laeA

UniProt ID: C8VQG9
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Review Status: DRAFT
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Gene Description

laeA is a nuclear, SAM-dependent methyltransferase (velvet-complex subunit) that acts as a global regulator of secondary metabolism in Aspergillus nidulans and related Aspergilli. Deletion of laeA blocks expression of diverse secondary-metabolite gene clusters (sterigmatocystin, penicillin, lovastatin), while overexpression increases them; LaeA acts at the level of chromatin/cluster activation. Biochemically LaeA is a methyltransferase that undergoes automethylation generating S-methylmethionine; it forms the VelB-VeA-LaeA velvet complex, coupling development (including sexual sporulation) to secondary metabolism, and contributes to chemical defense/virulence via the metabolites it controls.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0008168 methyltransferase activity
IBA
GO_REF:0000033
ACCEPT
Summary: Core molecular function. LaeA is a methyltransferase.
Reason: SAM-dependent methyltransferase; concordant with IDA evidence (PMID:23532849).
GO:0005634 nucleus
IEA
GO_REF:0000044
ACCEPT
Summary: Nuclear localization (UniProt mapping).
Reason: Consistent with experimentally determined nuclear localization.
GO:0008168 methyltransferase activity
IDA
PMID:23532849
A novel automethylation reaction in the Aspergillus nidulans...
ACCEPT
Summary: Core molecular function (direct). Methyltransferase activity.
Reason: Biochemical demonstration of a methyltransferase reaction: LaeA automethylates a methionine residue to generate S-methylmethionine. Note the scope limit β€” the same study failed to find any methyl-accepting substrate, so the demonstrated activity is automethylation rather than trans-methylation of a partner protein.
Supporting Evidence:
PMID:23532849
LaeA is the first protein to exhibit automethylation at a methionine residue.
PMID:23532849
However, in each experiment LaeA was shown to self-methylate.
GO:0030437 ascospore formation
IMP
PMID:20935144
Suppressor mutagenesis identifies a velvet complex remediato...
KEEP AS NON CORE
Summary: LaeA promotes ascospore (sexual) formation (developmental role).
Reason: LaeA, via the velvet complex, promotes sexual development; a real but non-core role relative to its SM-regulation function.
GO:0030437 ascospore formation
IMP
PMID:21152013
LaeA control of velvet family regulatory proteins for light-...
KEEP AS NON CORE
Summary: LaeA promotes ascospore formation (duplicate).
Reason: Velvet-complex-dependent developmental role; non-core.
Supporting Evidence:
PMID:21152013
In the dark, VeA bridges VelB and LaeA to form the VelB-VeA-LaeA (velvet) complex
GO:0045460 sterigmatocystin metabolic process
IMP
PMID:15075281
LaeA, a regulator of secondary metabolism in Aspergillus spp...
KEEP AS NON CORE
Summary: LaeA regulates sterigmatocystin metabolism (regulatory reach).
Reason: LaeA controls the ST gene cluster; annotated here to the metabolic process via acts_upstream_of_or_within. The precise role is regulatory (see GO:0010914); kept as non-core to avoid duplicating the regulation term.
Supporting Evidence:
PMID:15075281
Deletion of laeA (DeltalaeA) blocks the expression of metabolic gene clusters, including the sterigmatocystin (carcinogen), penicillin (antibiotic), and lovastatin (antihypercholesterolemic agent) gene clusters
GO:0045460 sterigmatocystin metabolic process
IMP
PMID:18556559
VelB/VeA/LaeA complex coordinates light signal with fungal d...
KEEP AS NON CORE
Summary: LaeA regulates ST metabolism (duplicate).
Reason: Regulatory reach over the ST cluster; non-core relative to GO:0010914.
GO:0010914 positive regulation of sterigmatocystin biosynthetic process
IMP
PMID:18556559
VelB/VeA/LaeA complex coordinates light signal with fungal d...
ACCEPT
Summary: Core process. LaeA positively regulates sterigmatocystin biosynthesis.
Reason: Deletion of laeA blocks ST cluster expression; overexpression increases it.
Supporting Evidence:
PMID:15075281
Deletion of laeA (DeltalaeA) blocks the expression of metabolic gene clusters, including the sterigmatocystin (carcinogen), penicillin (antibiotic), and lovastatin (antihypercholesterolemic agent) gene clusters
GO:0042316 penicillin metabolic process
IMP
PMID:15075281
LaeA, a regulator of secondary metabolism in Aspergillus spp...
KEEP AS NON CORE
Summary: LaeA regulates penicillin metabolism (regulatory reach).
Reason: LaeA controls the penicillin cluster; the metabolic-process annotation reflects regulatory reach, captured precisely by GO:0033246.
Supporting Evidence:
PMID:15075281
Deletion of laeA (DeltalaeA) blocks the expression of metabolic gene clusters, including the sterigmatocystin (carcinogen), penicillin (antibiotic), and lovastatin (antihypercholesterolemic agent) gene clusters
GO:1900376 regulation of secondary metabolite biosynthetic process
IMP
PMID:15075281
LaeA, a regulator of secondary metabolism in Aspergillus spp...
ACCEPT
Summary: Core process. LaeA is a global regulator of secondary-metabolite biosynthesis.
Reason: LaeA regulates expression of multiple secondary-metabolite gene clusters; this is its central function.
Supporting Evidence:
PMID:15075281
We present here a novel Aspergillus nuclear protein, LaeA, as a global regulator of secondary metabolism in this genus
GO:0075296 positive regulation of ascospore formation
IMP
PMID:21152013
LaeA control of velvet family regulatory proteins for light-...
KEEP AS NON CORE
Summary: LaeA positively regulates ascospore formation (developmental).
Reason: Velvet-complex-dependent sexual-development role; non-core.
GO:0075296 positive regulation of ascospore formation
IMP
PMID:20935144
Suppressor mutagenesis identifies a velvet complex remediato...
KEEP AS NON CORE
Summary: LaeA positively regulates ascospore formation (duplicate).
Reason: Non-core developmental role.
GO:0051701 biological process involved in interaction with host
IMP
PMID:17686752
Secondary chemicals protect mould from fungivory.
KEEP AS NON CORE
Summary: LaeA affects fungus-fungivore interaction via secondary metabolites (loose term fit).
Reason: Loss of LaeA-controlled secondary metabolites reduces protection against fungivory; the term 'interaction with host' is a loose fit (the springtail is a predator, not a host), so kept as a non-core, indirect ecological role.
GO:0005634 nucleus
IDA
PMID:18556559
VelB/VeA/LaeA complex coordinates light signal with fungal d...
ACCEPT
Summary: Nuclear localization (direct).
Reason: Direct assay; consistent with LaeA nuclear function.
GO:0008168 methyltransferase activity
IMP
PMID:16968230
Secondary metabolic gene cluster silencing in Aspergillus ni...
ACCEPT
Summary: Core molecular function (IMP). Methyltransferase activity.
Reason: Point-mutation of the SAM-binding motif abolishes LaeA function, supporting a methyltransferase activity requirement.
GO:0005634 nucleus
IDA
PMID:15075281
LaeA, a regulator of secondary metabolism in Aspergillus spp...
ACCEPT
Summary: Nuclear localization (direct).
Reason: Direct assay from the founding LaeA characterization.
GO:0010914 positive regulation of sterigmatocystin biosynthetic process
IMP
PMID:15075281
LaeA, a regulator of secondary metabolism in Aspergillus spp...
ACCEPT
Summary: Core process (duplicate). Positive regulation of sterigmatocystin biosynthesis.
Reason: Consistent with LaeA's control of the ST cluster.
Supporting Evidence:
PMID:15075281
Deletion of laeA (DeltalaeA) blocks the expression of metabolic gene clusters, including the sterigmatocystin (carcinogen), penicillin (antibiotic), and lovastatin (antihypercholesterolemic agent) gene clusters
GO:0033246 positive regulation of penicillin metabolic process
IMP
PMID:15075281
LaeA, a regulator of secondary metabolism in Aspergillus spp...
ACCEPT
Summary: Core process. LaeA positively regulates penicillin biosynthesis.
Reason: LaeA is required for expression of the penicillin biosynthetic cluster.
Supporting Evidence:
PMID:15075281
Deletion of laeA (DeltalaeA) blocks the expression of metabolic gene clusters, including the sterigmatocystin (carcinogen), penicillin (antibiotic), and lovastatin (antihypercholesterolemic agent) gene clusters

Core Functions

Nuclear SAM-dependent methyltransferase and global regulator of secondary metabolism: LaeA controls activation of diverse secondary-metabolite gene clusters (sterigmatocystin, penicillin, lovastatin) and, as part of the VelB-VeA-LaeA velvet complex, couples secondary metabolism to development. A specific physiological methylation substrate beyond automethylation remains under investigation.

Supporting Evidence:
  • PMID:15075281
    We present here a novel Aspergillus nuclear protein, LaeA, as a global regulator of secondary metabolism in this genus
  • PMID:23532849
    LaeA is the first protein to exhibit automethylation at a methionine residue.
  • PMID:23532849
    However, in each experiment LaeA was shown to self-methylate.

References

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Notes

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