CG8915

UniProt ID: Q9VX63
Organism: Drosophila melanogaster
Review Status: DRAFT
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Gene Description

CG8915 is an R3H-containing DEAH-family RNA helicase with conserved ATP-binding and catalytic motifs. It is inferred to couple ATP hydrolysis to RNA remodeling with 3'-to-5' polarity, based on its relationship to characterized YTHDC2-family enzymes. Its physiological RNA targets and cellular compartment remain unresolved. The protein is distinct from the divergent helicase-like Bgcn protein and lacks an annotated YTH methyladenosine-reader domain.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0000166 nucleotide binding
IEA
GO_REF:0000104
MODIFY
Summary: The conserved P-loop supports ATP binding as the specific nucleotide interaction.
Reason: The conserved P-loop supports ATP binding as the specific nucleotide interaction. Both sequence alignments preserve the diagnostic ATP-binding region, unlike the divergent Bgcn control.
Proposed replacements: ATP binding
Supporting Evidence:
file:DROME/CG8915/CG8915-bioinformatics/RESULTS.md
CG8915/Q9VX63 retains a canonical ATP-binding P-loop and DEAH catalytic motif. It differs from the inactive helicase-like protein Bgcn/Q9W1I2 at both diagnostic regions.
GO:0003676 nucleic acid binding
IEA
GO_REF:0000120
MODIFY
Summary: Nucleic acid binding is supported but less informative than RNA binding for this R3H-containing RNA helicase.
Reason: Nucleic acid binding is supported but less informative than RNA binding for this R3H-containing RNA helicase. The conserved domain architecture supports RNA as the relevant nucleic acid; no DNA-specific function is established.
Proposed replacements: RNA binding
Supporting Evidence:
file:DROME/CG8915/CG8915-uniprot.txt
DR InterPro; IPR001374; R3H_dom.
PMID:29033321
Our biochemical studies indicate that YTHDC2 is an RNA-induced ATPase with a 3'β†’5' RNA helicase activity.
GO:0003723 RNA binding
IBA
GO_REF:0000033
ACCEPT
Summary: CG8915 contains the RNA-helicase core and an R3H RNA-binding domain.
Reason: CG8915 contains the RNA-helicase core and an R3H RNA-binding domain. These features support the PAINT RNA-binding inference, independently of precise transcript specificity or of whether every mechanistic feature of mammalian YTHDC2 is retained.
Supporting Evidence:
file:DROME/CG8915/CG8915-bioinformatics/RESULTS.md
CG8915/Q9VX63 retains a canonical ATP-binding P-loop and DEAH catalytic motif. It differs from the inactive helicase-like protein Bgcn/Q9W1I2 at both diagnostic regions.
file:DROME/CG8915/CG8915-uniprot.txt
DR InterPro; IPR001374; R3H_dom.
PMID:29033321
Our biochemical studies indicate that YTHDC2 is an RNA-induced ATPase with a 3'β†’5' RNA helicase activity.
GO:0004386 helicase activity
IBA
GO_REF:0000033
MODIFY
Summary: The broad activity is consistent with a conserved ATP-dependent RNA helicase.
Reason: The broad activity is consistent with a conserved ATP-dependent RNA helicase. The manually curated transfer from human YTHDC2 supplies the more informative 3'-5' RNA helicase activity, supported by target motif conservation and primary ortholog enzymology.
Proposed replacements: 3'-5' RNA helicase activity
Supporting Evidence:
file:DROME/CG8915/CG8915-bioinformatics/RESULTS.md
CG8915/Q9VX63 retains a canonical ATP-binding P-loop and DEAH catalytic motif. It differs from the inactive helicase-like protein Bgcn/Q9W1I2 at both diagnostic regions.
PMID:29033321
Our biochemical studies indicate that YTHDC2 is an RNA-induced ATPase with a 3'β†’5' RNA helicase activity.
GO:0005524 ATP binding
IEA
GO_REF:0000120
ACCEPT
Summary: CG8915 retains the diagnostic ATP-binding P-loop and catalytic DEAH motif.
Reason: CG8915 retains the diagnostic ATP-binding P-loop and catalytic DEAH motif. Comparative alignment to experimentally characterized YTHDC2 supports ATP utilization; the altered motifs of the separate Bgcn protein are not present in this target.
Supporting Evidence:
file:DROME/CG8915/CG8915-bioinformatics/RESULTS.md
CG8915/Q9VX63 retains a canonical ATP-binding P-loop and DEAH catalytic motif. It differs from the inactive helicase-like protein Bgcn/Q9W1I2 at both diagnostic regions.
PMID:29033321
Our biochemical studies indicate that YTHDC2 is an RNA-induced ATPase with a 3'β†’5' RNA helicase activity.
GO:0016787 hydrolase activity
IEA
GO_REF:0000104
MODIFY
Summary: The broad activity is consistent with a conserved ATP-dependent RNA helicase.
Reason: The broad activity is consistent with a conserved ATP-dependent RNA helicase. The manually curated transfer from human YTHDC2 supplies the more informative 3'-5' RNA helicase activity, supported by target motif conservation and primary ortholog enzymology.
Proposed replacements: 3'-5' RNA helicase activity
Supporting Evidence:
file:DROME/CG8915/CG8915-bioinformatics/RESULTS.md
CG8915/Q9VX63 retains a canonical ATP-binding P-loop and DEAH catalytic motif. It differs from the inactive helicase-like protein Bgcn/Q9W1I2 at both diagnostic regions.
PMID:29033321
Our biochemical studies indicate that YTHDC2 is an RNA-induced ATPase with a 3'β†’5' RNA helicase activity.
GO:0034458 3'-5' RNA helicase activity
ISS
GO_REF:0000024
ACCEPT
Summary: The manually curated ISS transfer from human YTHDC2 is biologically reasonable for this DEAH/R3H helicase with conserved ATP-binding and catalytic motifs.
Reason: The manually curated ISS transfer from human YTHDC2 is biologically reasonable for this DEAH/R3H helicase with conserved ATP-binding and catalytic motifs. Current FlyBase orthology also favors YTHDC2. This is conserved-function inference, not a fly biochemical assay; detailed RNA substrates, YTH-domain methyladenosine recognition and meiotic phenotypes are not implied.
Supporting Evidence:
file:DROME/CG8915/CG8915-bioinformatics/RESULTS.md
CG8915/Q9VX63 retains a canonical ATP-binding P-loop and DEAH catalytic motif. It differs from the inactive helicase-like protein Bgcn/Q9W1I2 at both diagnostic regions.
PMID:29033321
Our biochemical studies indicate that YTHDC2 is an RNA-induced ATPase with a 3'β†’5' RNA helicase activity.

Core Functions

Binds and remodels RNA through a conserved ATP-dependent DEAH helicase mechanism; precise substrates remain unresolved.

Molecular Function:
3'-5' RNA helicase activity
Supporting Evidence:
  • file:DROME/CG8915/CG8915-bioinformatics/RESULTS.md
    CG8915/Q9VX63 retains a canonical ATP-binding P-loop and DEAH catalytic motif. It differs from the inactive helicase-like protein Bgcn/Q9W1I2 at both diagnostic regions.
  • PMID:29033321
    Our biochemical studies indicate that YTHDC2 is an RNA-induced ATPase with a 3'β†’5' RNA helicase activity.

References

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External Prediction Reviews

These computational predictions are reviewed separately from the GOA annotation set used for this review. The assessments below are from this project and do not constitute official GO annotations or endorsement by GO/UniProt. They are not included in the existing annotation review above.

ProtNLM2 External predictions

View prediction review YAML Β· CG8915-protnlm-predictions-review.yaml Β· Review status: COMPLETE

The broad nucleic-acid-binding prediction is supported and less precise than RNA binding.

Source documents: projects/PROTNLM_EVALUATION/fly-benchmark/predictions.jsonl.gz Β· genes/DROME/CG8915/CG8915-predictions-source.json

Review score: 2 = concordant with evidence; 1 = uncertain; 0 = discordant with evidence. This is an assessment score, not a model probability.

GO:0003676 nucleic acid binding GO_MF
LSP β€” Less precise than existing annotation Review score: 2/2
Prediction method: ProtNLM2 Β· Version: UniProt API snapshot 2026-09-08
Review rationale: Nucleic acid binding is supported by the R3H domain and conserved RNA-helicase architecture. RNA binding is the existing, more specific assignment. Target sequence analysis retains the ATP-binding and DEAH motifs, although the broad RNA-binding conclusion does not depend on resolving every aspect of catalysis or YTHDC2-family phylogeny.
Supporting Evidence:

Deep Research

Falcon

(CG8915-deep-research-falcon.md)

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πŸ“š Additional Documentation

Notes

(CG8915-notes.md)

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Bioinformatics Results

(RESULTS.md)

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πŸ“„ View Raw YAML

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