CG18507 encodes the Drosophila member of the TMEM268 family (PANTHER PTHR31193, subfamily SF1; Pfam DUF4481), a predicted multi-pass membrane protein. The fly protein has a long, largely disordered and low-complexity N-terminal extension (about residues 1-226) that has no counterpart in vertebrate TMEM268, followed by a conserved core that aligns to human TMEM268 and contains two predicted transmembrane helices (residues 292-310 and 316-339). The gene produces several alternative products that differ only at their C-termini. In the embryo, CG18507 mRNA is expressed in the developing tracheal system, where its expression depends on the bHLH-PAS transcription factor Trachealess. In mammals, TMEM268 localizes to the endoplasmic reticulum and plasma membrane and stabilizes integrin subunits (beta4 integrin in gastric cancer cells, CD11b in phagocytes) by limiting their degradation; flies lack orthologs of those integrin partners, and no molecular activity, partner, membrane compartment or loss-of-function phenotype has been established for CG18507 itself.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
| GO:0016020 membrane | ISS | NEW | Summary: Proposed cellular-component annotation from sequence architecture; CG18507 has no GO annotation in GOA. Reason: The protein has two Phobius-predicted transmembrane helices within the core that is conserved with vertebrate TMEM268 (same PANTHER subfamily PTHR31193:SF1), and the human ortholog is an experimentally observed membrane protein (ER and plasma membrane). The generic term is used because no compartment has been tested for the fly protein, and the human result names two different membranes. A more specific location should wait for direct localization data. Supporting Evidence: file:DROME/CG18507/CG18507-uniprot.txt FT TRANSMEM 292..310 FT /note="Helical" FT /evidence="ECO:0000256|SAM:Phobius" file:DROME/CG18507/CG18507-uniprot.txt DR PANTHER; PTHR31193:SF1; TRANSMEMBRANE PROTEIN 268; 1. PMID:30361615 Immunofluorescence assay demonstrated that the TMEM268 protein was mainly present in the endoplasmic reticulum and plasma membrane |
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Download this section (compressed HTML)Q: Does CG18507 bind and stabilize any Drosophila integrin or other membrane protein, as TMEM268 does for ITGB4 and CD11b in mammals, or is the integrin-stabilizing role a vertebrate innovation?
Q: Is CG18507 required in the embryonic tracheal epithelium, where its mRNA is expressed under Trachealess control, or is that expression without a functional requirement?
Experiment: Tag endogenous CG18507 (for example with a tag in a region shared by all isoforms) and determine its subcellular localization in embryonic trachea and cultured cells by co-staining with ER and plasma-membrane markers.
Type: localization
Experiment: Make a CG18507 null allele and score tracheal tube morphology, lumen maturation and viability, then test whether PS integrin surface levels change in mutant tissue.
Type: genetic loss-of-function
Experiment: Affinity-purify tagged CG18507 from fly tissue and identify co-purifying membrane proteins by mass spectrometry.
Type: interaction proteomics
What is not known β curated, literature-grounded statements of the open unknowns (the inverse of core functions).
Gap: The molecular activity of CG18507 is undetermined. Vertebrate TMEM268 stabilizes specific integrin subunits (ITGB4, CD11b) that have no fly ortholog, so whether the fly protein stabilizes any membrane protein, and which, is untested.
BIOLOGY MF_DARK
What is known: CG18507 is a predicted two-helix membrane protein in the TMEM268 subfamily, and its mRNA is expressed in embryonic trachea under Trachealess control.
Gap: The membrane compartment and topology of CG18507, and the role of its fly-specific disordered N-terminal extension, are undetermined.
BIOLOGY CC_DARK
What is known: Two transmembrane helices are predicted; human TMEM268 is seen in ER and plasma membrane.
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