fadA

UniProt ID: Q00743
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Review Status: DRAFT
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Gene Description

fadA encodes the alpha subunit of the principal heterotrimeric G protein of Aspergillus nidulans. GTP-bound (active) FadA promotes vegetative (hyphal) proliferation and represses asexual sporulation and secondary metabolism; its signaling is attenuated by the RGS protein FlbA, which licenses conidiation. FadA (with the Gbeta SfaD and Ggamma GpgA) thus sits at the growth/development decision point, and also modulates sterigmatocystin and penicillin production and sexual development.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0003925 G protein activity
IBA
GO_REF:0000033
ACCEPT
Summary: Accept: G protein activity.
Reason: The IBA call places FadA in the G-alpha clade, and GO:0003925 covers exactly the GTP-binding/hydrolysing signal-transducer role of a G-alpha subunit. This is FadA's core molecular function.
GO:0005737 cytoplasm
IBA
GO_REF:0000033
ACCEPT
Summary: Accept: cytoplasm.
Reason: G-alpha subunits act on the cytoplasmic face of the plasma membrane, so an is_active_in cytoplasm call is compatible; the term is unspecific, and the informative location for FadA is the heterotrimer (GO:0005834).
GO:0005834 heterotrimeric G-protein complex
IBA
GO_REF:0000033
ACCEPT
Summary: Accept: heterotrimeric G-protein complex.
Reason: Complex membership is the primary structural statement for a G-alpha subunit: FadA partners the G-beta SfaD and the G-gamma GpgA, both of which are independently annotated to this complex.
GO:0001664 G protein-coupled receptor binding
IEA
GO_REF:0000002
ACCEPT
Summary: Accept: G protein-coupled receptor binding.
Reason: Receptor coupling is the defining interaction of a G-alpha subunit. The call is a family-level electronic inference and no A. nidulans receptor-binding assay is cited in this review, but it is a sound default for the subunit that receives GPCR input.
GO:0003924 GTPase activity
IEA
GO_REF:0000120
ACCEPT
Summary: Accept: GTPase activity.
Reason: Assigned from the conserved G-domain signature. The fadA alleles characterised in this review are nucleotide-cycle mutants (a constitutively signalling allele and a dominant-interfering allele), which is what an intrinsically hydrolysing GTPase predicts.
GO:0005525 GTP binding
IEA
GO_REF:0000002
ACCEPT
Summary: Accept: GTP binding.
Reason: The P-loop and G-box motifs of the G-alpha nucleotide-binding domain support guanine-nucleotide binding; this is the ligand-binding facet of the same activity captured by GO:0003925.
GO:0005834 heterotrimeric G-protein complex
IEA
GO_REF:0000002
ACCEPT
Summary: Accept: heterotrimeric G-protein complex.
Reason: Reaches the same complex assignment as the IBA row by sequence similarity. Retained because the heterotrimer, not the free subunit, is the assembly in which FadA acts.
GO:0007165 signal transduction
IEA
GO_REF:0000002
ACCEPT
Summary: Accept: signal transduction.
Reason: Correct but very general. Kept as the parent of the informative GPCR-pathway term rather than as an independent statement of what FadA does.
GO:0007186 G protein-coupled receptor signaling pathway
IEA
GO_REF:0000002
ACCEPT
Summary: Accept: G protein-coupled receptor signaling pathway.
Reason: The pathway term that matches FadA's role: it transduces receptor input into the proliferation-versus-development decision. Electronic here, but the same term is independently supported by mutant evidence elsewhere in this review.
GO:0019001 guanyl nucleotide binding
IEA
GO_REF:0000002
ACCEPT
Summary: Accept: guanyl nucleotide binding.
Reason: Parent of GTP binding; adds no specificity over GO:0005525 but is not incorrect for a G-domain protein.
GO:0031683 G-protein beta/gamma-subunit complex binding
IEA
GO_REF:0000002
ACCEPT
Summary: Accept: G-protein beta/gamma-subunit complex binding.
Reason: G-alpha/G-beta-gamma association is the interaction that builds the heterotrimer; in A. nidulans the partners are SfaD and GpgA, both curated as components of the same complex.
GO:0048315 conidium formation
IMP
PMID:8895563
The Aspergillus FlbA RGS domain protein antagonizes G protei...
MODIFY
Summary: Direction should be signed. FadA signaling represses conidiation rather than driving conidium formation.
Reason: The unsigned term loses the demonstrated direction. Constitutive FadA signaling (fadA(G42R)) blocks sporulation, while loss of fadA leaves sporulation intact and the dominant-interfering allele is a hyperactive sporulator, so FadA is a negative regulator of conidium formation.
Supporting Evidence:
PMID:8895563
activation of this pathway leads to proliferation and blocks sporulation
PMID:8895563
a fadA deletion and a fadA dominant-interfering mutation (fadA(G203R)) resulted in reduced growth without impairing sporulation
GO:0010913 regulation of sterigmatocystin biosynthetic process
IMP
PMID:9305634
Aspergillus sporulation and mycotoxin production both requir...
KEEP AS NON CORE
Summary: Non-core regulatory role in sterigmatocystin biosynthesis.
Reason: FadA modulates ST via G-protein signaling; pleiotropic non-core role.
GO:0010913 regulation of sterigmatocystin biosynthetic process
IMP
PMID:9339347
Dominant mutations affecting both sporulation and sterigmato...
KEEP AS NON CORE
Summary: Non-core regulatory role in sterigmatocystin biosynthesis.
Reason: Duplicate ST-regulation role; non-core.
GO:0044550 secondary metabolite biosynthetic process
IMP
PMID:9339347
Dominant mutations affecting both sporulation and sterigmato...
MARK AS OVER ANNOTATED
Summary: Over-annotated: FadA regulates secondary metabolism, it is not a biosynthetic enzyme.
Reason: FadA is a signaling G-alpha subunit, not a biosynthetic enzyme; the biosynthetic-process annotation overstates its role.
GO:0045461 sterigmatocystin biosynthetic process
IMP
PMID:9305634
Aspergillus sporulation and mycotoxin production both requir...
MARK AS OVER ANNOTATED
Summary: Over-annotated: regulator of sterigmatocystin, not part of the biosynthetic pathway.
Reason: This subunit influences sterigmatocystin only via G-protein signaling (regulatory); the biosynthetic-process annotation overstates the role. The regulation term is more accurate.
GO:1900376 regulation of secondary metabolite biosynthetic process
IMP
PMID:9339347
Dominant mutations affecting both sporulation and sterigmato...
KEEP AS NON CORE
Summary: Non-core secondary-metabolite regulatory role.
Reason: Regulatory reach over secondary metabolism; non-core.
GO:0042318 penicillin biosynthetic process
IMP
PMID:11069688
G-protein signalling mediates differential production of tox...
MARK AS OVER ANNOTATED
Summary: Over-annotated: FadA regulates penicillin production, it is not a biosynthetic enzyme.
Reason: FadA affects penicillin biosynthesis via signaling; the regulation term is accurate.
GO:1900198 positive regulation of penicillin biosynthetic process
IMP
PMID:11069688
G-protein signalling mediates differential production of tox...
KEEP AS NON CORE
Summary: Non-core regulation of penicillin biosynthesis.
Reason: Pleiotropic secondary-metabolism regulatory role.
GO:0007165 signal transduction
IMP
PMID:8895563
The Aspergillus FlbA RGS domain protein antagonizes G protei...
ACCEPT
Summary: Accept: signal transduction.
Reason: Mutational evidence that altering fadA activity changes the growth-versus-sporulation output, which is a signalling readout. The term is general, but the specific GPCR-pathway term is annotated separately from the same evidence.
GO:0000909 sporocarp development involved in sexual reproduction
IMP
PMID:10523303
The Aspergillus nidulans sfaD gene encodes a G protein beta ...
KEEP AS NON CORE
Summary: Non-core role in sexual (sporocarp) development.
Reason: FadA signaling also influences sexual development; non-core relative to its growth/conidiation-control function.
GO:0075306 regulation of conidium formation
IMP
PMID:8895563
The Aspergillus FlbA RGS domain protein antagonizes G protei...
ACCEPT
Summary: Core process. FadA regulates conidium formation.
Reason: Active FadA represses conidiation; FadA is a key regulator of the growth/development switch.
Supporting Evidence:
PMID:8895563
This mutation is predicted to result in a loss of intrinsic GTPase activity leading to constitutive signaling, indicating that activation of this pathway leads to proliferation and blocks sporulation.
PMID:8895563
a fadA deletion and a fadA dominant-interfering mutation (fadA(G203R)) resulted in reduced growth without impairing sporulation
GO:0075306 regulation of conidium formation
IGI
PMID:8895563
The Aspergillus FlbA RGS domain protein antagonizes G protei...
ACCEPT
Summary: Core process. FadA regulates conidium formation (genetic interaction).
Reason: Genetic-interaction evidence supports FadA regulation of conidiation.
GO:0003924 GTPase activity
ISA
PMID:8895563
The Aspergillus FlbA RGS domain protein antagonizes G protei...
ACCEPT
Summary: Accept: GTPase activity.
Reason: Sequence-alignment evidence for the catalytic G domain, concordant with the nucleotide-cycle interpretation of the fadA alleles characterised in the same paper.
GO:0003924 GTPase activity
IMP
PMID:8895563
The Aspergillus FlbA RGS domain protein antagonizes G protei...
ACCEPT
Summary: Accept: GTPase activity.
Reason: Mutational support for a functioning GTPase cycle: the constitutively signalling and dominant-interfering fadA alleles behave as their predicted nucleotide states require.
GO:0005834 heterotrimeric G-protein complex
ISA
PMID:8895563
The Aspergillus FlbA RGS domain protein antagonizes G protei...
ACCEPT
Summary: Accept: heterotrimeric G-protein complex.
Reason: Sequence-based assignment of FadA to the G-alpha class and hence to the heterotrimer; concordant with the IBA and IEA rows for the same complex.
GO:0007186 G protein-coupled receptor signaling pathway
IMP
PMID:8895563
The Aspergillus FlbA RGS domain protein antagonizes G protei...
ACCEPT
Summary: Accept: G protein-coupled receptor signaling pathway.
Reason: The strongest form of this call: loss- and gain-of-signalling fadA alleles shift the balance between proliferation and sporulation, placing FadA inside the receptor-initiated pathway rather than merely resembling its components.
GO:0007186 G protein-coupled receptor signaling pathway
IGI
PMID:8895563
The Aspergillus FlbA RGS domain protein antagonizes G protei...
ACCEPT
Summary: Accept: G protein-coupled receptor signaling pathway.
Reason: Genetic-interaction support from the flbA/fadA relationship, which is the interaction that defines this pathway; an independent evidence line for the term already carried by the IMP row.
GO:0019001 guanyl nucleotide binding
IMP
PMID:8895563
The Aspergillus FlbA RGS domain protein antagonizes G protei...
ACCEPT
Summary: Accept: guanyl nucleotide binding.
Reason: Inferred from alleles whose phenotypes track nucleotide state rather than from a direct binding assay. Weaker than the IEA G-domain calls it duplicates, but concordant with them.

Core Functions

Alpha subunit of the principal heterotrimeric G protein: GTP-bound FadA drives vegetative proliferation and represses conidiation and secondary metabolism; its activity, antagonized by the RGS protein FlbA, sets the balance between growth and asexual development.

Supporting Evidence:
  • PMID:8895563
    This mutation is predicted to result in a loss of intrinsic GTPase activity leading to constitutive signaling, indicating that activation of this pathway leads to proliferation and blocks sporulation.
  • PMID:8895563
    a fadA deletion and a fadA dominant-interfering mutation (fadA(G203R)) resulted in reduced growth without impairing sporulation

References

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Notes

(fadA-notes.md)

fadA (Aspergillus nidulans) β€” curation notes

UniProt Q00743 (GPA1_EMENI / FadA). G-alpha subunit; repressive gating tier of the conidiation_regulatory_cascade module.
- Active (GTP-bound) FadA drives proliferation and represses conidiation; antagonized by the RGS protein FlbA. PMID:8895563.
- Core MF GO:0003925 G protein activity; in heterotrimeric G-protein complex (GO:0005834).
- Over-annotations flagged: GO:0045461 ST biosynthetic process, GO:0044550 secondary metabolite biosynthetic process, GO:0042318 penicillin biosynthetic process (FadA is a signaling subunit, not a biosynthetic enzyme β†’ regulation terms).

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