mcr1

UniProt ID: Q5BG98
Organism: Aspergillus nidulans FGSC A4
Review Status: COMPLETE
πŸ“ Provide Detailed Feedback

Gene Description

Aspergillus nidulans mcr1 encodes the MCR1-like member of the fungal NADH-cytochrome b5 reductase family. The protein has the conserved cytochrome-b5 reductase FAD- and NADH-binding regions and a predicted N-terminal transmembrane segment, and is inferred to act as a mitochondrial NADH-dependent cytochrome-b5 reductase.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0004128 cytochrome-b5 reductase activity, acting on NAD(P)H
IBA
GO_REF:0000033
TOO GENERAL
Summary: PTN000452207 supports a broad cytochrome-b5 reductase activity at a eukaryotic node, but the NADH-specific child is already captured by the target's Rhea/EC row.
Reason: PTN000452207 places a molecular-function assertion at a broad eukaryotic node seeded by characterized S. cerevisiae MCR1 and by S. cerevisiae PGA3, a plasma-membrane-associated coenzyme-Q6 reductase in the same PTHR19370:SF143 subfamily as AIM33. The node can support only the NAD(P)H-dependent GO:0004128 parent, while A. nidulans mcr1 is separately mapped to EC 1.6.2.2 and the NADH-dependent Rhea reaction used for GO:0090524; the broad GO:0004128 claim is therefore true but entailed by the accepted NADH-specific child term for this target.
Propagation Review
Root cause: NO FAILURE NON CORE
Sources checked:
PANTHER:PTN000452207 Β· PANTHER:PTN000452207 SUPPORTS TRANSFER
PTN000452207 carries a conserved cytochrome-b5 reductase parent term that A. nidulans mcr1 can inherit as an ancestor of the more precise target-specific Rhea/EC row.
Supporting Evidence:
file:interpro/panther/PTHR19370/PTHR19370-paint.tsv
PTHR19370 PTN000452207 GO:0004128 F IBD false
file:genes/EMENI/mcr1/mcr1-uniprot.txt
Reaction=2 Fe(III)-[cytochrome b5] + NADH = 2 Fe(II)-[cytochrome b5] + NAD(+) + H(+); Xref=Rhea:RHEA:46680
GO:0005739 mitochondrion
IBA
GO_REF:0000033
ACCEPT
Summary: PTN000452207 places the MCR1-like subfamily in mitochondria and is consistent with the characterized mitochondrial S. cerevisiae Mcr1 ortholog.
Reason: A. nidulans mcr1 sits in PTHR19370:SF171 with S. cerevisiae MCR1, whose product is experimentally sorted to two submitochondrial compartments; PAINT placed the mitochondrion assertion at a eukaryotic node seeded by S. cerevisiae MCR1. The inferred mitochondrial outer-membrane localization on the A. nidulans UniProt record makes mitochondrion the right activity-site granularity for this IBA.
Propagation Review
Root cause: NO FAILURE CORE
Sources checked:
PANTHER:PTN000452207 Β· PANTHER:PTN000452207 SUPPORTS TRANSFER
This node covers the A. nidulans mcr1 subfamily and carries the mitochondrial localization inherited from experimentally characterized S. cerevisiae MCR1.
Supporting Evidence:
file:interpro/panther/PTHR19370/PTHR19370-paint.tsv
PTHR19370 PTN000452207 GO:0005739 C IBD false
PMID:8001120
The S. cerevisiae gene MCR1 encodes two mitochondrial isoforms of
GO:0005741 mitochondrial outer membrane
IEA
GO_REF:0000044
ACCEPT
Summary: The UniProt subcellular-location transfer to the mitochondrial outer membrane matches the N-terminally anchored MCR1 family member.
Reason: The A. nidulans Swiss-Prot record infers a single-pass mitochondrial outer-membrane protein, and the S. cerevisiae ortholog has an experimentally characterized outer-membrane isoform. This is the most specific localization currently available for A. nidulans mcr1.
Supporting Evidence:
file:genes/EMENI/mcr1/mcr1-uniprot.txt
SUBCELLULAR LOCATION: Mitochondrion outer membrane {ECO:0000250};
PMID:8001120
This precursor protein is inserted into the outer membrane
GO:0006696 ergosterol biosynthetic process
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: PTN000452208 propagates an inherited S. cerevisiae MCR1 ergosterol-biosynthesis assertion, but no A. nidulans evidence currently makes the process a core mcr1 function.
Reason: The PAINT assertion comes from an S. cerevisiae MCR1 seed and A. nidulans mcr1 is in the same MCR1-like branch, so the IBA is retained as an in-clade inherited process annotation. It is not promoted to a core A. nidulans mcr1 function here because mcr1 has not been assayed in A. nidulans, and the available CYP51 reconstitution evidence used the microsomal cytochrome-b5/NADH-cytochrome-b5-reductase system that corresponds to the ER CBR1 paralog branch rather than this mitochondrial MCR1 branch.
Propagation Review
Root cause: NO FAILURE NON CORE
Sources checked:
PANTHER:PTN000452208 Β· PANTHER:PTN000452208 SUPPORTS TRANSFER
This node propagates the ergosterol-biosynthesis assertion from an S. cerevisiae MCR1 source to an in-clade A. nidulans target, but A. nidulans mcr1 lacks direct process evidence.
Supporting Evidence:
file:interpro/panther/PTHR19370/PTHR19370-paint.tsv
PTHR19370 PTN000452208 GO:0006696 P IBD false
GO:0016491 oxidoreductase activity
IEA
GO_REF:0000120
TOO GENERAL
Summary: The ARBA/InterPro method correctly detects a pyridine nucleotide cytochrome reductase, but its oxidoreductase parent is less informative than the Rhea-supported cytochrome-b5 reductase child.
Reason: mcr1 has the conserved CBR-like domains and its UniProt record already maps the protein to the NADH:cytochrome-b5 oxidoreductase reaction. The broad GO:0016491 parent loses the electron donor and acceptor specificity and is entailed by GO:0090524 on this protein.
Supporting Evidence:
file:genes/EMENI/mcr1/mcr1-uniprot.txt
InterPro; IPR001834; CBR-like.
GO:0090524 cytochrome-b5 reductase activity, acting on NADH
IEA
GO_REF:0000120
ACCEPT
Summary: The Rhea/EC mapping captures the expected NADH-dependent cytochrome-b5 reductase activity for A. nidulans mcr1.
Reason: EC 1.6.2.2 and RHEA:46680 specify reduction of ferricytochrome b5 using NADH. This is the precise molecular-function term for mcr1's conserved cytochrome-b5 reductase domains and should replace the broader GO:0016491 parent term.
Supporting Evidence:
file:genes/EMENI/mcr1/mcr1-uniprot.txt
Reaction=2 Fe(III)-[cytochrome b5] + NADH = 2 Fe(II)-[cytochrome b5] + NAD(+) + H(+); Xref=Rhea:RHEA:46680

Core Functions

Predicted FAD-dependent reduction of ferricytochrome b5 using NADH as electron donor in a mitochondrial MCR1-clade protein.

Supporting Evidence:
  • file:interpro/panther/PTHR19370/PTHR19370-paint.tsv
    PTHR19370 PTN000452207 GO:0004128 F IBD false
  • file:genes/EMENI/mcr1/mcr1-uniprot.txt
    Reaction=2 Fe(III)-[cytochrome b5] + NADH = 2 Fe(II)-[cytochrome b5] + NAD(+) + H(+); Xref=Rhea:RHEA:46680

References

Loading supporting content…

Download this section (compressed HTML)

πŸ“š Additional Documentation

Notes

(mcr1-notes.md)

Loading supporting content…

Download this section (compressed HTML)

πŸ“„ View Raw YAML

Loading supporting content…

Download this section (compressed HTML)