CG8353

UniProt ID: Q9VLR2
Organism: Drosophila melanogaster
Review Status: IN PROGRESS
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Gene Description

CG8353 is a compact CDA-like zinc-dependent deaminase associated with pyrimidine nucleoside salvage. Its cytidine-deaminase family signature supports hydrolytic conversion of cytidine and deoxycytidine to the corresponding uridine nucleosides. Cytosolic localization and the reaction assignment are evolutionary inferences; direct fly substrate kinetics and oligomerization measurements are not established.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0004126 cytidine deaminase activity
IBA
GO_REF:0000033
ACCEPT
Summary: Cytidine deamination is supported by the CDA-like branch and compact enzyme architecture.
Reason: The 170-residue target has a complete cytidine-deaminase-like zinc-binding domain and the tetrameric cytidine-deaminase family signature. These agree with the curated PAINT inference of free-nucleoside deamination; the broad CMP/dCMP-type domain label alone would not resolve substrate specificity.
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR006262; Cyt_deam_tetra.
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR016192; APOBEC/CMP_deaminase_Zn-bd.
GO:0004126 cytidine deaminase activity
IEA
GO_REF:0000120
ACCEPT
Summary: Cytidine deamination is supported by the CDA-like branch and compact enzyme architecture.
Reason: The 170-residue target has a complete cytidine-deaminase-like zinc-binding domain and the tetrameric cytidine-deaminase family signature. These agree with the curated PAINT inference of free-nucleoside deamination; the broad CMP/dCMP-type domain label alone would not resolve substrate specificity.
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR006262; Cyt_deam_tetra.
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR016192; APOBEC/CMP_deaminase_Zn-bd.
GO:0005737 cytoplasm
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: Cytoplasm is compatible with the more specific cytosolic inference.
Reason: The compact soluble CDA-like architecture lacks a membrane topology, and the PAINT location is cytosol. This broad compartment does not add evidence of a particular cellular microdomain.
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR006262; Cyt_deam_tetra.
GO:0005829 cytosol
IBA
GO_REF:0000033
ACCEPT
Summary: Cytosolic pyrimidine salvage is a reasonable inherited location.
Reason: The target is a compact soluble CDA-like enzyme with the conserved cytidine-deaminase classification. The phylogenetic cytosolic placement is retained; direct fly localization is not available.
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR006262; Cyt_deam_tetra.
GO:0006217 deoxycytidine catabolic process
IBA
GO_REF:0000033
ACCEPT
Summary: Deoxycytidine catabolism fits the cytidine-deaminase branch.
Reason: CDA-type nucleoside deaminases act on cytidine and deoxycytidine. The PAINT reaction-level process is compatible with the specific tetrameric CDA signature and does not rely on the ARBA functional sentence.
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR006262; Cyt_deam_tetra.
GO:0008270 zinc ion binding
IEA
GO_REF:0000120
KEEP AS NON CORE
Summary: Zinc is a catalytic cofactor of the deaminase fold.
Reason: The target contains the conserved zinc-binding deaminase domain. Metal binding is ancillary to hydrolytic deamination, not a separate zinc-homeostasis activity.
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR016192; APOBEC/CMP_deaminase_Zn-bd.
GO:0016787 hydrolase activity
IEA
GO_REF:0000002
MODIFY
Summary: Cytidine deaminase specifies the generic hydrolase class.
Reason: The CDA-like branch supports hydrolytic removal of the cytidine amino group, so the substrate-defined enzyme term carries the useful function.
Proposed replacements: cytidine deaminase activity
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR006262; Cyt_deam_tetra.
GO:0042802 identical protein binding
IEA
GO_REF:0000117
UNDECIDED
Summary: The target oligomeric interaction is not directly established.
Reason: The tetrameric CDA family signature suggests self-association, but sequence classification does not measure oligomerization of CG8353. The broad identical-protein-binding term adds little mechanistic specificity without assembly data.
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR006262; Cyt_deam_tetra.
GO:0046109 uridine biosynthetic process
IBA
GO_REF:0000033
ACCEPT
Summary: Uridine production follows cytidine deamination.
Reason: The inherited uridine-biosynthesis annotation expresses the direct product of the cytidine-deaminase reaction. This does not imply that the enzyme supplies all steps of de-novo pyrimidine synthesis.
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR006262; Cyt_deam_tetra.
GO:0055086 nucleobase-containing small molecule metabolic process
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: Nucleobase-containing small molecule metabolic process is a broad parent of nucleoside salvage.
Reason: The supported CDA-like reaction acts on pyrimidine nucleosides. This parent process is biologically compatible but less informative than the direct cytidine/deoxycytidine deamination processes.
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR006262; Cyt_deam_tetra.
GO:0072527 pyrimidine-containing compound metabolic process
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: Pyrimidine-containing compound metabolic process is a broad parent of nucleoside salvage.
Reason: The supported CDA-like reaction acts on pyrimidine nucleosides. This parent process is biologically compatible but less informative than the direct cytidine/deoxycytidine deamination processes.
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR006262; Cyt_deam_tetra.
GO:1901135 carbohydrate derivative metabolic process
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: Carbohydrate derivative metabolic process is a broad parent of nucleoside salvage.
Reason: The supported CDA-like reaction acts on pyrimidine nucleosides. This parent process is biologically compatible but less informative than the direct cytidine/deoxycytidine deamination processes.
Supporting Evidence:
file:DROME/CG8353/CG8353-uniprot.txt
DR InterPro; IPR006262; Cyt_deam_tetra.

Core Functions

Deaminates pyrimidine nucleosides in a conserved CDA-like salvage pathway.

Supporting Evidence:
  • file:DROME/CG8353/CG8353-uniprot.txt
    DR InterPro; IPR006262; Cyt_deam_tetra.
  • file:DROME/CG8353/CG8353-uniprot.txt
    DR InterPro; IPR016192; APOBEC/CMP_deaminase_Zn-bd.

References

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Deep Research

Falcon

(CG8353-deep-research-falcon.md)

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