiting pseudopods
at one side of cells.
findings:
- statement: AprA chemorepulsion uses a subset of chemoattraction pathway components
including Ras (RasC/RasG redundantly).
supporting_text: signal transduction pathways including Ras
- id: PMID:31263268
title: Phosphorylated Rho-GDP directly activates mTORC2 kinase towards AKT through
dimerization with Ras-GTP to regulate cell migration.
findings:
- statement: Chemoattractant-induced phosphorylation of GDP-RacE assembles a RacE-RasC-mTORC2
supercomplex that phosphorylates AKT.
supporting_text: assembles the RacE-RasC-mTORC2 supercomplex that phosphorylates
AKT
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Defines the GTP-RasC / phospho-GDP-RacE / mTORC2 mechanism of AKT activation.
- id: PMID:33238110
title: Hetero-oligomerization of Rho and Ras GTPases Connects GPCR Activation to mTORC2-AKT
Signaling.
findings:
- statement: GTP-RasC and phosphorylated GDP-RacE directly interact and hetero-oligomerize
to activate mTORC2 toward AKT (but not ERK).
supporting_text: these two GTPases directly interact in cells
reference_review:
relevance: HIGH
correctness: VERIFIED
review_notes: Establishes the RasC-RacE hetero-oligomer as the activating input to
mTORC2-AKT signaling.
- id: PMID:34154396
title: An Autocrine Negative Feedback Loop Inhibits Dictyostelium discoideum Proliferation
through Pathways Including IP3/Ca(2).
findings:
- statement: Under low-nutrient conditions, loss of RasC blocks polyphosphate-induced
proliferation inhibition.
supporting_text: the loss of GrlD or RasC blocked the sensitivity of cells to polyphosphate
core_functions:
- description: RasC is a plasma-membrane-anchored Ras-family small GTPase that acts
as a nucleotide-dependent molecular switch, cycling between an inactive GDP-bound
and an active GTP-bound state (with intrinsic GTPase activity), to transduce cAMP-receptor
(GPCR) signals during Dictyostelium chemotaxis and development.
molecular_function:
id: GO:0003925
label: G protein activity
locations:
- id: GO:0005886
label: plasma membrane
- id: GO:0031252
label: cell leading edge
directly_involved_in:
- id: GO:0007264
label: small GTPase-mediated signal transduction
supported_by:
- reference_id: PMID:17380187
supporting_text: Ras proteins are small, monomeric GTPases that act as crucial regulators
of a number of cellular signalling pathways
- reference_id: PMID:15143344
supporting_text: it was shown that RasC was activated in aggregation-competent cells
in response to cAMP
- description: Activated RasC drives the chemoattractant-induced activation of adenylyl
cyclase (ACA) and the cAMP relay during aggregation, functioning as the principal
Ras protein for the cAMP signal-relay branch downstream of the cAMP GPCR and RasGEFA
(Aimless).
molecular_function:
id: GO:0010856
label: adenylate cyclase activator activity
directly_involved_in:
- id: GO:0007188
label: adenylate cyclase-modulating G protein-coupled receptor signaling pathway
supported_by:
- reference_id: PMID:17380187
supporting_text: RasG regulates chemotaxis and RasC is responsible for adenylyl cyclase
activation
- reference_id: PMID:11500376
supporting_text: 'RasC appears to be a central regulatory molecule acting downstream
of serpentine receptor stimulation by cAMP that is required for two distinct effector
pathways: the activation of Akt/PKB through PI3K and the activation of adenylyl
cyclase.'
- description: GTP-bound RasC binds the TOR catalytic domain and, together with phosphorylated
GDP-bound RacE, directly activates TORC2, setting the temporal and spatial dynamics
of PKBR1/PKBA (Akt) phosphorylation that control the actin cytoskeleton and directed
cell migration.
molecular_function:
id: GO:1904841
label: TORC2 complex binding
locations:
- id: GO:0031252
label: cell leading edge
directly_involved_in:
- id: GO:1904515
label: positive regulation of TORC2 signaling
supported_by:
- reference_id: PMID:20660630
supporting_text: RasC is required for TORC2-mediated activation of PKB
- reference_id: PMID:27172998
supporting_text: we found that TOR kinase itself specifically co-purifies with RasCGppNHp